data_O2I # _chem_comp.id O2I _chem_comp.name "4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H13 F2 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-20 _chem_comp.pdbx_modified_date 2024-06-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 365.333 _chem_comp.one_letter_code ? _chem_comp.three_letter_code O2I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8HZD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal O2I C10 C1 C 0 1 Y N N N N N -21.266 4.837 -31.929 3.444 -0.284 -0.063 C10 O2I 1 O2I C13 C2 C 0 1 Y N N N N N -23.494 5.568 -32.525 5.089 1.468 0.056 C13 O2I 2 O2I C15 C3 C 0 1 Y N N N N N -24.002 4.318 -32.186 4.071 2.417 0.040 C15 O2I 3 O2I C20 C4 C 0 1 Y N N N N N -16.557 -2.272 -27.844 -5.706 -0.094 0.041 C20 O2I 4 O2I C21 C5 C 0 1 Y N N N N N -17.962 -0.816 -29.116 -3.345 0.308 -0.014 C21 O2I 5 O2I C22 C6 C 0 1 Y N N N N N -17.611 -3.168 -27.705 -5.931 1.286 0.010 C22 O2I 6 O2I C24 C7 C 0 1 Y N N N N N -18.844 -2.885 -28.267 -4.850 2.171 -0.037 C24 O2I 7 O2I C01 C8 C 0 1 N N N N N N -17.420 1.533 -29.667 -1.752 -1.543 0.008 C01 O2I 8 O2I C02 C9 C 0 1 N N N N N N -17.694 2.855 -30.391 -0.383 -2.061 -0.011 C02 O2I 9 O2I C03 C10 C 0 1 N N N N N N -18.802 4.453 -31.317 1.794 -2.114 -0.066 C03 O2I 10 O2I C04 C11 C 0 1 N N N N N N -17.463 4.794 -31.294 1.295 -3.500 -0.002 C04 O2I 11 O2I C07 C12 C 0 1 N N N N N N -15.380 3.770 -30.487 -0.996 -4.516 0.098 C07 O2I 12 O2I C09 C13 C 0 1 N N N N N N -19.775 5.202 -31.823 3.114 -1.709 -0.118 C09 O2I 13 O2I C11 C14 C 0 1 Y N N N N N -22.133 5.817 -32.394 4.784 0.126 0.006 C11 O2I 14 O2I C12 C15 C 0 1 Y N N N N N -21.784 3.591 -31.595 2.423 0.677 -0.085 C12 O2I 15 O2I C14 C16 C 0 1 Y N N N N N -23.147 3.338 -31.723 2.740 2.017 -0.034 C14 O2I 16 O2I C19 C17 C 0 1 Y N N N N N -16.733 -1.091 -28.551 -4.429 -0.578 0.029 C19 O2I 17 O2I C23 C18 C 0 1 Y N N N N N -19.013 -1.703 -28.964 -3.572 1.689 -0.055 C23 O2I 18 O2I C25 C19 C 0 1 N N N N N N -17.409 -4.461 -26.920 -7.271 1.793 0.028 C25 O2I 19 O2I C27 C20 C 0 1 N N N N N N -18.199 0.487 -29.880 -1.970 -0.212 -0.032 C27 O2I 20 O2I F16 F1 F 0 1 N N N N N N -23.680 2.121 -31.401 1.757 2.943 -0.049 F16 O2I 21 O2I F17 F2 F 0 1 N N N N N N -24.313 6.561 -32.991 6.379 1.864 0.122 F17 O2I 22 O2I N05 N1 N 0 1 N N N N N N -18.907 3.263 -30.751 0.694 -1.316 -0.064 N05 O2I 23 O2I N06 N2 N 0 1 N N N N N N -16.813 3.803 -30.717 -0.052 -3.399 0.032 N06 O2I 24 O2I N26 N3 N 0 1 N N N N N N -17.247 -5.417 -26.331 -8.333 2.195 0.042 N26 O2I 25 O2I O08 O1 O 0 1 N N N N N N -16.967 5.789 -31.716 1.958 -4.522 0.015 O08 O2I 26 O2I O18 O2 O 0 1 N N N N N N -25.369 4.019 -32.304 4.378 3.740 0.090 O18 O2I 27 O2I H1 H1 H 0 1 N N N N N N -15.598 -2.496 -27.400 -6.542 -0.777 0.078 H1 O2I 28 O2I H2 H2 H 0 1 N N N N N N -19.664 -3.579 -28.162 -5.025 3.237 -0.061 H2 O2I 29 O2I H3 H3 H 0 1 N N N N N N -16.589 1.456 -28.982 -2.587 -2.227 0.053 H3 O2I 30 O2I H5 H5 H 0 1 N N N N N N -15.110 2.827 -29.990 -0.446 -5.457 0.116 H5 O2I 31 O2I H6 H6 H 0 1 N N N N N N -14.853 3.841 -31.450 -1.598 -4.430 1.003 H6 O2I 32 O2I H7 H7 H 0 1 N N N N N N -15.092 4.617 -29.847 -1.648 -4.494 -0.775 H7 O2I 33 O2I H8 H8 H 0 1 N N N N N N -19.489 6.172 -32.201 3.901 -2.443 -0.199 H8 O2I 34 O2I H10 H10 H 0 1 N N N N N N -21.743 6.789 -32.658 5.575 -0.610 0.019 H10 O2I 35 O2I H11 H11 H 0 1 N N N N N N -21.125 2.815 -31.234 1.390 0.367 -0.142 H11 O2I 36 O2I H12 H12 H 0 1 N N N N N N -15.916 -0.393 -28.658 -4.255 -1.643 0.061 H12 O2I 37 O2I H13 H13 H 0 1 N N N N N N -19.976 -1.470 -29.394 -2.737 2.373 -0.087 H13 O2I 38 O2I H14 H14 H 0 1 N N N N N N -19.005 0.553 -30.596 -1.135 0.471 -0.077 H14 O2I 39 O2I H15 H15 H 0 1 N N N N N N -25.523 3.123 -32.027 4.504 4.147 -0.778 H15 O2I 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal O2I F17 C13 SING N N 1 O2I C13 C11 DOUB Y N 2 O2I C13 C15 SING Y N 3 O2I C11 C10 SING Y N 4 O2I O18 C15 SING N N 5 O2I C15 C14 DOUB Y N 6 O2I C10 C09 SING N N 7 O2I C10 C12 DOUB Y N 8 O2I C09 C03 DOUB N Z 9 O2I C14 C12 SING Y N 10 O2I C14 F16 SING N N 11 O2I O08 C04 DOUB N N 12 O2I C03 C04 SING N N 13 O2I C03 N05 SING N N 14 O2I C04 N06 SING N N 15 O2I N05 C02 DOUB N N 16 O2I N06 C07 SING N N 17 O2I N06 C02 SING N N 18 O2I C02 C01 SING N N 19 O2I C27 C01 DOUB N E 20 O2I C27 C21 SING N N 21 O2I C21 C23 DOUB Y N 22 O2I C21 C19 SING Y N 23 O2I C23 C24 SING Y N 24 O2I C19 C20 DOUB Y N 25 O2I C24 C22 DOUB Y N 26 O2I C20 C22 SING Y N 27 O2I C22 C25 SING N N 28 O2I C25 N26 TRIP N N 29 O2I C20 H1 SING N N 30 O2I C24 H2 SING N N 31 O2I C01 H3 SING N N 32 O2I C07 H5 SING N N 33 O2I C07 H6 SING N N 34 O2I C07 H7 SING N N 35 O2I C09 H8 SING N N 36 O2I C11 H10 SING N N 37 O2I C12 H11 SING N N 38 O2I C19 H12 SING N N 39 O2I C23 H13 SING N N 40 O2I C27 H14 SING N N 41 O2I O18 H15 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor O2I InChI InChI 1.06 "InChI=1S/C20H13F2N3O2/c1-25-18(7-6-12-2-4-13(11-23)5-3-12)24-17(20(25)27)10-14-8-15(21)19(26)16(22)9-14/h2-10,26H,1H3/b7-6+,17-10-" O2I InChIKey InChI 1.06 LESKMMBFOZYPDE-SVHBSCFYSA-N O2I SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)/C(=C/c2cc(F)c(O)c(F)c2)N=C1/C=C/c3ccc(cc3)C#N" O2I SMILES CACTVS 3.385 "CN1C(=O)C(=Cc2cc(F)c(O)c(F)c2)N=C1C=Cc3ccc(cc3)C#N" O2I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN1C(=N/C(=C\c2cc(c(c(c2)F)O)F)/C1=O)/C=C/c3ccc(cc3)C#N" O2I SMILES "OpenEye OEToolkits" 2.0.7 "CN1C(=NC(=Cc2cc(c(c(c2)F)O)F)C1=O)C=Cc3ccc(cc3)C#N" # _pdbx_chem_comp_identifier.comp_id O2I _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[(~{E})-2-[(4~{Z})-4-[[3,5-bis(fluoranyl)-4-oxidanyl-phenyl]methylidene]-1-methyl-5-oxidanylidene-imidazol-2-yl]ethenyl]benzenecarbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site O2I "Create component" 2023-01-20 PDBJ O2I "Initial release" 2024-06-19 RCSB #