data_NMN # _chem_comp.id NMN _chem_comp.name "BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H16 N2 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "NICOTINAMIDE MONONUCLEOTIDE" _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2001-01-24 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 335.227 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NMN _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1HYB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NMN O3P O3P O 0 1 N N N 29.849 22.052 43.664 -4.348 -1.543 -1.192 O3P NMN 1 NMN P P P 0 1 N N N 28.564 21.903 42.909 -4.573 -1.021 0.175 P NMN 2 NMN O1P O1P O 0 1 N N N 28.140 20.503 43.107 -5.121 -2.205 1.118 O1P NMN 3 NMN O2P O2P O 0 1 N N N 27.606 22.943 43.376 -5.656 0.169 0.124 O2P NMN 4 NMN O5R O5R O 0 1 N N N 29.183 22.081 41.490 -3.187 -0.460 0.770 O5R NMN 5 NMN C5R C5R C 0 1 N N N 28.864 23.194 40.668 -2.694 0.500 -0.167 C5R NMN 6 NMN C4R C4R C 0 1 N N R 29.696 22.965 39.425 -1.370 1.075 0.340 C4R NMN 7 NMN O4R O4R O 0 1 N N N 29.748 24.242 38.714 -0.349 0.054 0.353 O4R NMN 8 NMN C3R C3R C 0 1 N N S 31.171 22.582 39.669 -0.840 2.151 -0.633 C3R NMN 9 NMN O3R O3R O 0 1 N N N 31.591 21.554 38.750 -1.175 3.459 -0.166 O3R NMN 10 NMN C2R C2R C 0 1 N N R 31.890 23.892 39.406 0.694 1.946 -0.621 C2R NMN 11 NMN O2R O2R O 0 1 N N N 33.257 23.650 39.038 1.352 3.123 -0.148 O2R NMN 12 NMN C1R C1R C 0 1 N N R 31.066 24.434 38.277 0.905 0.769 0.357 C1R NMN 13 NMN N1 N1 N 1 1 Y N N 31.356 25.836 38.033 1.988 -0.098 -0.116 N1 NMN 14 NMN C2 C2 C 0 1 Y N N 32.323 26.178 37.090 3.175 -0.001 0.445 C2 NMN 15 NMN C3 C3 C 0 1 Y N N 32.803 27.565 36.948 4.231 -0.806 0.016 C3 NMN 16 NMN C7 C7 C 0 1 N N N 33.930 27.772 36.017 5.566 -0.693 0.641 C7 NMN 17 NMN O7 O7 O 0 1 N N N 34.377 28.939 35.909 5.752 0.110 1.534 O7 NMN 18 NMN N7 N7 N 0 1 N N N 34.467 26.773 35.300 6.575 -1.480 0.221 N7 NMN 19 NMN C4 C4 C 0 1 Y N N 32.036 28.670 37.634 4.002 -1.728 -1.014 C4 NMN 20 NMN C5 C5 C 0 1 Y N N 30.962 28.146 38.541 2.735 -1.794 -1.565 C5 NMN 21 NMN C6 C6 C 0 1 Y N N 30.674 26.871 38.738 1.744 -0.957 -1.087 C6 NMN 22 NMN H1PO OH1P H 0 0 N N N 27.325 20.408 42.628 -5.951 -2.513 0.727 H1PO NMN 23 NMN H2PO OH2P H 0 0 N N N 26.791 22.848 42.897 -5.773 0.480 1.032 H2PO NMN 24 NMN H5R1 1H5R H 0 0 N N N 27.774 23.329 40.475 -3.420 1.304 -0.280 H5R1 NMN 25 NMN H5R2 2H5R H 0 0 N N N 29.020 24.186 41.152 -2.534 0.017 -1.131 H5R2 NMN 26 NMN H4RC CH4R H 0 0 N N N 29.213 22.116 38.885 -1.498 1.497 1.338 H4RC NMN 27 NMN H3RC CH3R H 0 0 N N N 31.370 22.164 40.683 -1.239 1.990 -1.635 H3RC NMN 28 NMN H3RO OH3R H 0 0 N N N 32.498 21.318 38.900 -0.820 4.086 -0.811 H3RO NMN 29 NMN H2RC CH2R H 0 0 N N N 31.964 24.587 40.274 1.052 1.684 -1.616 H2RC NMN 30 NMN H2RO OH2R H 0 0 N N N 33.707 24.470 38.873 1.133 3.834 -0.766 H2RO NMN 31 NMN H1RC CH1R H 0 0 N N N 31.272 23.928 37.305 1.127 1.142 1.357 H1RC NMN 32 NMN HC2 HC2 H 0 1 N N N 32.705 25.356 36.460 3.337 0.715 1.238 HC2 NMN 33 NMN HN71 1HN7 H 0 0 N N N 34.103 25.824 35.387 7.451 -1.406 0.631 HN71 NMN 34 NMN HN72 2HN7 H 0 0 N N N 35.245 26.916 34.656 6.425 -2.124 -0.489 HN72 NMN 35 NMN HC4 HC4 H 0 1 N N N 32.238 29.744 37.488 4.795 -2.370 -1.368 HC4 NMN 36 NMN HC5 HC5 H 0 1 N N N 30.294 28.784 39.144 2.523 -2.493 -2.361 HC5 NMN 37 NMN HC6 HC6 H 0 1 N N N 29.879 26.674 39.477 0.754 -1.007 -1.515 HC6 NMN 38 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NMN O3P P DOUB N N 1 NMN P O1P SING N N 2 NMN P O2P SING N N 3 NMN P O5R SING N N 4 NMN O1P H1PO SING N N 5 NMN O2P H2PO SING N N 6 NMN O5R C5R SING N N 7 NMN C5R C4R SING N N 8 NMN C5R H5R1 SING N N 9 NMN C5R H5R2 SING N N 10 NMN C4R O4R SING N N 11 NMN C4R C3R SING N N 12 NMN C4R H4RC SING N N 13 NMN O4R C1R SING N N 14 NMN C3R O3R SING N N 15 NMN C3R C2R SING N N 16 NMN C3R H3RC SING N N 17 NMN O3R H3RO SING N N 18 NMN C2R O2R SING N N 19 NMN C2R C1R SING N N 20 NMN C2R H2RC SING N N 21 NMN O2R H2RO SING N N 22 NMN C1R N1 SING N N 23 NMN C1R H1RC SING N N 24 NMN N1 C2 DOUB Y N 25 NMN N1 C6 SING Y N 26 NMN C2 C3 SING Y N 27 NMN C2 HC2 SING N N 28 NMN C3 C7 SING N N 29 NMN C3 C4 DOUB Y N 30 NMN C7 O7 DOUB N N 31 NMN C7 N7 SING N N 32 NMN N7 HN71 SING N N 33 NMN N7 HN72 SING N N 34 NMN C4 C5 SING Y N 35 NMN C4 HC4 SING N N 36 NMN C5 C6 DOUB Y N 37 NMN C5 HC5 SING N N 38 NMN C6 HC6 SING N N 39 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NMN SMILES ACDLabs 10.04 "O=C(c1ccc[n+](c1)C2OC(C(O)C2O)COP(=O)(O)O)N" NMN SMILES_CANONICAL CACTVS 3.341 "NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]2O" NMN SMILES CACTVS 3.341 "NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O" NMN SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)COP(=O)(O)O)O)O)C(=O)N" NMN SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)(O)O)O)O)C(=O)N" NMN InChI InChI 1.03 "InChI=1S/C11H15N2O8P/c12-10(16)6-2-1-3-13(4-6)11-9(15)8(14)7(21-11)5-20-22(17,18)19/h1-4,7-9,11,14-15H,5H2,(H3-,12,16,17,18,19)/p+1/t7-,8-,9-,11-/m1/s1" NMN InChIKey InChI 1.03 DAYLJWODMCOQEW-TURQNECASA-O # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NMN "SYSTEMATIC NAME" ACDLabs 10.04 "3-carbamoyl-1-(5-O-phosphono-beta-D-ribofuranosyl)pyridinium" NMN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(3-aminocarbonylpyridin-1-ium-1-yl)-3,4-dihydroxy-oxolan-2-yl]methyl dihydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NMN "Create component" 2001-01-24 RCSB NMN "Modify descriptor" 2011-06-04 RCSB NMN "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id NMN _pdbx_chem_comp_synonyms.name "NICOTINAMIDE MONONUCLEOTIDE" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##