data_NKQ # _chem_comp.id NKQ _chem_comp.name "(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E,12Z,15Z)-octadeca-9,12,15-trienoate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H37 O7 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "18:3 LPA, 1-linolenoyl-lysophosphatidic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2010-11-05 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 432.488 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NKQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3NKQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NKQ OAA OAA O 0 1 N N N 24.331 36.688 15.182 11.093 1.905 -0.464 OAA NKQ 1 NKQ OAB OAB O 0 1 N N N 24.046 38.363 13.411 12.025 -0.552 -0.530 OAB NKQ 2 NKQ PAC PAC P 0 1 N N N 24.661 38.146 14.902 10.893 0.408 0.093 PAC NKQ 3 NKQ OAD OAD O 0 1 N N N 26.105 38.501 15.036 11.006 0.411 1.568 OAD NKQ 4 NKQ OAE OAE O 0 1 N N N 18.195 38.323 18.144 3.265 0.707 0.893 OAE NKQ 5 NKQ OAF OAF O 0 1 N N N 23.765 38.774 16.063 9.437 -0.133 -0.333 OAF NKQ 6 NKQ CAG CAG C 0 1 N N N 22.377 38.457 15.981 8.222 0.443 0.149 CAG NKQ 7 NKQ CAH CAH C 0 1 N N R 21.898 38.118 17.367 7.030 -0.307 -0.449 CAH NKQ 8 NKQ CAI CAI C 0 1 N N N 20.411 37.952 17.446 5.732 0.228 0.162 CAI NKQ 9 NKQ OAJ OAJ O 0 1 N N N 19.776 39.108 16.828 4.611 -0.562 -0.316 OAJ NKQ 10 NKQ CAK CAK C 0 1 N N N 18.472 39.014 17.165 3.392 -0.221 0.129 CAK NKQ 11 NKQ CAL CAL C 0 1 N N N 17.451 40.039 16.707 2.181 -0.995 -0.324 CAL NKQ 12 NKQ CAM CAM C 0 1 N N N 16.266 39.173 16.249 0.927 -0.405 0.326 CAM NKQ 13 NKQ CAN CAN C 0 1 N N N 15.101 39.972 15.626 -0.303 -1.191 -0.134 CAN NKQ 14 NKQ CAO CAO C 0 1 N N N 15.766 40.805 14.505 -1.557 -0.602 0.515 CAO NKQ 15 NKQ CAP CAP C 0 1 N N N 14.980 41.697 13.491 -2.786 -1.388 0.056 CAP NKQ 16 NKQ CAQ CAQ C 0 1 N N N 14.086 40.977 12.465 -4.040 -0.798 0.705 CAQ NKQ 17 NKQ CAR CAR C 0 1 N N N 13.281 41.823 11.437 -5.270 -1.584 0.245 CAR NKQ 18 NKQ CAS CAS C 0 1 N N N 12.810 40.794 10.609 -6.505 -1.003 0.885 CAS NKQ 19 NKQ CAT CAT C 0 1 N N N 12.058 39.895 11.319 -7.509 -0.615 0.138 CAT NKQ 20 NKQ CAU CAU C 0 1 N N N 11.424 38.760 10.887 -8.743 -0.035 0.777 CAU NKQ 21 NKQ CAV CAV C 0 1 N N N 11.839 37.952 11.954 -9.026 1.321 0.183 CAV NKQ 22 NKQ CAW CAW C 0 1 N N N 11.572 36.598 12.083 -10.214 1.589 -0.301 CAW NKQ 23 NKQ CAX CAX C 0 1 N N N 10.833 35.964 11.087 -11.343 0.609 -0.112 CAX NKQ 24 NKQ CAY CAY C 0 1 N N N 11.662 35.379 10.128 -12.520 1.313 0.512 CAY NKQ 25 NKQ CAZ CAZ C 0 1 N N N 11.461 35.630 8.761 -13.703 1.231 -0.043 CAZ NKQ 26 NKQ CBA CBA C 0 1 N N N 10.417 36.475 8.362 -13.926 0.299 -1.206 CBA NKQ 27 NKQ CBB CBB C 0 1 N N N 9.744 36.020 7.069 -15.107 -0.625 -0.901 CBB NKQ 28 NKQ OBC OBC O 0 1 N N N 22.213 36.717 17.399 7.005 -0.111 -1.864 OBC NKQ 29 NKQ HAG HAG H 0 1 N N N 21.817 39.319 15.589 8.190 0.368 1.236 HAG NKQ 30 NKQ HAGA HAGA H 0 0 N N N 22.226 37.598 15.310 8.175 1.492 -0.144 HAGA NKQ 31 NKQ HAH HAH H 0 1 N N N 22.286 38.852 18.088 7.123 -1.370 -0.230 HAH NKQ 32 NKQ HAI HAI H 0 1 N N N 20.111 37.036 16.915 5.788 0.160 1.248 HAI NKQ 33 NKQ HAIA HAIA H 0 0 N N N 20.102 37.878 18.499 5.595 1.268 -0.131 HAIA NKQ 34 NKQ HAL HAL H 0 1 N N N 17.165 40.719 17.523 2.093 -0.930 -1.408 HAL NKQ 35 NKQ HALA HALA H 0 0 N N N 17.840 40.660 15.887 2.286 -2.039 -0.029 HALA NKQ 36 NKQ HAM HAM H 0 1 N N N 16.636 38.467 15.491 1.015 -0.470 1.410 HAM NKQ 37 NKQ HAMA HAMA H 0 0 N N N 15.878 38.639 17.128 0.822 0.639 0.031 HAMA NKQ 38 NKQ HAN HAN H 0 1 N N N 14.330 39.301 15.220 -0.391 -1.127 -1.219 HAN NKQ 39 NKQ HANA HANA H 0 0 N N N 14.619 40.621 16.372 -0.198 -2.235 0.161 HANA NKQ 40 NKQ HAO HAO H 0 1 N N N 16.437 41.500 15.031 -1.469 -0.666 1.600 HAO NKQ 41 NKQ HAOA HAOA H 0 0 N N N 16.294 40.068 13.882 -1.662 0.442 0.221 HAOA NKQ 42 NKQ HAP HAP H 0 1 N N N 14.325 42.354 14.082 -2.874 -1.323 -1.029 HAP NKQ 43 NKQ HAPA HAPA H 0 0 N N N 15.727 42.269 12.921 -2.681 -2.432 0.350 HAPA NKQ 44 NKQ HAQ HAQ H 0 1 N N N 14.750 40.325 11.878 -3.952 -0.863 1.789 HAQ NKQ 45 NKQ HAQA HAQA H 0 0 N N N 13.345 40.407 13.045 -4.145 0.246 0.410 HAQA NKQ 46 NKQ HAR HAR H 0 1 N N N 12.471 42.405 11.901 -5.358 -1.520 -0.839 HAR NKQ 47 NKQ HARA HARA H 0 0 N N N 13.905 42.553 10.901 -5.165 -2.628 0.540 HARA NKQ 48 NKQ HAS HAS H 0 1 N N N 13.013 40.720 9.551 -6.562 -0.907 1.959 HAS NKQ 49 NKQ HAT HAT H 0 1 N N N 11.949 40.113 12.371 -7.451 -0.712 -0.937 HAT NKQ 50 NKQ HAU HAU H 0 1 N N N 10.333 38.859 10.791 -9.591 -0.695 0.595 HAU NKQ 51 NKQ HAV HAV H 0 1 N N N 12.413 38.422 12.739 -8.250 2.072 0.157 HAV NKQ 52 NKQ HAW HAW H 0 1 N N N 11.930 36.045 12.939 -10.383 2.513 -0.834 HAW NKQ 53 NKQ HAX HAX H 0 1 N N N 10.216 35.179 11.549 -11.636 0.202 -1.080 HAX NKQ 54 NKQ HAXA HAXA H 0 0 N N N 10.191 36.709 10.594 -11.016 -0.201 0.539 HAXA NKQ 55 NKQ HAY HAY H 0 1 N N N 12.465 34.728 10.440 -12.388 1.886 1.419 HAY NKQ 56 NKQ HAZ HAZ H 0 1 N N N 12.106 35.175 8.023 -14.519 1.831 0.332 HAZ NKQ 57 NKQ HBA HBA H 0 1 N N N 9.660 36.490 9.160 -14.143 0.881 -2.102 HBA NKQ 58 NKQ HBAA HBAA H 0 0 N N N 10.829 37.482 8.202 -13.030 -0.299 -1.370 HBAA NKQ 59 NKQ HBB HBB H 0 1 N N N 8.937 36.720 6.809 -14.890 -1.207 -0.005 HBB NKQ 60 NKQ HBBA HBBA H 0 0 N N N 10.486 35.999 6.257 -16.003 -0.027 -0.738 HBBA NKQ 61 NKQ HBBB HBBB H 0 0 N N N 9.324 35.013 7.209 -15.268 -1.299 -1.742 HBBB NKQ 62 NKQ HOBC HOBC H 0 0 N N N 21.959 36.354 18.239 6.924 0.814 -2.132 HOBC NKQ 63 NKQ HOAA HOAA H 0 0 N N N 25.127 36.220 15.406 11.031 1.979 -1.426 HOAA NKQ 64 NKQ HOAB HOAB H 0 0 N N N 24.724 38.694 12.833 12.929 -0.285 -0.314 HOAB NKQ 65 NKQ HAUA HAUA H 0 0 N N N 11.751 38.407 9.898 -8.584 0.065 1.851 HAUA NKQ 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NKQ OAA PAC SING N N 1 NKQ OAB PAC SING N N 2 NKQ PAC OAD DOUB N N 3 NKQ PAC OAF SING N N 4 NKQ OAE CAK DOUB N N 5 NKQ OAF CAG SING N N 6 NKQ CAG CAH SING N N 7 NKQ CAH CAI SING N N 8 NKQ CAH OBC SING N N 9 NKQ CAI OAJ SING N N 10 NKQ OAJ CAK SING N N 11 NKQ CAK CAL SING N N 12 NKQ CAL CAM SING N N 13 NKQ CAM CAN SING N N 14 NKQ CAN CAO SING N N 15 NKQ CAO CAP SING N N 16 NKQ CAP CAQ SING N N 17 NKQ CAQ CAR SING N N 18 NKQ CAR CAS SING N N 19 NKQ CAS CAT DOUB N N 20 NKQ CAT CAU SING N N 21 NKQ CAU CAV SING N N 22 NKQ CAV CAW DOUB N N 23 NKQ CAW CAX SING N N 24 NKQ CAX CAY SING N N 25 NKQ CAY CAZ DOUB N N 26 NKQ CAZ CBA SING N N 27 NKQ CBA CBB SING N N 28 NKQ CAG HAG SING N N 29 NKQ CAG HAGA SING N N 30 NKQ CAH HAH SING N N 31 NKQ CAI HAI SING N N 32 NKQ CAI HAIA SING N N 33 NKQ CAL HAL SING N N 34 NKQ CAL HALA SING N N 35 NKQ CAM HAM SING N N 36 NKQ CAM HAMA SING N N 37 NKQ CAN HAN SING N N 38 NKQ CAN HANA SING N N 39 NKQ CAO HAO SING N N 40 NKQ CAO HAOA SING N E 41 NKQ CAP HAP SING N N 42 NKQ CAP HAPA SING N N 43 NKQ CAQ HAQ SING N N 44 NKQ CAQ HAQA SING N N 45 NKQ CAR HAR SING N N 46 NKQ CAR HARA SING N N 47 NKQ CAS HAS SING N Z 48 NKQ CAT HAT SING N N 49 NKQ CAU HAU SING N N 50 NKQ CAV HAV SING N N 51 NKQ CAW HAW SING N N 52 NKQ CAX HAX SING N N 53 NKQ CAX HAXA SING N N 54 NKQ CAY HAY SING N Z 55 NKQ CAZ HAZ SING N N 56 NKQ CBA HBA SING N N 57 NKQ CBA HBAA SING N N 58 NKQ CBB HBB SING N N 59 NKQ CBB HBBA SING N N 60 NKQ CBB HBBB SING N N 61 NKQ OBC HOBC SING N N 62 NKQ CAU HAUA SING N N 63 NKQ OAA HOAA SING N N 64 NKQ OAB HOAB SING N N 65 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NKQ SMILES ACDLabs 12.01 "O=P(OCC(O)COC(=O)CCCCCCC/C=C/C\C=C/C\C=C/CC)(O)O" NKQ SMILES_CANONICAL CACTVS 3.370 "CC/C=C\C\C=C/C/C=C/CCCCCCCC(=O)OC[C@@H](O)CO[P](O)(O)=O" NKQ SMILES CACTVS 3.370 "CCC=CCC=CCC=CCCCCCCCC(=O)OC[CH](O)CO[P](O)(O)=O" NKQ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "CC/C=C\C/C=C\C/C=C/CCCCCCCC(=O)OC[C@H](COP(=O)(O)O)O" NKQ SMILES "OpenEye OEToolkits" 1.7.0 "CCC=CCC=CCC=CCCCCCCCC(=O)OCC(COP(=O)(O)O)O" NKQ InChI InChI 1.03 "InChI=1S/C21H37O7P/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-21(23)27-18-20(22)19-28-29(24,25)26/h3-4,6-7,9-10,20,22H,2,5,8,11-19H2,1H3,(H2,24,25,26)/b4-3-,7-6-,10-9+/t20-/m1/s1" NKQ InChIKey InChI 1.03 DVNZKWQUAXJYGB-ZGDPLQDRSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NKQ "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-2-hydroxy-3-(phosphonooxy)propyl (9E,12Z,15Z)-octadeca-9,12,15-trienoate" NKQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[(2R)-2-hydroxy-3-phosphonooxy-propyl] (9E,12Z,15Z)-octadeca-9,12,15-trienoate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NKQ "Create component" 2010-11-05 PDBJ NKQ "Modify descriptor" 2011-06-04 RCSB NKQ "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id NKQ _pdbx_chem_comp_synonyms.name "18:3 LPA, 1-linolenoyl-lysophosphatidic acid" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##