data_NHL # _chem_comp.id NHL _chem_comp.name "(4S)-4-(2-NAPHTHYLMETHYL)-D-GLUTAMIC ACID" _chem_comp.type "D-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C16 H17 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "GAMMA-2-NAPHTHYLMETHYL-D-GLUTAMIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-01-18 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 287.310 _chem_comp.one_letter_code E _chem_comp.three_letter_code NHL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details "OpenEye/OEToolkits V1.4.2" _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code ? _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NHL C8 C8 C 0 1 Y N N 36.247 32.894 68.470 -3.349 -4.587 0.947 C8 NHL 1 NHL C7 C7 C 0 1 Y N N 34.978 32.374 68.082 -4.567 -5.019 0.422 C7 NHL 2 NHL C3 C3 C 0 1 Y N N 33.961 32.166 69.054 -5.042 -4.512 -0.798 C3 NHL 3 NHL C2 C2 C 0 1 Y N N 32.694 31.649 68.663 -6.266 -4.935 -1.341 C2 NHL 4 NHL C1 C1 C 0 1 Y N N 31.682 31.444 69.636 -6.723 -4.420 -2.555 C1 NHL 5 NHL C6 C6 C 0 1 Y N N 31.931 31.755 71.010 -5.964 -3.476 -3.241 C6 NHL 6 NHL C5 C5 C 0 1 Y N N 33.200 32.275 71.419 -4.746 -3.044 -2.716 C5 NHL 7 NHL C4 C4 C 0 1 Y N N 34.226 32.486 70.454 -4.271 -3.552 -1.496 C4 NHL 8 NHL C10 C10 C 0 1 Y N N 35.500 33.008 70.841 -3.047 -3.128 -0.953 C10 NHL 9 NHL C9 C9 C 0 1 Y N N 36.517 33.220 69.852 -2.606 -3.649 0.254 C9 NHL 10 NHL C11 C11 C 0 1 N N N 37.887 33.785 70.244 -1.287 -3.183 0.823 C11 NHL 11 NHL CG CG C 0 1 N N S 38.084 35.225 69.656 -1.351 -1.955 1.757 CG NHL 12 NHL CD CD C 0 1 N N N 39.453 35.325 68.952 -1.531 -0.674 0.952 CD NHL 13 NHL OE2 OE2 O 0 1 N N N 40.510 35.434 69.583 -2.704 -0.050 1.237 OE2 NHL 14 NHL OE1 OE1 O 0 1 N N N 39.511 35.299 67.619 -0.723 -0.230 0.147 OE1 NHL 15 NHL CB CB C 0 1 N N N 37.971 36.302 70.797 -0.130 -1.867 2.698 CB NHL 16 NHL CA CA C 0 1 N N R 38.147 37.796 70.417 -0.171 -0.698 3.699 CA NHL 17 NHL N N N 0 1 N N N 37.292 38.122 69.229 -1.286 -0.825 4.637 N NHL 18 NHL C C C 0 1 N N N 37.782 38.640 71.625 1.108 -0.680 4.513 C NHL 19 NHL OXT OXT O 0 1 N Y N 38.512 38.726 72.589 2.181 -0.480 3.703 OXT NHL 20 NHL O O O 0 1 N N N 36.611 39.278 71.589 1.197 -0.815 5.725 O NHL 21 NHL H8 H8 H 0 1 N N N 37.014 33.046 67.725 -3.000 -4.994 1.893 H8 NHL 22 NHL H7 H7 H 0 1 N N N 34.788 32.137 67.046 -5.143 -5.758 0.975 H7 NHL 23 NHL HC2 H2 H 0 1 N N N 32.503 31.413 67.627 -6.876 -5.672 -0.822 HC2 NHL 24 NHL H1 H1 H 0 1 N N N 30.721 31.052 69.338 -7.671 -4.756 -2.963 H1 NHL 25 NHL H6 H6 H 0 1 N N N 31.155 31.596 71.744 -6.320 -3.076 -4.185 H6 NHL 26 NHL H5 H5 H 0 1 N N N 33.379 32.507 72.458 -4.169 -2.305 -3.269 H5 NHL 27 NHL H10 H10 H 0 1 N N N 35.696 33.242 71.877 -2.443 -2.390 -1.479 H10 NHL 28 NHL H111 1H11 H 0 0 N N N 38.674 33.125 69.849 -0.608 -2.973 -0.014 H111 NHL 29 NHL H112 2H11 H 0 0 N N N 37.946 33.840 71.341 -0.821 -4.018 1.364 H112 NHL 30 NHL HG 1HG H 0 1 N N N 37.292 35.419 68.917 -2.245 -2.071 2.381 HG NHL 31 NHL HE2 HE2 H 0 1 N N N 41.238 35.485 68.975 -2.863 0.787 0.751 HE2 NHL 32 NHL HB3 1HB H 0 1 N N N 36.963 36.203 71.225 -0.032 -2.805 3.259 HB3 NHL 33 NHL HB2 2HB H 0 1 N N N 38.815 36.085 71.468 0.785 -1.784 2.095 HB2 NHL 34 NHL H15 H15 H 0 1 N N N 39.189 38.010 70.137 -0.260 0.267 3.187 H15 NHL 35 NHL H H H 0 1 N N N 36.337 38.195 69.515 -1.719 0.011 4.963 H NHL 36 NHL H2 NH2 H 0 1 N Y N 37.588 38.991 68.834 -1.436 -1.711 5.067 H2 NHL 37 NHL HXT HXT H 0 1 N Y N 38.110 39.287 73.242 3.021 -0.459 4.209 HXT NHL 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NHL C8 C7 DOUB Y N 1 NHL C8 C9 SING Y N 2 NHL C8 H8 SING N N 3 NHL C7 C3 SING Y N 4 NHL C7 H7 SING N N 5 NHL C3 C2 DOUB Y N 6 NHL C3 C4 SING Y N 7 NHL C2 C1 SING Y N 8 NHL C2 HC2 SING N N 9 NHL C1 C6 DOUB Y N 10 NHL C1 H1 SING N N 11 NHL C6 C5 SING Y N 12 NHL C6 H6 SING N N 13 NHL C5 C4 DOUB Y N 14 NHL C5 H5 SING N N 15 NHL C4 C10 SING Y N 16 NHL C10 C9 DOUB Y N 17 NHL C10 H10 SING N N 18 NHL C9 C11 SING N N 19 NHL C11 CG SING N N 20 NHL C11 H111 SING N N 21 NHL C11 H112 SING N N 22 NHL CG CD SING N N 23 NHL CG CB SING N N 24 NHL CG HG SING N N 25 NHL CD OE1 DOUB N N 26 NHL CD OE2 SING N N 27 NHL OE2 HE2 SING N N 28 NHL CB CA SING N N 29 NHL CB HB3 SING N N 30 NHL CB HB2 SING N N 31 NHL CA N SING N N 32 NHL CA C SING N N 33 NHL CA H15 SING N N 34 NHL N H SING N N 35 NHL N H2 SING N N 36 NHL C O DOUB N N 37 NHL C OXT SING N N 38 NHL OXT HXT SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NHL SMILES ACDLabs 10.04 "O=C(O)C(N)CC(C(=O)O)Cc2ccc1c(cccc1)c2" NHL SMILES_CANONICAL CACTVS 3.341 "N[C@H](C[C@H](Cc1ccc2ccccc2c1)C(O)=O)C(O)=O" NHL SMILES CACTVS 3.341 "N[CH](C[CH](Cc1ccc2ccccc2c1)C(O)=O)C(O)=O" NHL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1ccc2cc(ccc2c1)C[C@@H](C[C@H](C(=O)O)N)C(=O)O" NHL SMILES "OpenEye OEToolkits" 1.5.0 "c1ccc2cc(ccc2c1)CC(CC(C(=O)O)N)C(=O)O" NHL InChI InChI 1.03 "InChI=1S/C16H17NO4/c17-14(16(20)21)9-13(15(18)19)8-10-5-6-11-3-1-2-4-12(11)7-10/h1-7,13-14H,8-9,17H2,(H,18,19)(H,20,21)/t13-,14+/m0/s1" NHL InChIKey InChI 1.03 YDWIUFASTTZKNI-UONOGXRCSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NHL "SYSTEMATIC NAME" ACDLabs 10.04 "(4S)-4-(naphthalen-2-ylmethyl)-D-glutamic acid" NHL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,4S)-2-amino-4-(naphthalen-2-ylmethyl)pentanedioic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NHL "Create component" 2007-01-18 RCSB NHL "Modify descriptor" 2011-06-04 RCSB NHL "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id NHL _pdbx_chem_comp_synonyms.name "GAMMA-2-NAPHTHYLMETHYL-D-GLUTAMIC ACID" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##