data_NSU # _chem_comp.id NSU _chem_comp.name "N-[(3R,4R)-4-aminooxolan-3-yl]-N-[(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetyl]glycine" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H18 N4 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-07 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 326.305 _chem_comp.one_letter_code ? _chem_comp.three_letter_code ? _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7UID _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NSU C10 C10 C 0 1 N N N N N N 35.642 13.542 19.419 2.500 -1.996 1.252 C10 NSU 1 NSU C C02 C 0 1 N N N Y N Y 33.512 16.348 17.516 2.513 2.518 -0.037 C02 NSU 2 NSU C03 C03 C 0 1 N N N Y N N 34.669 16.400 18.511 2.228 1.614 1.134 C03 NSU 3 NSU C05 C05 C 0 1 N N R Y N N 35.455 14.789 20.237 2.802 -0.745 0.397 C05 NSU 4 NSU CA C06 C 0 1 N N R Y N N 36.918 15.345 20.344 2.703 -1.252 -1.059 C06 NSU 5 NSU C08 C08 C 0 1 N N N N N N 37.707 14.004 20.435 2.353 -2.750 -0.912 C08 NSU 6 NSU O09 O09 O 0 1 N N N N N N 36.898 13.014 19.831 2.834 -3.114 0.401 O09 NSU 7 NSU C11 C11 C 0 1 N N N N N N 33.400 16.191 20.732 0.499 0.051 0.425 C11 NSU 8 NSU C12 C12 C 0 1 N N N N N N 33.286 15.567 22.130 -0.526 1.125 0.680 C12 NSU 9 NSU C14 C14 C 0 1 N N N N N N 30.919 15.325 22.719 -2.584 0.004 1.326 C14 NSU 10 NSU C16 C16 C 0 1 N N N N N N 29.843 16.854 24.344 -4.342 -0.359 -0.170 C16 NSU 11 NSU C17 C17 C 0 1 N N N N N N 31.100 17.575 24.422 -3.592 0.277 -1.188 C17 NSU 12 NSU C18 C18 C 0 1 N N N N N N 32.163 17.151 23.732 -2.362 0.752 -0.899 C18 NSU 13 NSU C19 C19 C 0 1 N N N N N N 31.115 18.713 25.375 -4.160 0.423 -2.577 C19 NSU 14 NSU N04 N04 N 0 1 N N N Y N N 34.411 15.812 19.824 1.805 0.300 0.646 N04 NSU 15 NSU N N07 N 0 1 N N N Y Y N 37.020 16.210 21.528 3.990 -1.090 -1.749 N07 NSU 16 NSU N13 N13 N 0 1 N N N N N N 32.100 16.046 22.886 -1.861 0.610 0.367 N13 NSU 17 NSU N15 N15 N 0 1 N N N N N N 29.808 15.730 23.486 -3.813 -0.478 1.065 N15 NSU 18 NSU O O01 O 0 1 N N N Y N Y 33.708 16.849 16.431 2.378 2.106 -1.165 O01 NSU 19 NSU O20 O20 O 0 1 N N N N N N 28.842 17.124 24.954 -5.454 -0.796 -0.407 O20 NSU 20 NSU O21 O21 O 0 1 N N N N N N 30.895 14.368 21.950 -2.118 -0.115 2.442 O21 NSU 21 NSU O22 O22 O 0 1 N N N N N N 32.547 16.993 20.419 0.149 -1.038 0.020 O22 NSU 22 NSU H102 H102 H 0 0 N N N N N N 35.657 13.783 18.346 3.122 -2.002 2.148 H102 NSU 23 NSU H101 H101 H 0 0 N N N N N N 34.835 12.822 19.622 1.445 -2.026 1.521 H101 NSU 24 NSU HXT H1 H 0 1 N Y N Y N Y 32.868 14.759 16.655 3.089 4.322 -0.611 H1 NSU 25 NSU H031 H031 H 0 0 N N N Y N N 35.521 15.866 18.065 3.130 1.505 1.737 H031 NSU 26 NSU H032 H032 H 0 0 N N N Y N N 34.936 17.456 18.662 1.435 2.048 1.743 H032 NSU 27 NSU H051 H051 H 0 0 N N N Y N N 35.184 14.461 21.251 3.806 -0.373 0.605 H051 NSU 28 NSU HA H061 H 0 0 N N N Y N N 37.187 15.885 19.424 1.913 -0.726 -1.594 H061 NSU 29 NSU H082 H082 H 0 0 N N N N N N 37.898 13.747 21.487 1.275 -2.895 -0.974 H082 NSU 30 NSU H081 H081 H 0 0 N N N N N N 38.664 14.090 19.899 2.860 -3.335 -1.679 H081 NSU 31 NSU H121 H121 H 0 0 N N N N N N 33.214 14.475 22.021 -0.488 1.422 1.729 H121 NSU 32 NSU H122 H122 H 0 0 N N N N N N 34.191 15.820 22.701 -0.312 1.989 0.051 H122 NSU 33 NSU H181 H181 H 0 0 N N N N N N 33.099 17.681 23.833 -1.775 1.240 -1.663 H181 NSU 34 NSU H192 H192 H 0 0 N N N N N N 30.110 18.847 25.803 -5.156 -0.020 -2.610 H192 NSU 35 NSU H193 H193 H 0 0 N N N N N N 31.832 18.505 26.183 -4.223 1.480 -2.834 H193 NSU 36 NSU H191 H191 H 0 0 N N N N N N 31.414 19.630 24.846 -3.512 -0.087 -3.290 H191 NSU 37 NSU H H071 H 0 0 N N N Y Y N 37.951 16.567 21.601 3.933 -1.419 -2.701 H071 NSU 38 NSU H2 H2 H 0 1 N Y N Y Y N 36.377 16.971 21.441 4.299 -0.130 -1.717 H2 NSU 39 NSU H151 H151 H 0 0 N N N N N N 28.961 15.202 23.421 -4.321 -0.913 1.768 H151 NSU 40 NSU OXT O02 O 0 1 N Y N Y N Y 32.997 15.068 17.544 2.919 3.780 0.172 O02 NSU 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NSU O C DOUB N N 1 NSU C C03 SING N N 2 NSU C03 N04 SING N N 3 NSU C10 O09 SING N N 4 NSU C10 C05 SING N N 5 NSU N04 C05 SING N N 6 NSU N04 C11 SING N N 7 NSU O09 C08 SING N N 8 NSU C05 CA SING N N 9 NSU CA C08 SING N N 10 NSU CA N SING N N 11 NSU O22 C11 DOUB N N 12 NSU C11 C12 SING N N 13 NSU O21 C14 DOUB N N 14 NSU C12 N13 SING N N 15 NSU C14 N13 SING N N 16 NSU C14 N15 SING N N 17 NSU N13 C18 SING N N 18 NSU N15 C16 SING N N 19 NSU C18 C17 DOUB N N 20 NSU C16 C17 SING N N 21 NSU C16 O20 DOUB N N 22 NSU C17 C19 SING N N 23 NSU C10 H102 SING N N 24 NSU C10 H101 SING N N 25 NSU C03 H031 SING N N 26 NSU C03 H032 SING N N 27 NSU C05 H051 SING N N 28 NSU CA HA SING N N 29 NSU C08 H082 SING N N 30 NSU C08 H081 SING N N 31 NSU C12 H121 SING N N 32 NSU C12 H122 SING N N 33 NSU C18 H181 SING N N 34 NSU C19 H192 SING N N 35 NSU C19 H193 SING N N 36 NSU C19 H191 SING N N 37 NSU N H SING N N 38 NSU N H2 SING N N 39 NSU N15 H151 SING N N 40 NSU C OXT SING N N 41 NSU OXT HXT SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NSU SMILES ACDLabs 12.01 "OC(=O)CN(C1COCC1N)C(=O)CN1C=C(C)C(=O)NC1=O" NSU InChI InChI 1.03 "InChI=1S/C13H18N4O6/c1-7-2-16(13(22)15-12(7)21)3-10(18)17(4-11(19)20)9-6-23-5-8(9)14/h2,8-9H,3-6,14H2,1H3,(H,19,20)(H,15,21,22)/t8-,9-/m0/s1" NSU InChIKey InChI 1.03 VRGRCASITUVCPS-IUCAKERBSA-N NSU SMILES_CANONICAL CACTVS 3.385 "CC1=CN(CC(=O)N(CC(O)=O)[C@H]2COC[C@@H]2N)C(=O)NC1=O" NSU SMILES CACTVS 3.385 "CC1=CN(CC(=O)N(CC(O)=O)[CH]2COC[CH]2N)C(=O)NC1=O" NSU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=CN(C(=O)NC1=O)CC(=O)N(CC(=O)O)[C@H]2COC[C@@H]2N" NSU SMILES "OpenEye OEToolkits" 2.0.7 "CC1=CN(C(=O)NC1=O)CC(=O)N(CC(=O)O)C2COCC2N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NSU "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(3R,4R)-4-aminooxolan-3-yl]-N-[(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)acetyl]glycine" NSU "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[(3~{R},4~{R})-4-azanyloxolan-3-yl]-[2-[5-methyl-2,4-bis(oxidanylidene)pyrimidin-1-yl]ethanoyl]amino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NSU "Create component" 2022-04-07 RCSB NSU "Modify internal type" 2022-08-15 RCSB NSU "Initial release" 2023-04-05 RCSB NSU "Modify backbone" 2023-11-03 PDBE #