data_NXZ # _chem_comp.id NXZ _chem_comp.name "1-[(3S,4S)-4-amino-1-(6-phenylpyrimidin-4-yl)pyrrolidin-3-yl]piperidin-2-one" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H23 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-01-17 _chem_comp.pdbx_modified_date 2012-01-20 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 337.419 _chem_comp.one_letter_code ? _chem_comp.three_letter_code NXZ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3QBJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal NXZ N1 N1 N 0 1 N N N -1.840 -4.517 71.988 0.600 0.361 0.078 N1 NXZ 1 NXZ C2 C2 C 0 1 N N S -0.767 -4.955 69.997 2.228 0.486 1.832 C2 NXZ 2 NXZ C3 C3 C 0 1 N N S -1.364 -3.564 70.012 2.850 1.048 0.536 C3 NXZ 3 NXZ C4 C4 C 0 1 N N N -2.486 -3.606 71.019 1.655 1.285 -0.412 C4 NXZ 4 NXZ C5 C5 C 0 1 N N N -0.712 -5.319 71.488 0.710 0.432 1.558 C5 NXZ 5 NXZ C6 C6 C 0 1 Y N N -1.910 -6.209 76.672 -4.271 -0.238 -0.109 C6 NXZ 6 NXZ C7 C7 C 0 1 Y N N -2.536 -6.115 77.971 -5.503 0.221 -0.571 C7 NXZ 7 NXZ C8 C8 C 0 1 Y N N -2.064 -6.927 79.042 -6.656 -0.471 -0.255 C8 NXZ 8 NXZ C9 C9 C 0 1 Y N N -0.998 -7.829 78.803 -6.589 -1.616 0.517 C9 NXZ 9 NXZ C10 C10 C 0 1 Y N N -0.371 -7.948 77.514 -5.368 -2.076 0.978 C10 NXZ 10 NXZ C11 C11 C 0 1 Y N N -0.831 -7.124 76.447 -4.209 -1.393 0.668 C11 NXZ 11 NXZ C12 C12 C 0 1 Y N N -2.403 -5.344 75.558 -3.028 0.497 -0.450 C12 NXZ 12 NXZ C13 C13 C 0 1 Y N N -1.812 -5.398 74.268 -1.792 0.043 0.002 C13 NXZ 13 NXZ C14 C14 C 0 1 Y N N -2.337 -4.562 73.274 -0.655 0.770 -0.347 C14 NXZ 14 NXZ N15 N15 N 0 1 Y N N -3.411 -3.738 73.617 -0.791 1.863 -1.093 N15 NXZ 15 NXZ C16 C16 C 0 1 Y N N -3.955 -3.675 74.855 -1.980 2.261 -1.501 C16 NXZ 16 NXZ N17 N17 N 0 1 Y N N -3.460 -4.480 75.816 -3.077 1.600 -1.198 N17 NXZ 17 NXZ N18 N18 N 0 1 N N N 0.525 -4.908 69.404 2.511 1.381 2.962 N18 NXZ 18 NXZ N19 N19 N 0 1 N N N -1.773 -3.056 68.691 3.777 0.074 -0.046 N19 NXZ 19 NXZ C20 C20 C 0 1 N N N -3.006 -3.662 68.102 5.170 0.469 -0.208 C20 NXZ 20 NXZ C21 C21 C 0 1 N N N -3.127 -3.457 66.587 6.061 -0.763 -0.370 C21 NXZ 21 NXZ C22 C22 C 0 1 N N N -2.580 -2.075 66.105 5.467 -1.658 -1.464 C22 NXZ 22 NXZ C23 C23 C 0 1 N N N -1.172 -1.753 66.650 4.138 -2.225 -0.958 C23 NXZ 23 NXZ C24 C24 C 0 1 N N N -0.948 -2.125 68.117 3.293 -1.120 -0.391 C24 NXZ 24 NXZ O25 O25 O 0 1 N N N 0.014 -1.638 68.703 2.106 -1.322 -0.246 O25 NXZ 25 NXZ H2 H2 H 0 1 N N N -1.336 -5.694 69.414 2.613 -0.513 2.034 H2 NXZ 26 NXZ H3 H3 H 0 1 N N N -0.599 -2.830 70.304 3.365 1.987 0.739 H3 NXZ 27 NXZ H4 H4 H 0 1 N N N -3.432 -3.993 70.611 1.929 1.039 -1.438 H4 NXZ 28 NXZ H4A H4A H 0 1 N N N -2.740 -2.622 71.439 1.316 2.319 -0.345 H4A NXZ 29 NXZ H5 H5 H 0 1 N N N 0.245 -5.047 71.958 0.223 1.332 1.932 H5 NXZ 30 NXZ H5A H5A H 0 1 N N N -0.843 -6.396 71.668 0.273 -0.456 2.014 H5A NXZ 31 NXZ H7 H7 H 0 1 N N N -3.358 -5.432 78.129 -5.557 1.115 -1.173 H7 NXZ 32 NXZ H8 H8 H 0 1 N N N -2.512 -6.856 80.022 -7.611 -0.116 -0.612 H8 NXZ 33 NXZ H9 H9 H 0 1 N N N -0.645 -8.447 79.615 -7.493 -2.154 0.761 H9 NXZ 34 NXZ H10 H10 H 0 1 N N N 0.435 -8.650 77.358 -5.322 -2.971 1.581 H10 NXZ 35 NXZ H11 H11 H 0 1 N N N -0.369 -7.189 75.473 -3.257 -1.753 1.028 H11 NXZ 36 NXZ H13 H13 H 0 1 N N N -0.985 -6.061 74.060 -1.716 -0.849 0.607 H13 NXZ 37 NXZ H16 H16 H 0 1 N N N -4.767 -2.995 75.068 -2.055 3.153 -2.105 H16 NXZ 38 NXZ HN18 HN18 H 0 0 N N N 0.921 -5.826 69.393 2.108 1.024 3.816 HN18 NXZ 39 NXZ HN1A HN1A H 0 0 N N N 0.449 -4.567 68.467 3.503 1.531 3.066 HN1A NXZ 40 NXZ H20 H20 H 0 1 N N N -2.984 -4.744 68.300 5.266 1.101 -1.091 H20 NXZ 41 NXZ H20A H20A H 0 0 N N N -3.879 -3.195 68.581 5.490 1.028 0.671 H20A NXZ 42 NXZ H21 H21 H 0 1 N N N -2.551 -4.249 66.086 7.066 -0.454 -0.656 H21 NXZ 43 NXZ H21A H21A H 0 0 N N N -4.191 -3.519 66.315 6.101 -1.311 0.572 H21A NXZ 44 NXZ H22 H22 H 0 1 N N N -2.529 -2.089 65.006 5.295 -1.070 -2.366 H22 NXZ 45 NXZ H22A H22A H 0 0 N N N -3.270 -1.292 66.451 6.154 -2.475 -1.684 H22A NXZ 46 NXZ H23 H23 H 0 1 N N N -0.444 -2.315 66.047 3.609 -2.701 -1.784 H23 NXZ 47 NXZ H23A H23A H 0 0 N N N -1.016 -0.669 66.552 4.332 -2.963 -0.181 H23A NXZ 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal NXZ C4 N1 SING N N 1 NXZ C5 N1 SING N N 2 NXZ N1 C14 SING N N 3 NXZ N18 C2 SING N N 4 NXZ C2 C3 SING N N 5 NXZ C2 C5 SING N N 6 NXZ C2 H2 SING N N 7 NXZ N19 C3 SING N N 8 NXZ C3 C4 SING N N 9 NXZ C3 H3 SING N N 10 NXZ C4 H4 SING N N 11 NXZ C4 H4A SING N N 12 NXZ C5 H5 SING N N 13 NXZ C5 H5A SING N N 14 NXZ C12 C6 SING Y N 15 NXZ C11 C6 DOUB Y N 16 NXZ C6 C7 SING Y N 17 NXZ C7 C8 DOUB Y N 18 NXZ C7 H7 SING N N 19 NXZ C9 C8 SING Y N 20 NXZ C8 H8 SING N N 21 NXZ C10 C9 DOUB Y N 22 NXZ C9 H9 SING N N 23 NXZ C11 C10 SING Y N 24 NXZ C10 H10 SING N N 25 NXZ C11 H11 SING N N 26 NXZ C13 C12 DOUB Y N 27 NXZ C12 N17 SING Y N 28 NXZ C14 C13 SING Y N 29 NXZ C13 H13 SING N N 30 NXZ C14 N15 DOUB Y N 31 NXZ N15 C16 SING Y N 32 NXZ C16 N17 DOUB Y N 33 NXZ C16 H16 SING N N 34 NXZ N18 HN18 SING N N 35 NXZ N18 HN1A SING N N 36 NXZ C20 N19 SING N N 37 NXZ C24 N19 SING N N 38 NXZ C21 C20 SING N N 39 NXZ C20 H20 SING N N 40 NXZ C20 H20A SING N N 41 NXZ C22 C21 SING N N 42 NXZ C21 H21 SING N N 43 NXZ C21 H21A SING N N 44 NXZ C22 C23 SING N N 45 NXZ C22 H22 SING N N 46 NXZ C22 H22A SING N N 47 NXZ C23 C24 SING N N 48 NXZ C23 H23 SING N N 49 NXZ C23 H23A SING N N 50 NXZ C24 O25 DOUB N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor NXZ SMILES ACDLabs 12.01 "O=C4N(C3CN(c2ncnc(c1ccccc1)c2)CC3N)CCCC4" NXZ SMILES_CANONICAL CACTVS 3.370 "N[C@H]1CN(C[C@@H]1N2CCCCC2=O)c3cc(ncn3)c4ccccc4" NXZ SMILES CACTVS 3.370 "N[CH]1CN(C[CH]1N2CCCCC2=O)c3cc(ncn3)c4ccccc4" NXZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)c2cc(ncn2)N3C[C@@H]([C@H](C3)N4CCCCC4=O)N" NXZ SMILES "OpenEye OEToolkits" 1.7.0 "c1ccc(cc1)c2cc(ncn2)N3CC(C(C3)N4CCCCC4=O)N" NXZ InChI InChI 1.03 "InChI=1S/C19H23N5O/c20-15-11-23(12-17(15)24-9-5-4-8-19(24)25)18-10-16(21-13-22-18)14-6-2-1-3-7-14/h1-3,6-7,10,13,15,17H,4-5,8-9,11-12,20H2/t15-,17-/m0/s1" NXZ InChIKey InChI 1.03 FHAABBQZMYZFKY-RDJZCZTQSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NXZ "SYSTEMATIC NAME" ACDLabs 12.01 "1-[(3S,4S)-4-amino-1-(6-phenylpyrimidin-4-yl)pyrrolidin-3-yl]piperidin-2-one" NXZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "1-[(3S,4S)-4-azanyl-1-(6-phenylpyrimidin-4-yl)pyrrolidin-3-yl]piperidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site NXZ "Create component" 2011-01-17 RCSB NXZ "Modify aromatic_flag" 2011-06-04 RCSB NXZ "Modify descriptor" 2011-06-04 RCSB #