data_NKV # _chem_comp.id NKV _chem_comp.name "N-(2-methylpropanoyl)adenosine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H19 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-05-17 _chem_comp.pdbx_modified_date 2020-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 337.331 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NKV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6O7F _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NKV C13 C1 C 0 1 N N S 44.869 42.136 117.955 4.417 0.503 0.984 C13 NKV 1 NKV C20 C2 C 0 1 N N N 51.059 49.045 116.709 -4.806 -0.163 -0.109 C20 NKV 2 NKV C22 C3 C 0 1 N N N 51.610 50.321 117.302 -6.001 -1.030 0.191 C22 NKV 3 NKV C24 C4 C 0 1 N N N 52.693 50.839 116.361 -5.938 -1.502 1.645 C24 NKV 4 NKV C02 C5 C 0 1 Y N N 49.141 47.365 116.476 -2.459 0.134 -0.259 C02 NKV 5 NKV C04 C6 C 0 1 Y N N 48.923 45.942 114.662 -1.572 2.163 -0.907 C04 NKV 6 NKV C06 C7 C 0 1 Y N N 47.750 45.411 116.580 -0.079 0.484 -0.427 C06 NKV 7 NKV C07 C8 C 0 1 Y N N 48.274 46.564 117.203 -1.156 -0.373 -0.134 C07 NKV 8 NKV C09 C9 C 0 1 Y N N 46.914 45.406 118.539 0.671 -1.500 0.173 C09 NKV 9 NKV C11 C10 C 0 1 N N R 46.359 43.724 117.122 2.437 0.208 -0.403 C11 NKV 10 NKV C12 C11 C 0 1 N N R 46.062 42.896 118.295 2.934 0.921 0.874 C12 NKV 11 NKV C14 C12 C 0 1 N N R 44.172 42.878 116.887 4.641 -0.413 -0.239 C14 NKV 12 NKV C16 C13 C 0 1 N N N 42.850 43.384 117.388 5.578 -1.567 0.124 C16 NKV 13 NKV C23 C14 C 0 1 N N N 50.470 51.376 117.369 -7.283 -0.224 -0.029 C23 NKV 14 NKV N01 N1 N 0 1 N N N 49.710 48.587 117.052 -3.561 -0.665 0.017 N01 NKV 15 NKV N03 N2 N 0 1 Y N N 49.433 47.029 115.213 -2.614 1.396 -0.643 N03 NKV 16 NKV N05 N3 N 0 1 Y N N 48.093 45.144 115.338 -0.333 1.731 -0.808 N05 NKV 17 NKV N08 N4 N 0 1 Y N N 47.689 46.527 118.516 -0.628 -1.567 0.225 N08 NKV 18 NKV N10 N5 N 0 1 Y N N 47.043 44.912 117.445 1.058 -0.255 -0.224 N10 NKV 19 NKV O15 O1 O 0 1 N N N 45.018 44.050 116.496 3.328 -0.916 -0.568 O15 NKV 20 NKV O17 O2 O 0 1 N N N 41.965 42.284 117.573 5.864 -2.334 -1.047 O17 NKV 21 NKV O18 O3 O 0 1 N N N 45.238 40.833 117.479 5.267 1.650 0.916 O18 NKV 22 NKV O19 O4 O 0 1 N N N 47.173 41.987 118.558 2.822 2.339 0.732 O19 NKV 23 NKV O21 O5 O 0 1 N N N 51.733 48.430 115.968 -4.963 0.986 -0.463 O21 NKV 24 NKV H1 H1 H 0 1 N N N 44.214 42.049 118.835 4.592 -0.046 1.910 H1 NKV 25 NKV H2 H2 H 0 1 N N N 52.022 50.141 118.306 -5.998 -1.895 -0.472 H2 NKV 26 NKV H3 H3 H 0 1 N N N 53.116 51.770 116.765 -6.803 -2.129 1.861 H3 NKV 27 NKV H4 H4 H 0 1 N N N 53.489 50.085 116.268 -5.025 -2.076 1.801 H4 NKV 28 NKV H5 H5 H 0 1 N N N 52.255 51.035 115.371 -5.941 -0.637 2.308 H5 NKV 29 NKV H6 H6 H 0 1 N N N 49.183 45.694 113.644 -1.744 3.184 -1.216 H6 NKV 30 NKV H7 H7 H 0 1 N N N 46.314 45.039 119.359 1.343 -2.312 0.410 H7 NKV 31 NKV H8 H8 H 0 1 N N N 46.947 43.135 116.403 2.503 0.877 -1.261 H8 NKV 32 NKV H9 H9 H 0 1 N N N 45.874 43.533 119.172 2.375 0.579 1.745 H9 NKV 33 NKV H10 H10 H 0 1 N N N 44.014 42.226 116.015 5.049 0.159 -1.072 H10 NKV 34 NKV H11 H11 H 0 1 N N N 42.995 43.904 118.346 6.506 -1.166 0.531 H11 NKV 35 NKV H12 H12 H 0 1 N N N 42.421 44.081 116.653 5.100 -2.204 0.868 H12 NKV 36 NKV H13 H13 H 0 1 N N N 49.678 51.019 118.044 -7.328 0.112 -1.065 H13 NKV 37 NKV H14 H14 H 0 1 N N N 50.873 52.327 117.747 -8.148 -0.851 0.188 H14 NKV 38 NKV H15 H15 H 0 1 N N N 50.052 51.529 116.363 -7.286 0.641 0.634 H15 NKV 39 NKV H16 H16 H 0 1 N N N 49.163 49.122 117.696 -3.435 -1.584 0.300 H16 NKV 40 NKV H17 H17 H 0 1 N N N 41.127 42.601 117.890 6.454 -3.084 -0.892 H17 NKV 41 NKV H18 H18 H 0 1 N N N 45.686 40.358 118.169 6.210 1.445 0.981 H18 NKV 42 NKV H19 H19 H 0 1 N N N 46.974 41.454 119.319 3.176 2.838 1.481 H19 NKV 43 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NKV C04 N03 DOUB Y N 1 NKV C04 N05 SING Y N 2 NKV N03 C02 SING Y N 3 NKV N05 C06 DOUB Y N 4 NKV O21 C20 DOUB N N 5 NKV C24 C22 SING N N 6 NKV C02 N01 SING N N 7 NKV C02 C07 DOUB Y N 8 NKV O15 C14 SING N N 9 NKV O15 C11 SING N N 10 NKV C06 C07 SING Y N 11 NKV C06 N10 SING Y N 12 NKV C20 N01 SING N N 13 NKV C20 C22 SING N N 14 NKV C14 C16 SING N N 15 NKV C14 C13 SING N N 16 NKV C11 N10 SING N N 17 NKV C11 C12 SING N N 18 NKV C07 N08 SING Y N 19 NKV C22 C23 SING N N 20 NKV C16 O17 SING N N 21 NKV N10 C09 SING Y N 22 NKV O18 C13 SING N N 23 NKV C13 C12 SING N N 24 NKV C12 O19 SING N N 25 NKV N08 C09 DOUB Y N 26 NKV C13 H1 SING N N 27 NKV C22 H2 SING N N 28 NKV C24 H3 SING N N 29 NKV C24 H4 SING N N 30 NKV C24 H5 SING N N 31 NKV C04 H6 SING N N 32 NKV C09 H7 SING N N 33 NKV C11 H8 SING N N 34 NKV C12 H9 SING N N 35 NKV C14 H10 SING N N 36 NKV C16 H11 SING N N 37 NKV C16 H12 SING N N 38 NKV C23 H13 SING N N 39 NKV C23 H14 SING N N 40 NKV C23 H15 SING N N 41 NKV N01 H16 SING N N 42 NKV O17 H17 SING N N 43 NKV O18 H18 SING N N 44 NKV O19 H19 SING N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NKV SMILES ACDLabs 12.01 "C3(C(C(n2c1c(c(NC(C(C)C)=O)ncn1)nc2)OC3CO)O)O" NKV InChI InChI 1.03 "InChI=1S/C14H19N5O5/c1-6(2)13(23)18-11-8-12(16-4-15-11)19(5-17-8)14-10(22)9(21)7(3-20)24-14/h4-7,9-10,14,20-22H,3H2,1-2H3,(H,15,16,18,23)/t7-,9-,10-,14-/m1/s1" NKV InChIKey InChI 1.03 RSLAEWMJDPSZPS-AKAIJSEGSA-N NKV SMILES_CANONICAL CACTVS 3.385 "CC(C)C(=O)Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O" NKV SMILES CACTVS 3.385 "CC(C)C(=O)Nc1ncnc2n(cnc12)[CH]3O[CH](CO)[CH](O)[CH]3O" NKV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C(=O)Nc1c2c(ncn1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O" NKV SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(=O)Nc1c2c(ncn1)n(cn2)C3C(C(C(O3)CO)O)O" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NKV "SYSTEMATIC NAME" ACDLabs 12.01 "N-(2-methylpropanoyl)adenosine" NKV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[9-[(2~{R},3~{R},4~{S},5~{R})-5-(hydroxymethyl)-3,4-bis(oxidanyl)oxolan-2-yl]purin-6-yl]-2-methyl-propanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NKV "Create component" 2019-05-17 RCSB NKV "Initial release" 2020-09-09 RCSB ##