data_O1O # _chem_comp.id O1O _chem_comp.name "1-methyl-3-[2-methyl-6-methylsulfonyl-3-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-phenyl]-6-(trifluoromethyl)pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H19 F3 N2 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-20 _chem_comp.pdbx_modified_date 2023-12-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 500.445 _chem_comp.one_letter_code ? _chem_comp.three_letter_code O1O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HYS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal O1O C13 C1 C 0 1 N N N N N N 6.004 -5.891 84.315 7.479 -0.405 -0.612 C13 O1O 1 O1O C15 C2 C 0 1 N N N N N N 3.572 -5.389 84.207 5.139 -0.045 -1.278 C15 O1O 2 O1O C20 C3 C 0 1 N N N N N N -3.269 -5.132 84.338 -3.410 -0.898 1.237 C20 O1O 3 O1O C21 C4 C 0 1 N N N N N N -4.178 -4.524 83.534 -4.073 -0.879 0.061 C21 O1O 4 O1O C26 C5 C 0 1 N N N N N N -4.707 -2.593 82.078 -4.146 -0.448 -2.350 C26 O1O 5 O1O C1 C6 C 0 1 Y N N N N N 1.930 -2.772 83.591 2.229 -0.234 0.104 C1 O1O 6 O1O C2 C7 C 0 1 Y N N N N N 2.182 -1.790 84.536 2.542 1.124 0.198 C2 O1O 7 O1O C3 C8 C 0 1 Y N N N N N 1.145 -1.331 85.332 1.532 2.061 0.268 C3 O1O 8 O1O C4 C9 C 0 1 Y N N N N N -0.144 -1.841 85.205 0.208 1.661 0.247 C4 O1O 9 O1O C5 C10 C 0 1 Y N N N N N -0.406 -2.825 84.244 -0.114 0.312 0.154 C5 O1O 10 O1O C6 C11 C 0 1 Y N N N N N 0.643 -3.277 83.444 0.893 -0.637 0.082 C6 O1O 11 O1O C7 C12 C 0 1 N N N N N N 0.398 -4.355 82.386 0.547 -2.100 -0.019 C7 O1O 12 O1O C8 C13 C 0 1 N N N N N N 3.057 -3.274 82.682 3.309 -1.241 0.023 C8 O1O 13 O1O C9 C14 C 0 1 N N N N N N 3.923 -4.482 83.023 4.709 -0.808 -0.101 C9 O1O 14 O1O C11 C15 C 0 1 N N N N N N 5.033 -4.696 82.332 5.614 -1.120 0.887 C11 O1O 15 O1O C12 C16 C 0 1 N N N N N N 6.068 -5.710 82.805 7.052 -0.697 0.826 C12 O1O 16 O1O C14 C17 C 0 1 N N N N N N 4.615 -6.388 84.701 6.505 0.607 -1.232 C14 O1O 17 O1O C19 C18 C 0 1 N N N N N N -2.054 -4.582 84.571 -2.057 -0.485 1.273 C19 O1O 18 O1O C23 C19 C 0 1 N N N N N N -2.613 -2.821 83.211 -2.139 -0.083 -1.028 C23 O1O 19 O1O C30 C20 C 0 1 N N N N N N -2.611 -2.320 86.957 -1.879 2.550 1.932 C30 O1O 20 O1O C31 C21 C 0 1 N N N N N N -5.513 -5.283 83.362 -5.514 -1.313 -0.003 C31 O1O 21 O1O F32 F1 F 0 1 N N N N N N -5.324 -6.314 82.483 -5.635 -2.399 -0.876 F32 O1O 22 O1O F33 F2 F 0 1 N N N N N N -5.837 -5.822 84.576 -5.945 -1.690 1.273 F33 O1O 23 O1O F34 F3 F 0 1 N N N N N N -6.583 -4.537 82.945 -6.301 -0.253 -0.466 F34 O1O 24 O1O N18 N1 N 0 1 N N N N N N -1.725 -3.427 84.019 -1.457 -0.087 0.132 N18 O1O 25 O1O N22 N2 N 0 1 N N N N N N -3.838 -3.357 82.966 -3.429 -0.463 -1.073 N22 O1O 26 O1O O10 O1 O 0 1 N N N N N N 3.272 -2.696 81.661 3.039 -2.426 0.057 O10 O1O 27 O1O O16 O2 O 0 1 N N N N N N 5.302 -3.994 81.148 5.194 -1.828 1.946 O16 O1O 28 O1O O17 O3 O 0 1 N N N N N N 2.508 -5.338 84.729 4.425 0.060 -2.253 O17 O1O 29 O1O O24 O4 O 0 1 N N N N N N -2.312 -1.790 82.716 -1.582 0.268 -2.050 O24 O1O 30 O1O O25 O5 O 0 1 N N N N N N -1.283 -5.133 85.278 -1.440 -0.488 2.323 O25 O1O 31 O1O O28 O6 O 0 1 N N N N N N -0.789 -0.366 87.389 -0.387 4.109 0.363 O28 O1O 32 O1O O29 O7 O 0 1 N N N N N N -2.097 -0.048 85.584 -1.945 2.532 -0.735 O29 O1O 33 O1O S27 S1 S 0 1 N N N N N N -1.411 -1.128 86.303 -1.074 2.865 0.337 S27 O1O 34 O1O H1 H1 H 0 1 N N N N N N 6.759 -6.627 84.630 8.486 0.011 -0.615 H1 O1O 35 O1O H2 H2 H 0 1 N N N N N N 6.201 -4.929 84.810 7.464 -1.327 -1.192 H2 O1O 36 O1O H3 H3 H 0 1 N N N N N N -3.520 -6.074 84.802 -3.907 -1.220 2.140 H3 O1O 37 O1O H4 H4 H 0 1 N N N N N N -5.664 -3.122 81.956 -3.476 -0.105 -3.139 H4 O1O 38 O1O H5 H5 H 0 1 N N N N N N -4.891 -1.599 82.511 -4.495 -1.454 -2.583 H5 O1O 39 O1O H6 H6 H 0 1 N N N N N N -4.222 -2.481 81.097 -4.999 0.226 -2.280 H6 O1O 40 O1O H7 H7 H 0 1 N N N N N N 3.177 -1.386 84.651 3.574 1.440 0.216 H7 O1O 41 O1O H8 H8 H 0 1 N N N N N N 1.341 -0.563 86.065 1.776 3.111 0.341 H8 O1O 42 O1O H9 H9 H 0 1 N N N N N N 0.551 -5.349 82.832 0.575 -2.549 0.974 H9 O1O 43 O1O H10 H10 H 0 1 N N N N N N -0.634 -4.276 82.014 -0.453 -2.209 -0.438 H10 O1O 44 O1O H11 H11 H 0 1 N N N N N N 1.100 -4.216 81.551 1.268 -2.601 -0.665 H11 O1O 45 O1O H12 H12 H 0 1 N N N N N N 5.873 -6.677 82.318 7.677 -1.495 1.229 H12 O1O 46 O1O H13 H13 H 0 1 N N N N N N 7.072 -5.356 82.527 7.187 0.200 1.429 H13 O1O 47 O1O H14 H14 H 0 1 N N N N N N 4.548 -6.480 85.795 6.466 1.507 -0.618 H14 O1O 48 O1O H15 H15 H 0 1 N N N N N N 4.433 -7.369 84.238 6.829 0.860 -2.242 H15 O1O 49 O1O H16 H16 H 0 1 N N N N N N -3.331 -1.798 87.605 -1.158 2.691 2.737 H16 O1O 50 O1O H17 H17 H 0 1 N N N N N N -3.147 -2.796 86.123 -2.709 3.244 2.064 H17 O1O 51 O1O H18 H18 H 0 1 N N N N N N -2.083 -3.089 87.540 -2.254 1.527 1.954 H18 O1O 52 O1O H19 H19 H 0 1 N N N N N N 4.635 -3.331 81.014 4.281 -2.146 1.927 H19 O1O 53 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal O1O O16 C11 SING N N 1 O1O O10 C8 DOUB N N 2 O1O C26 N22 SING N N 3 O1O C11 C12 SING N N 4 O1O C11 C9 DOUB N N 5 O1O C7 C6 SING N N 6 O1O F32 C31 SING N N 7 O1O C8 C9 SING N N 8 O1O C8 C1 SING N N 9 O1O O24 C23 DOUB N N 10 O1O C12 C13 SING N N 11 O1O F34 C31 SING N N 12 O1O N22 C23 SING N N 13 O1O N22 C21 SING N N 14 O1O C9 C15 SING N N 15 O1O C23 N18 SING N N 16 O1O C31 C21 SING N N 17 O1O C31 F33 SING N N 18 O1O C6 C1 DOUB Y N 19 O1O C6 C5 SING Y N 20 O1O C21 C20 DOUB N N 21 O1O C1 C2 SING Y N 22 O1O N18 C5 SING N N 23 O1O N18 C19 SING N N 24 O1O C15 C14 SING N N 25 O1O C15 O17 DOUB N N 26 O1O C5 C4 DOUB Y N 27 O1O C13 C14 SING N N 28 O1O C20 C19 SING N N 29 O1O C2 C3 DOUB Y N 30 O1O C19 O25 DOUB N N 31 O1O C4 C3 SING Y N 32 O1O C4 S27 SING N N 33 O1O O29 S27 DOUB N N 34 O1O S27 C30 SING N N 35 O1O S27 O28 DOUB N N 36 O1O C13 H1 SING N N 37 O1O C13 H2 SING N N 38 O1O C20 H3 SING N N 39 O1O C26 H4 SING N N 40 O1O C26 H5 SING N N 41 O1O C26 H6 SING N N 42 O1O C2 H7 SING N N 43 O1O C3 H8 SING N N 44 O1O C7 H9 SING N N 45 O1O C7 H10 SING N N 46 O1O C7 H11 SING N N 47 O1O C12 H12 SING N N 48 O1O C12 H13 SING N N 49 O1O C14 H14 SING N N 50 O1O C14 H15 SING N N 51 O1O C30 H16 SING N N 52 O1O C30 H17 SING N N 53 O1O C30 H18 SING N N 54 O1O O16 H19 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor O1O InChI InChI 1.06 "InChI=1S/C21H19F3N2O7S/c1-10-11(19(30)17-12(27)5-4-6-13(17)28)7-8-14(34(3,32)33)18(10)26-16(29)9-15(21(22,23)24)25(2)20(26)31/h7-9,27H,4-6H2,1-3H3" O1O InChIKey InChI 1.06 NTLFNUWOCZJCOH-UHFFFAOYSA-N O1O SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(C(=O)C=C1C(F)(F)F)c2c(C)c(ccc2[S](C)(=O)=O)C(=O)C3=C(O)CCCC3=O" O1O SMILES CACTVS 3.385 "CN1C(=O)N(C(=O)C=C1C(F)(F)F)c2c(C)c(ccc2[S](C)(=O)=O)C(=O)C3=C(O)CCCC3=O" O1O SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(ccc(c1N2C(=O)C=C(N(C2=O)C)C(F)(F)F)S(=O)(=O)C)C(=O)C3=C(CCCC3=O)O" O1O SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(ccc(c1N2C(=O)C=C(N(C2=O)C)C(F)(F)F)S(=O)(=O)C)C(=O)C3=C(CCCC3=O)O" # _pdbx_chem_comp_identifier.comp_id O1O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1-methyl-3-[2-methyl-6-methylsulfonyl-3-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-phenyl]-6-(trifluoromethyl)pyrimidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site O1O "Create component" 2023-01-20 PDBJ O1O "Initial release" 2023-12-20 RCSB #