data_NJW # _chem_comp.id NJW _chem_comp.name "5-[(2~{S},3~{R})-3-[(~{R})-azanyl(phenyl)methyl]-2-(4-nitrophenyl)-4,5-bis(oxidanylidene)pyrrolidin-1-yl]-2-oxidanyl-benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H17 N3 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-12-02 _chem_comp.pdbx_modified_date 2020-04-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 459.408 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NJW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6TL3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NJW C19 C1 C 0 1 N N N 32.402 17.044 11.736 -5.758 -0.009 0.045 C19 NJW 1 NJW C17 C2 C 0 1 Y N N 33.225 13.307 12.687 -2.785 -1.514 -1.705 C17 NJW 2 NJW C14 C3 C 0 1 Y N N 32.777 15.727 12.595 -4.375 -0.240 -0.412 C14 NJW 3 NJW C18 C4 C 0 1 Y N N 33.428 13.392 14.077 -1.770 -0.688 -1.268 C18 NJW 4 NJW C15 C5 C 0 1 Y N N 32.876 14.460 11.788 -4.089 -1.299 -1.284 C15 NJW 5 NJW C12 C6 C 0 1 Y N N 33.326 14.639 14.810 -2.045 0.363 -0.397 C12 NJW 6 NJW C10 C7 C 0 1 N N R 32.651 14.068 17.555 0.402 1.071 -0.337 C10 NJW 7 NJW C22 C8 C 0 1 N N N 34.533 15.511 17.020 -1.146 2.237 0.878 C22 NJW 8 NJW O23 O1 O 0 1 N N N 35.451 16.219 16.610 -2.195 2.601 1.371 O23 NJW 9 NJW C02 C9 C 0 1 N N N 32.778 14.355 20.148 2.495 2.451 0.315 C02 NJW 10 NJW C03 C10 C 0 1 Y N N 31.498 13.337 20.312 3.353 1.708 -0.627 C03 NJW 11 NJW C04 C11 C 0 1 Y N N 30.245 13.803 20.835 2.975 1.574 -1.966 C04 NJW 12 NJW C05 C12 C 0 1 Y N N 29.126 12.930 20.976 3.783 0.878 -2.840 C05 NJW 13 NJW C06 C13 C 0 1 Y N N 29.224 11.565 20.577 4.965 0.312 -2.395 C06 NJW 14 NJW C07 C14 C 0 1 Y N N 30.446 11.077 20.040 5.346 0.440 -1.070 C07 NJW 15 NJW C08 C15 C 0 1 Y N N 31.564 11.958 19.909 4.551 1.138 -0.186 C08 NJW 16 NJW C09 C16 C 0 1 N N N 33.145 14.671 18.871 1.139 2.180 0.377 C09 NJW 17 NJW C13 C17 C 0 1 Y N N 32.984 15.786 13.966 -3.341 0.585 0.036 C13 NJW 18 NJW C24 C18 C 0 1 N N N 34.400 15.382 18.533 0.174 2.881 1.113 C24 NJW 19 NJW C26 C19 C 0 1 Y N N 31.203 14.507 17.381 0.938 -0.269 0.098 C26 NJW 20 NJW C27 C20 C 0 1 Y N N 30.942 15.892 17.446 1.711 -1.018 -0.768 C27 NJW 21 NJW C28 C21 C 0 1 Y N N 29.614 16.361 17.302 2.203 -2.247 -0.369 C28 NJW 22 NJW C29 C22 C 0 1 Y N N 28.552 15.432 17.087 1.921 -2.726 0.896 C29 NJW 23 NJW C30 C23 C 0 1 Y N N 28.831 14.033 17.019 1.148 -1.977 1.763 C30 NJW 24 NJW C31 C24 C 0 1 Y N N 30.162 13.558 17.165 0.661 -0.745 1.366 C31 NJW 25 NJW N01 N1 N 0 1 N N N 33.122 15.308 21.235 3.040 3.410 1.128 N01 NJW 26 NJW N11 N2 N 0 1 N N N 33.542 14.751 16.326 -1.009 1.195 0.042 N11 NJW 27 NJW N32 N3 N 1 1 N N N 27.042 15.887 16.903 2.447 -4.043 1.323 N32 NJW 28 NJW O16 O2 O 0 1 N N N 32.700 14.373 10.568 -5.086 -2.113 -1.716 O16 NJW 29 NJW O20 O3 O 0 1 N N N 32.293 16.932 10.487 -6.654 -0.732 -0.342 O20 NJW 30 NJW O21 O4 O 0 1 N N N 32.232 18.108 12.383 -6.026 1.000 0.897 O21 NJW 31 NJW O25 O5 O 0 1 N N N 35.195 15.810 19.347 0.380 3.849 1.823 O25 NJW 32 NJW O33 O6 O -1 1 N N N 26.183 15.168 16.505 2.198 -4.465 2.438 O33 NJW 33 NJW O34 O7 O 0 1 N N N 26.870 17.062 17.186 3.128 -4.703 0.559 O34 NJW 34 NJW H171 H1 H 0 0 N N N 33.328 12.334 12.229 -2.564 -2.327 -2.381 H171 NJW 35 NJW H181 H2 H 0 0 N N N 33.670 12.491 14.621 -0.757 -0.857 -1.602 H181 NJW 36 NJW H101 H4 H 0 0 N N N 32.757 12.973 17.537 0.510 1.184 -1.415 H101 NJW 37 NJW H041 H6 H 0 0 N N N 30.147 14.838 21.128 2.053 2.015 -2.315 H041 NJW 38 NJW H051 H7 H 0 0 N N N 28.200 13.305 21.387 3.493 0.774 -3.875 H051 NJW 39 NJW H061 H8 H 0 0 N N N 28.375 10.906 20.682 5.594 -0.232 -3.084 H061 NJW 40 NJW H071 H9 H 0 0 N N N 30.530 10.045 19.732 6.269 -0.005 -0.730 H071 NJW 41 NJW H081 H10 H 0 0 N N N 32.486 11.577 19.495 4.849 1.237 0.848 H081 NJW 42 NJW H131 H12 H 0 0 N N N 32.886 16.749 14.446 -3.554 1.403 0.709 H131 NJW 43 NJW H271 H13 H 0 0 N N N 31.750 16.590 17.605 1.931 -0.643 -1.757 H271 NJW 44 NJW H281 H14 H 0 0 N N N 29.405 17.419 17.355 2.807 -2.832 -1.047 H281 NJW 45 NJW H301 H15 H 0 0 N N N 28.026 13.332 16.856 0.928 -2.351 2.752 H301 NJW 46 NJW H311 H16 H 0 0 N N N 30.380 12.501 17.113 0.057 -0.160 2.043 H311 NJW 47 NJW H011 H17 H 0 0 N N N 32.794 14.950 22.109 3.990 3.599 1.085 H011 NJW 48 NJW H4 H19 H 0 1 N N N 34.114 15.425 21.274 2.476 3.898 1.747 H4 NJW 49 NJW H6 H20 H 0 1 N N N 32.009 18.811 11.784 -6.948 1.112 1.168 H6 NJW 50 NJW H1 H21 H 0 1 N N N 32.512 15.234 10.213 -5.510 -1.816 -2.533 H1 NJW 51 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NJW O20 C19 DOUB N N 1 NJW O16 C15 SING N N 2 NJW C19 O21 SING N N 3 NJW C19 C14 SING N N 4 NJW C15 C14 SING Y N 5 NJW C15 C17 DOUB Y N 6 NJW C14 C13 DOUB Y N 7 NJW C17 C18 SING Y N 8 NJW C13 C12 SING Y N 9 NJW C18 C12 DOUB Y N 10 NJW C12 N11 SING N N 11 NJW N11 C22 SING N N 12 NJW N11 C10 SING N N 13 NJW O33 N32 SING N N 14 NJW O23 C22 DOUB N N 15 NJW N32 C29 SING N N 16 NJW N32 O34 DOUB N N 17 NJW C30 C29 DOUB Y N 18 NJW C30 C31 SING Y N 19 NJW C22 C24 SING N N 20 NJW C29 C28 SING Y N 21 NJW C31 C26 DOUB Y N 22 NJW C28 C27 DOUB Y N 23 NJW C26 C27 SING Y N 24 NJW C26 C10 SING N N 25 NJW C10 C09 SING N N 26 NJW C24 C09 SING N N 27 NJW C24 O25 DOUB N N 28 NJW C09 C02 DOUB N Z 29 NJW C08 C07 DOUB Y N 30 NJW C08 C03 SING Y N 31 NJW C07 C06 SING Y N 32 NJW C02 C03 SING N N 33 NJW C02 N01 SING N N 34 NJW C03 C04 DOUB Y N 35 NJW C06 C05 DOUB Y N 36 NJW C04 C05 SING Y N 37 NJW C17 H171 SING N N 38 NJW C18 H181 SING N N 39 NJW C10 H101 SING N N 40 NJW C04 H041 SING N N 41 NJW C05 H051 SING N N 42 NJW C06 H061 SING N N 43 NJW C07 H071 SING N N 44 NJW C08 H081 SING N N 45 NJW C13 H131 SING N N 46 NJW C27 H271 SING N N 47 NJW C28 H281 SING N N 48 NJW C30 H301 SING N N 49 NJW C31 H311 SING N N 50 NJW N01 H011 SING N N 51 NJW N01 H4 SING N N 52 NJW O21 H6 SING N N 53 NJW O16 H1 SING N N 54 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NJW InChI InChI 1.03 "InChI=1S/C24H17N3O7/c25-20(13-4-2-1-3-5-13)19-21(14-6-8-15(9-7-14)27(33)34)26(23(30)22(19)29)16-10-11-18(28)17(12-16)24(31)32/h1-12,21,28H,25H2,(H,31,32)/b20-19-/t21-/m1/s1" NJW InChIKey InChI 1.03 LSUDXEOVUGYZBL-KEDKVEHMSA-N NJW SMILES_CANONICAL CACTVS 3.385 "NC(/c1ccccc1)=C2/[C@H](N(c3ccc(O)c(c3)C(O)=O)C(=O)C2=O)c4ccc(cc4)[N+]([O-])=O" NJW SMILES CACTVS 3.385 "NC(c1ccccc1)=C2[CH](N(c3ccc(O)c(c3)C(O)=O)C(=O)C2=O)c4ccc(cc4)[N+]([O-])=O" NJW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)/C(=C/2\[C@H](N(C(=O)C2=O)c3ccc(c(c3)C(=O)O)O)c4ccc(cc4)[N+](=O)[O-])/N" NJW SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)C(=C2C(N(C(=O)C2=O)c3ccc(c(c3)C(=O)O)O)c4ccc(cc4)[N+](=O)[O-])N" # _pdbx_chem_comp_identifier.comp_id NJW _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "5-[(2~{R},3~{Z})-3-[azanyl(phenyl)methylidene]-2-(4-nitrophenyl)-4,5-bis(oxidanylidene)pyrrolidin-1-yl]-2-oxidanyl-benzoic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NJW "Create component" 2019-12-02 PDBE NJW "Modify coordinates" 2019-12-10 PDBE NJW "Modify linking type" 2019-12-10 PDBE NJW "Initial release" 2020-04-29 RCSB ##