data_O1F
#
_chem_comp.id O1F
_chem_comp.name "(5~{Z})-5-[(2,5-dimethoxy-4-oxidanyl-phenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H11 N O4 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-08-25
_chem_comp.pdbx_modified_date 2022-11-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 297.350
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code O1F
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8AO0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
O1F N1 N1 N 0 1 N N N 20.163 8.647 -6.522 3.580 1.036 0.199 N1 O1F 1
O1F C4 C1 C 0 1 N N N 18.035 5.745 -5.999 -0.031 1.574 0.292 C4 O1F 2
O1F C5 C2 C 0 1 Y N N 15.443 2.950 -6.074 -3.546 0.354 -0.212 C5 O1F 3
O1F C6 C3 C 0 1 Y N N 16.886 4.888 -6.473 -1.186 0.679 0.175 C6 O1F 4
O1F C7 C4 C 0 1 Y N N 14.749 3.204 -7.254 -3.378 -1.013 -0.055 C7 O1F 5
O1F C8 C5 C 0 1 Y N N 16.510 3.777 -5.670 -2.460 1.205 -0.102 C8 O1F 6
O1F C10 C6 C 0 1 N N N 18.589 6.866 -6.531 1.228 1.078 0.162 C10 O1F 7
O1F C1 C7 C 0 1 N N N 16.952 2.502 -3.627 -3.947 3.005 -0.543 C1 O1F 8
O1F O3 O1 O 0 1 N N N 17.189 3.530 -4.516 -2.624 2.543 -0.263 O3 O1F 9
O1F O1 O2 O 0 1 N N N 13.735 2.396 -7.614 -4.449 -1.842 -0.163 O1 O1F 10
O1F C9 C8 C 0 1 Y N N 15.101 4.287 -8.059 -2.115 -1.541 0.215 C9 O1F 11
O1F O4 O3 O 0 1 N N N 14.394 4.493 -9.203 -1.958 -2.884 0.362 O4 O1F 12
O1F C2 C9 C 0 1 N N N 14.600 5.506 -10.118 -0.637 -3.357 0.630 C2 O1F 13
O1F C3 C10 C 0 1 Y N N 16.166 5.121 -7.665 -1.024 -0.705 0.327 C3 O1F 14
O1F S2 S1 S 0 1 N N N 18.112 7.744 -8.042 1.712 -0.556 -0.334 S2 O1F 15
O1F C12 C11 C 0 1 N N N 19.425 8.910 -7.692 3.450 -0.234 -0.201 C12 O1F 16
O1F S1 S2 S 0 1 N N N 19.705 10.032 -8.543 4.719 -1.337 -0.523 S1 O1F 17
O1F C11 C12 C 0 1 N N N 19.729 7.550 -5.882 2.498 1.767 0.407 C11 O1F 18
O1F O2 O4 O 0 1 N N N 20.250 7.167 -4.845 2.552 2.926 0.776 O2 O1F 19
O1F H8 H1 H 0 1 N N N 20.924 9.213 -6.204 4.461 1.417 0.338 H8 O1F 20
O1F H45 H2 H 0 1 N N N 18.495 5.410 -5.081 -0.180 2.627 0.482 H45 O1F 21
O1F H21 H3 H 0 1 N N N 15.160 2.108 -5.460 -4.526 0.756 -0.425 H21 O1F 22
O1F H332 H4 H 0 0 N N N 17.665 2.567 -2.792 -3.938 4.090 -0.648 H332 O1F 23
O1F H333 H5 H 0 0 N N N 15.925 2.582 -3.240 -4.301 2.554 -1.470 H333 O1F 24
O1F H331 H6 H 0 0 N N N 17.076 1.537 -4.141 -4.611 2.725 0.275 H331 O1F 25
O1F H1 H7 H 0 1 N N N 13.626 1.714 -6.962 -4.608 -2.164 -1.061 H1 O1F 26
O1F H231 H8 H 0 0 N N N 13.874 5.413 -10.939 0.024 -3.073 -0.189 H231 O1F 27
O1F H232 H9 H 0 0 N N N 14.470 6.479 -9.622 -0.274 -2.917 1.559 H232 O1F 28
O1F H233 H10 H 0 0 N N N 15.621 5.433 -10.522 -0.652 -4.443 0.725 H233 O1F 29
O1F H32 H11 H 0 1 N N N 16.438 5.959 -8.290 -0.047 -1.115 0.535 H32 O1F 30
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
O1F C2 O4 SING N N 1
O1F O4 C9 SING N N 2
O1F S1 C12 DOUB N N 3
O1F C9 C3 DOUB Y N 4
O1F C9 C7 SING Y N 5
O1F S2 C12 SING N N 6
O1F S2 C10 SING N N 7
O1F C12 N1 SING N N 8
O1F C3 C6 SING Y N 9
O1F O1 C7 SING N N 10
O1F C7 C5 DOUB Y N 11
O1F C10 C4 DOUB N Z 12
O1F C10 C11 SING N N 13
O1F N1 C11 SING N N 14
O1F C6 C4 SING N N 15
O1F C6 C8 DOUB Y N 16
O1F C5 C8 SING Y N 17
O1F C11 O2 DOUB N N 18
O1F C8 O3 SING N N 19
O1F O3 C1 SING N N 20
O1F N1 H8 SING N N 21
O1F C4 H45 SING N N 22
O1F C5 H21 SING N N 23
O1F C1 H332 SING N N 24
O1F C1 H333 SING N N 25
O1F C1 H331 SING N N 26
O1F O1 H1 SING N N 27
O1F C2 H231 SING N N 28
O1F C2 H232 SING N N 29
O1F C2 H233 SING N N 30
O1F C3 H32 SING N N 31
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
O1F InChI InChI 1.06 "InChI=1S/C12H11NO4S2/c1-16-8-5-7(14)9(17-2)3-6(8)4-10-11(15)13-12(18)19-10/h3-5,14H,1-2H3,(H,13,15,18)/b10-4-"
O1F InChIKey InChI 1.06 UFTHKGPBVJJXLR-WMZJFQQLSA-N
O1F SMILES_CANONICAL CACTVS 3.385 "COc1cc(\C=C2/SC(=S)NC2=O)c(OC)cc1O"
O1F SMILES CACTVS 3.385 "COc1cc(C=C2SC(=S)NC2=O)c(OC)cc1O"
O1F SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "COc1cc(c(cc1O)OC)/C=C\2/C(=O)NC(=S)S2"
O1F SMILES "OpenEye OEToolkits" 3.1.0.0 "COc1cc(c(cc1O)OC)C=C2C(=O)NC(=S)S2"
#
_pdbx_chem_comp_identifier.comp_id O1F
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 3.1.0.0
_pdbx_chem_comp_identifier.identifier "(5~{Z})-5-[(2,5-dimethoxy-4-oxidanyl-phenyl)methylidene]-2-sulfanylidene-1,3-thiazolidin-4-one"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
O1F "Create component" 2022-08-25 PDBE
O1F "Initial release" 2022-11-23 RCSB
#