data_NGI # _chem_comp.id NGI _chem_comp.name ;2-[P-(2-CARBOXYETHYL)PHENYLETHYL-AMINO]-5'-N-ETHYLCARBOXAMIDO ADENOSINE ; _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H29 N7 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2015-03-23 _chem_comp.pdbx_modified_date 2015-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 499.520 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NGI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 4UG2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NGI C1 C1 C 0 1 N N N -0.049 -18.689 28.708 -11.102 2.067 0.201 C1 NGI 1 NGI N1 N1 N 0 1 N N N -2.342 -18.432 27.844 -8.799 1.269 0.396 N1 NGI 2 NGI O1 O1 O 0 1 N N N -3.388 -19.747 26.322 -8.100 -0.817 0.683 O1 NGI 3 NGI C2 C2 C 0 1 N N N -1.291 -19.376 28.189 -10.201 0.845 0.389 C2 NGI 4 NGI N2 N2 N 0 1 Y N N -5.248 -18.287 23.430 -3.383 -1.122 0.074 N2 NGI 5 NGI O2 O2 O 0 1 N N N -3.934 -17.217 25.114 -5.513 -0.336 0.818 O2 NGI 6 NGI C3 C3 C 0 1 N N N -3.240 -18.670 26.885 -7.820 0.356 0.550 C3 NGI 7 NGI N3 N3 N 0 1 Y N N -4.827 -20.200 22.421 -2.822 -3.189 -0.348 N3 NGI 8 NGI O3 O3 O 0 1 N N N -6.756 -15.993 25.832 -3.615 1.908 -1.158 O3 NGI 9 NGI C4 C4 C 0 1 N N S -4.107 -17.516 26.505 -6.377 0.791 0.558 C4 NGI 10 NGI N4 N4 N 0 1 N N N -6.112 -20.977 19.822 0.096 -4.117 -0.589 N4 NGI 11 NGI O4 O4 O 0 1 N N N -6.064 -17.452 27.948 -6.014 2.721 -0.898 O4 NGI 12 NGI C5 C5 C 0 1 N N R -5.192 -17.178 24.429 -4.214 0.058 0.323 C5 NGI 13 NGI N5 N5 N 0 1 Y N N -7.206 -18.901 19.929 0.597 -1.854 -0.161 N5 NGI 14 NGI O5 O5 O 0 1 N N N -13.844 -21.568 11.681 12.325 1.641 0.184 O5 NGI 15 NGI C6 C6 C 0 1 N N R -6.271 -17.300 25.500 -4.504 0.801 -1.000 C6 NGI 16 NGI N6 N6 N 0 1 N N N -8.312 -16.803 20.048 1.200 0.361 0.269 N6 NGI 17 NGI O6 O6 O 0 1 N N N -11.704 -21.594 11.163 11.695 -0.439 -0.219 O6 NGI 18 NGI C7 C7 C 0 1 N N S -5.559 -17.908 26.691 -5.960 1.294 -0.842 C7 NGI 19 NGI N7 N7 N 0 1 Y N N -6.835 -17.446 21.736 -1.047 -0.257 0.200 N7 NGI 20 NGI C8 C8 C 0 1 Y N N -4.553 -19.433 23.497 -3.831 -2.387 -0.171 C8 NGI 21 NGI C9 C9 C 0 1 Y N N -5.712 -19.521 21.665 -1.666 -2.490 -0.236 C9 NGI 22 NGI C10 C10 C 0 1 Y N N -6.349 -19.804 20.460 -0.301 -2.818 -0.329 C10 NGI 23 NGI C11 C11 C 0 1 Y N N -7.453 -17.723 20.562 0.224 -0.608 0.103 C11 NGI 24 NGI C12 C12 C 0 1 N N N -8.838 -16.895 18.698 2.616 0.002 0.153 C12 NGI 25 NGI C13 C13 C 0 1 N N N -10.139 -17.690 18.632 3.478 1.246 0.378 C13 NGI 26 NGI C14 C14 C 0 1 Y N N -10.447 -18.170 17.229 4.934 0.877 0.258 C14 NGI 27 NGI C15 C15 C 0 1 Y N N -9.785 -19.280 16.693 5.565 0.945 -0.970 C15 NGI 28 NGI C16 C16 C 0 1 Y N N -10.083 -19.723 15.402 6.901 0.606 -1.080 C16 NGI 29 NGI C17 C17 C 0 1 Y N N -11.051 -19.053 14.643 7.605 0.198 0.038 C17 NGI 30 NGI C18 C18 C 0 1 N N N -11.385 -19.522 13.243 9.061 -0.171 -0.083 C18 NGI 31 NGI C19 C19 C 0 1 N N N -12.427 -20.640 13.343 9.923 1.072 0.143 C19 NGI 32 NGI C20 C20 C 0 1 N N N -12.696 -21.295 12.004 11.379 0.702 0.023 C20 NGI 33 NGI C21 C21 C 0 1 Y N N -11.713 -17.944 15.180 6.974 0.130 1.265 C21 NGI 34 NGI C22 C22 C 0 1 Y N N -11.413 -17.505 16.471 5.640 0.475 1.377 C22 NGI 35 NGI C23 C23 C 0 1 Y N N -5.969 -18.318 22.303 -2.012 -1.157 0.039 C23 NGI 36 NGI H1 H1 H 0 1 N N N 0.713 -19.444 28.954 -12.146 1.752 0.195 H1 NGI 37 NGI H1A H1A H 0 1 N N N 0.343 -18.010 27.937 -10.939 2.769 1.019 H1A NGI 38 NGI H1B H1B H 0 1 N N N -0.299 -18.113 29.611 -10.864 2.552 -0.746 H1B NGI 39 NGI HN1 HN1 H 0 1 N N N -2.394 -17.569 28.346 -8.575 2.207 0.290 HN1 NGI 40 NGI H2 H2 H 0 1 N N N -1.026 -19.954 27.291 -10.439 0.361 1.336 H2 NGI 41 NGI H2A H2A H 0 1 N N N -1.669 -20.057 28.966 -10.365 0.144 -0.429 H2A NGI 42 NGI HO3 HO3 H 0 1 N N N -7.429 -16.064 26.499 -3.753 2.410 -1.973 HO3 NGI 43 NGI H4 H4 H 0 1 N N N -3.872 -16.642 27.130 -6.220 1.570 1.305 H4 NGI 44 NGI HN4 HN4 H 0 1 N N N -6.648 -21.013 18.979 1.040 -4.332 -0.651 HN4 NGI 45 NGI HN4A HN4A H 0 0 N N N -5.139 -21.046 19.601 -0.568 -4.813 -0.710 HN4A NGI 46 NGI HO4 HO4 H 0 1 N N N -6.974 -17.711 28.037 -6.896 3.088 -0.745 HO4 NGI 47 NGI H5 H5 H 0 1 N N N -5.312 -16.215 23.911 -3.724 0.724 1.034 H5 NGI 48 NGI HO5 HO5 H 0 1 N N N -13.843 -21.977 10.824 13.245 1.356 0.098 HO5 NGI 49 NGI H6 H6 H 0 1 N N N -7.080 -17.960 25.156 -4.419 0.120 -1.847 H6 NGI 50 NGI HN6 HN6 H 0 1 N N N -7.841 -15.922 20.103 0.947 1.276 0.463 HN6 NGI 51 NGI H7 H7 H 0 1 N N N -5.640 -19.003 26.630 -6.597 0.856 -1.610 H7 NGI 52 NGI H8 H8 H 0 1 N N N -3.875 -19.702 24.294 -4.870 -2.680 -0.213 H8 NGI 53 NGI H12 H12 H 0 1 N N N -9.026 -15.878 18.322 2.863 -0.752 0.901 H12 NGI 54 NGI H12A H12A H 0 0 N N N -8.090 -17.389 18.061 2.808 -0.398 -0.843 H12A NGI 55 NGI H13 H13 H 0 1 N N N -10.054 -18.564 19.294 3.231 1.999 -0.370 H13 NGI 56 NGI H13A H13A H 0 0 N N N -10.964 -17.048 18.976 3.285 1.645 1.374 H13A NGI 57 NGI H15 H15 H 0 1 N N N -9.040 -19.797 17.280 5.015 1.263 -1.843 H15 NGI 58 NGI H16 H16 H 0 1 N N N -9.569 -20.579 14.991 7.394 0.659 -2.039 H16 NGI 59 NGI H18 H18 H 0 1 N N N -11.794 -18.685 12.658 9.307 -0.925 0.665 H18 NGI 60 NGI H18A H18A H 0 0 N N N -10.477 -19.903 12.752 9.253 -0.571 -1.078 H18A NGI 61 NGI H19 H19 H 0 1 N N N -12.060 -21.404 14.044 9.677 1.826 -0.605 H19 NGI 62 NGI H19A H19A H 0 0 N N N -13.367 -20.215 13.724 9.731 1.472 1.139 H19A NGI 63 NGI H21 H21 H 0 1 N N N -12.458 -17.426 14.594 7.524 -0.188 2.139 H21 NGI 64 NGI H22 H22 H 0 1 N N N -11.928 -16.650 16.884 5.146 0.422 2.336 H22 NGI 65 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NGI C2 C1 SING N N 1 NGI C1 H1 SING N N 2 NGI C1 H1A SING N N 3 NGI C1 H1B SING N N 4 NGI C3 N1 SING N N 5 NGI N1 C2 SING N N 6 NGI N1 HN1 SING N N 7 NGI O1 C3 DOUB N N 8 NGI C2 H2 SING N N 9 NGI C2 H2A SING N N 10 NGI C23 N2 SING Y N 11 NGI N2 C8 SING Y N 12 NGI N2 C5 SING N N 13 NGI C5 O2 SING N N 14 NGI O2 C4 SING N N 15 NGI C4 C3 SING N N 16 NGI C9 N3 SING Y N 17 NGI N3 C8 DOUB Y N 18 NGI C6 O3 SING N N 19 NGI O3 HO3 SING N N 20 NGI C4 C7 SING N N 21 NGI C4 H4 SING N N 22 NGI N4 C10 SING N N 23 NGI N4 HN4 SING N N 24 NGI N4 HN4A SING N N 25 NGI C7 O4 SING N N 26 NGI O4 HO4 SING N N 27 NGI C5 C6 SING N N 28 NGI C5 H5 SING N N 29 NGI N5 C10 DOUB Y N 30 NGI N5 C11 SING Y N 31 NGI O5 C20 SING N N 32 NGI O5 HO5 SING N N 33 NGI C6 C7 SING N N 34 NGI C6 H6 SING N N 35 NGI C12 N6 SING N N 36 NGI N6 C11 SING N N 37 NGI N6 HN6 SING N N 38 NGI O6 C20 DOUB N N 39 NGI C7 H7 SING N N 40 NGI C11 N7 DOUB Y N 41 NGI N7 C23 SING Y N 42 NGI C8 H8 SING N N 43 NGI C10 C9 SING Y N 44 NGI C9 C23 DOUB Y N 45 NGI C13 C12 SING N N 46 NGI C12 H12 SING N N 47 NGI C12 H12A SING N N 48 NGI C14 C13 SING N N 49 NGI C13 H13 SING N N 50 NGI C13 H13A SING N N 51 NGI C22 C14 DOUB Y N 52 NGI C15 C14 SING Y N 53 NGI C16 C15 DOUB Y N 54 NGI C15 H15 SING N N 55 NGI C17 C16 SING Y N 56 NGI C16 H16 SING N N 57 NGI C18 C17 SING N N 58 NGI C17 C21 DOUB Y N 59 NGI C18 C19 SING N N 60 NGI C18 H18 SING N N 61 NGI C18 H18A SING N N 62 NGI C20 C19 SING N N 63 NGI C19 H19 SING N N 64 NGI C19 H19A SING N N 65 NGI C21 C22 SING Y N 66 NGI C21 H21 SING N N 67 NGI C22 H22 SING N N 68 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NGI InChI InChI 1.03 "InChI=1S/C23H29N7O6/c1-2-25-21(35)18-16(33)17(34)22(36-18)30-11-27-15-19(24)28-23(29-20(15)30)26-10-9-13-5-3-12(4-6-13)7-8-14(31)32/h3-6,11,16-18,22,33-34H,2,7-10H2,1H3,(H,25,35)(H,31,32)(H3,24,26,28,29)/t16-,17+,18-,22+/m0/s1" NGI InChIKey InChI 1.03 PAOANWZGLPPROA-RQXXJAGISA-N NGI SMILES_CANONICAL CACTVS 3.385 "CCNC(=O)[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)nc(NCCc4ccc(CCC(O)=O)cc4)nc23" NGI SMILES CACTVS 3.385 "CCNC(=O)[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)nc(NCCc4ccc(CCC(O)=O)cc4)nc23" NGI SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCNC(=O)[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2nc(nc3N)NCCc4ccc(cc4)CCC(=O)O)O)O" NGI SMILES "OpenEye OEToolkits" 1.7.6 "CCNC(=O)C1C(C(C(O1)n2cnc3c2nc(nc3N)NCCc4ccc(cc4)CCC(=O)O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NGI "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "3-[4-[2-[[6-azanyl-9-[(2R,3R,4S,5S)-5-(ethylcarbamoyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-2-yl]amino]ethyl]phenyl]propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NGI "Create component" 2015-03-23 EBI NGI "Initial release" 2015-04-08 RCSB #