data_NO6 # _chem_comp.id NO6 _chem_comp.name "S-[(pyridin-2-yl)methyl]-L-cysteine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H12 N2 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-06 _chem_comp.pdbx_modified_date 2023-08-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 212.269 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NO6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7ULV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NO6 C11 C1 C 0 1 N N R 6.086 -21.752 -0.167 -2.800 0.112 -0.580 C11 NO6 1 NO6 N2 N1 N 0 1 Y N N 4.999 -25.999 4.021 3.092 0.919 0.705 N2 NO6 2 NO6 C3 C2 C 0 1 Y N N 4.702 -24.684 3.913 2.501 -0.235 0.463 C3 NO6 3 NO6 C5 C3 C 0 1 Y N N 2.774 -25.001 5.305 4.459 -1.018 -0.656 C5 NO6 4 NO6 C6 C4 C 0 1 Y N N 3.106 -26.346 5.402 5.048 0.207 -0.383 C6 NO6 5 NO6 C8 C5 C 0 1 N N N 5.588 -23.783 3.085 1.089 -0.462 0.940 C8 NO6 6 NO6 C10 C6 C 0 1 N N N 5.172 -21.785 1.055 -1.692 -0.283 0.398 C10 NO6 7 NO6 C1 C7 C 0 1 Y N N 4.232 -26.824 4.743 4.326 1.163 0.307 C1 NO6 8 NO6 C12 C8 C 0 1 N N N 7.371 -22.471 0.118 -4.143 -0.175 0.041 C12 NO6 9 NO6 C4 C9 C 0 1 Y N N 3.582 -24.159 4.553 3.161 -1.237 -0.222 C4 NO6 10 NO6 N15 N2 N 0 1 N N N 5.404 -22.377 -1.318 -2.698 1.546 -0.883 N15 NO6 11 NO6 O13 O1 O 0 1 N N N 8.313 -21.820 0.616 -4.631 -1.426 0.036 O13 NO6 12 NO6 O14 O2 O 0 1 N N N 7.452 -23.688 -0.150 -4.781 0.720 0.542 O14 NO6 13 NO6 S9 S1 S 0 1 N N N 4.791 -23.433 1.551 -0.075 0.063 -0.348 S9 NO6 14 NO6 H1 H1 H 0 1 N N N 6.311 -20.702 -0.407 -2.695 -0.463 -1.500 H1 NO6 15 NO6 H2 H2 H 0 1 N N N 1.899 -24.615 5.808 4.999 -1.783 -1.194 H2 NO6 16 NO6 H3 H3 H 0 1 N N N 2.493 -27.016 5.986 6.058 0.413 -0.705 H3 NO6 17 NO6 H4 H4 H 0 1 N N N 6.548 -24.286 2.894 0.944 -1.521 1.151 H4 NO6 18 NO6 H5 H5 H 0 1 N N N 5.768 -22.844 3.629 0.914 0.117 1.846 H5 NO6 19 NO6 H6 H6 H 0 1 N N N 5.674 -21.271 1.888 -1.798 0.292 1.319 H6 NO6 20 NO6 H7 H7 H 0 1 N N N 4.235 -21.262 0.812 -1.768 -1.347 0.624 H7 NO6 21 NO6 H8 H8 H 0 1 N N N 4.490 -27.870 4.814 4.777 2.119 0.524 H8 NO6 22 NO6 H9 H9 H 0 1 N N N 3.345 -23.109 4.465 2.671 -2.180 -0.417 H9 NO6 23 NO6 H10 H10 H 0 1 N N N 4.549 -21.893 -1.502 -2.793 2.100 -0.045 H10 NO6 24 NO6 H11 H11 H 0 1 N N N 5.995 -22.327 -2.123 -1.832 1.753 -1.358 H11 NO6 25 NO6 H13 H13 H 0 1 N N N 9.060 -22.392 0.745 -5.497 -1.561 0.446 H13 NO6 26 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NO6 N15 C11 SING N N 1 NO6 C11 C12 SING N N 2 NO6 C11 C10 SING N N 3 NO6 O14 C12 DOUB N N 4 NO6 C12 O13 SING N N 5 NO6 C10 S9 SING N N 6 NO6 S9 C8 SING N N 7 NO6 C8 C3 SING N N 8 NO6 C3 N2 DOUB Y N 9 NO6 C3 C4 SING Y N 10 NO6 N2 C1 SING Y N 11 NO6 C4 C5 DOUB Y N 12 NO6 C1 C6 DOUB Y N 13 NO6 C5 C6 SING Y N 14 NO6 C11 H1 SING N N 15 NO6 C5 H2 SING N N 16 NO6 C6 H3 SING N N 17 NO6 C8 H4 SING N N 18 NO6 C8 H5 SING N N 19 NO6 C10 H6 SING N N 20 NO6 C10 H7 SING N N 21 NO6 C1 H8 SING N N 22 NO6 C4 H9 SING N N 23 NO6 N15 H10 SING N N 24 NO6 N15 H11 SING N N 25 NO6 O13 H13 SING N N 26 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NO6 SMILES ACDLabs 12.01 "O=C(O)C(N)CSCc1ccccn1" NO6 InChI InChI 1.03 "InChI=1S/C9H12N2O2S/c10-8(9(12)13)6-14-5-7-3-1-2-4-11-7/h1-4,8H,5-6,10H2,(H,12,13)/t8-/m0/s1" NO6 InChIKey InChI 1.03 LHCQVBLTAYDREK-QMMMGPOBSA-N NO6 SMILES_CANONICAL CACTVS 3.385 "N[C@@H](CSCc1ccccn1)C(O)=O" NO6 SMILES CACTVS 3.385 "N[CH](CSCc1ccccn1)C(O)=O" NO6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)CSC[C@@H](C(=O)O)N" NO6 SMILES "OpenEye OEToolkits" 2.0.7 "c1ccnc(c1)CSCC(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NO6 "SYSTEMATIC NAME" ACDLabs 12.01 "S-[(pyridin-2-yl)methyl]-L-cysteine" NO6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-2-azanyl-3-(pyridin-2-ylmethylsulfanyl)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NO6 "Create component" 2022-04-06 RCSB NO6 "Initial release" 2023-08-30 RCSB #