data_NXI # _chem_comp.id NXI _chem_comp.name "~{N}-(1~{H}-indazol-5-ylmethyl)propanamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H13 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "N-(1H-indazol-5-ylmethyl)prop-2-enamide (precursor)" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-24 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 203.240 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NXI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8AO2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NXI C1 C1 C 0 1 N N N N N N 4.593 6.264 42.323 5.665 -0.535 0.701 C1 NXI 1 NXI C2 C2 C 0 1 N N N N N N 5.155 7.675 42.286 4.202 -0.503 1.150 C2 NXI 2 NXI C3 C3 C 0 1 N N N N N N 6.113 7.966 43.421 3.331 -0.085 -0.007 C3 NXI 3 NXI C6 C4 C 0 1 N N N N N N 8.117 9.121 44.153 1.150 0.419 -0.968 C6 NXI 4 NXI C7 C5 C 0 1 Y N N N N N 9.218 8.098 44.235 -0.291 0.451 -0.526 C7 NXI 5 NXI C8 C6 C 0 1 Y N N N N N 8.997 6.878 44.862 -0.823 1.622 -0.001 C8 NXI 6 NXI C10 C7 C 0 1 Y N N N N N 11.247 6.217 44.377 -2.935 0.549 0.297 C10 NXI 7 NXI C14 C8 C 0 1 Y N N N N N 12.802 7.337 43.329 -3.477 -1.620 -0.221 C14 NXI 8 NXI C15 C9 C 0 1 Y N N N N N 11.496 7.399 43.756 -2.398 -0.637 -0.240 C15 NXI 9 NXI C16 C10 C 0 1 Y N N N N N 10.474 8.353 43.680 -1.061 -0.669 -0.650 C16 NXI 10 NXI O4 O1 O 0 1 N N N N N N 5.928 7.473 44.532 3.830 0.162 -1.084 O4 NXI 11 NXI N5 N1 N 0 1 N N N N N N 7.136 8.774 43.139 1.997 0.014 0.156 N5 NXI 12 NXI C9 C11 C 0 1 Y N N N N N 10.002 5.937 44.938 -2.126 1.677 0.407 C9 NXI 13 NXI N11 N2 N 0 1 Y N N N N N 12.376 5.484 44.316 -4.243 0.285 0.607 N11 NXI 14 NXI N13 N3 N 0 1 Y N N N N N 13.351 6.175 43.663 -4.532 -1.044 0.279 N13 NXI 15 NXI H17 H1 H 0 1 N N N N N N 3.908 6.119 41.475 5.778 -1.248 -0.115 H17 NXI 16 NXI H18 H2 H 0 1 N N N N N N 5.418 5.539 42.256 5.963 0.457 0.361 H18 NXI 17 NXI H1 H3 H 0 1 N Y N N N N 4.047 6.112 43.266 6.295 -0.837 1.538 H1 NXI 18 NXI H19 H4 H 0 1 N N N N N N 5.689 7.814 41.334 3.904 -1.494 1.490 H19 NXI 19 NXI H27 H5 H 0 1 N N N N N N 4.318 8.386 42.344 4.089 0.211 1.966 H27 NXI 20 NXI H21 H6 H 0 1 N N N N N N 8.556 10.098 43.904 1.263 -0.294 -1.785 H21 NXI 21 NXI H22 H7 H 0 1 N N N N N N 7.614 9.183 45.129 1.447 1.411 -1.308 H22 NXI 22 NXI H23 H8 H 0 1 N N N N N N 8.030 6.665 45.293 -0.200 2.500 0.086 H23 NXI 23 NXI H25 H9 H 0 1 N N N N N N 13.311 8.126 42.795 -3.412 -2.643 -0.561 H25 NXI 24 NXI H26 H10 H 0 1 N N N N N N 10.659 9.296 43.187 -0.641 -1.574 -1.064 H26 NXI 25 NXI H20 H11 H 0 1 N N N N N N 7.229 9.147 42.216 1.597 -0.184 1.018 H20 NXI 26 NXI H24 H12 H 0 1 N N N N N N 9.826 4.991 45.428 -2.528 2.593 0.813 H24 NXI 27 NXI H12 H13 H 0 1 N N N N N N 12.483 4.565 44.696 -4.869 0.918 0.993 H12 NXI 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NXI C2 C1 SING N N 1 NXI C2 C3 SING N N 2 NXI N5 C3 SING N N 3 NXI N5 C6 SING N N 4 NXI C14 N13 DOUB Y N 5 NXI C14 C15 SING Y N 6 NXI C3 O4 DOUB N N 7 NXI N13 N11 SING Y N 8 NXI C16 C15 DOUB Y N 9 NXI C16 C7 SING Y N 10 NXI C15 C10 SING Y N 11 NXI C6 C7 SING N N 12 NXI C7 C8 DOUB Y N 13 NXI N11 C10 SING Y N 14 NXI C10 C9 DOUB Y N 15 NXI C8 C9 SING Y N 16 NXI C1 H17 SING N N 17 NXI C1 H18 SING N N 18 NXI C1 H1 SING N N 19 NXI C2 H19 SING N N 20 NXI C2 H27 SING N N 21 NXI C6 H21 SING N N 22 NXI C6 H22 SING N N 23 NXI C8 H23 SING N N 24 NXI C14 H25 SING N N 25 NXI C16 H26 SING N N 26 NXI N5 H20 SING N N 27 NXI C9 H24 SING N N 28 NXI N11 H12 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NXI InChI InChI 1.06 "InChI=1S/C11H13N3O/c1-2-11(15)12-6-8-3-4-10-9(5-8)7-13-14-10/h3-5,7H,2,6H2,1H3,(H,12,15)(H,13,14)" NXI InChIKey InChI 1.06 QYEZEWINHDDRMN-UHFFFAOYSA-N NXI SMILES_CANONICAL CACTVS 3.385 "CCC(=O)NCc1ccc2[nH]ncc2c1" NXI SMILES CACTVS 3.385 "CCC(=O)NCc1ccc2[nH]ncc2c1" NXI SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCC(=O)NCc1ccc2c(c1)cn[nH]2" NXI SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC(=O)NCc1ccc2c(c1)cn[nH]2" # _pdbx_chem_comp_identifier.comp_id NXI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "~{N}-(1~{H}-indazol-5-ylmethyl)propanamide" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id NXI _pdbx_chem_comp_synonyms.name "N-(1H-indazol-5-ylmethyl)prop-2-enamide (precursor)" _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type "C=CC(=O)NCc1ccc2[nH]ncc2c1" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NXI "Create component" 2022-08-24 PDBE NXI "Initial release" 2022-09-28 RCSB NXI "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id NXI _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #