data_O3U # _chem_comp.id O3U _chem_comp.name "N-[(1R)-1,5-dicyano-4-(methylsulfanyl)-3-azaspiro[5.5]undeca-2,4-dien-2-yl]acetamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H18 N4 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-16 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 302.395 _chem_comp.one_letter_code ? _chem_comp.three_letter_code O3U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GF7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal O3U N1 N1 N 0 1 N N N N N N 8.391 -3.862 21.837 -1.674 2.021 0.162 N1 O3U 1 O3U N3 N2 N 0 1 N N N N N N 5.663 -5.177 20.104 0.830 0.606 3.152 N3 O3U 2 O3U C4 C1 C 0 1 N N N N N N 5.478 -5.508 23.689 1.451 0.104 -0.190 C4 O3U 3 O3U C5 C2 C 0 1 N N N N N N 4.508 -4.301 23.765 1.579 0.583 -1.636 C5 O3U 4 O3U C6 C3 C 0 1 N N N N N N 3.111 -4.628 24.281 2.237 1.964 -1.659 C6 O3U 5 O3U C7 C4 C 0 1 N N N N N N 2.496 -5.761 23.492 3.626 1.877 -1.024 C7 O3U 6 O3U C8 C5 C 0 1 N N N N N N 3.356 -7.003 23.597 3.497 1.398 0.424 C8 O3U 7 O3U C10 C6 C 0 1 N N R N N N 6.352 -4.962 22.565 0.584 1.086 0.601 C10 O3U 8 O3U C13 C7 C 0 1 N N N N N N 9.049 -2.530 19.915 -3.867 3.097 -0.231 C13 O3U 9 O3U C14 C8 C 0 1 N N N N N N 5.938 -5.093 21.213 0.723 0.815 2.041 C14 O3U 10 O3U C11 C9 C 0 1 N N N N N N 7.613 -4.523 22.772 -0.858 0.923 0.197 C11 O3U 11 O3U C12 C10 C 0 1 N N N N N N 7.965 -3.039 20.838 -2.968 1.888 -0.193 C12 O3U 12 O3U O O1 O 0 1 N N N N N N 6.823 -2.586 20.793 -3.408 0.796 -0.481 O O3U 13 O3U N2 N3 N 0 1 N N N N N N 8.192 -4.680 23.993 -1.342 -0.242 -0.119 N2 O3U 14 O3U C1 C11 C 0 1 N N N N N N 7.574 -5.264 25.063 -0.576 -1.350 -0.146 C1 O3U 15 O3U S S1 S 0 1 N N N N N N 8.474 -5.336 26.567 -1.342 -2.937 -0.157 S O3U 16 O3U C C12 C 0 1 N N N N N N 10.168 -5.520 26.002 -3.084 -2.446 -0.124 C O3U 17 O3U C2 C13 C 0 1 N N N N N N 6.304 -5.731 24.955 0.799 -1.257 -0.166 C2 O3U 18 O3U C3 C14 C 0 1 N N N N N N 5.743 -6.505 26.002 1.603 -2.442 -0.165 C3 O3U 19 O3U N N4 N 0 1 N N N N N N 5.259 -7.147 26.820 2.240 -3.382 -0.164 N O3U 20 O3U C9 C15 C 0 1 N N N N N N 4.765 -6.744 23.080 2.838 0.017 0.447 C9 O3U 21 O3U H1 H1 H 0 1 N N N N N N 9.379 -4.005 21.902 -1.323 2.894 0.397 H1 O3U 22 O3U H2 H2 H 0 1 N N N N N N 4.951 -3.549 24.434 2.192 -0.121 -2.200 H2 O3U 23 O3U H3 H3 H 0 1 N N N N N N 4.408 -3.879 22.754 0.589 0.645 -2.088 H3 O3U 24 O3U H4 H4 H 0 1 N N N N N N 2.474 -3.736 24.186 2.330 2.306 -2.690 H4 O3U 25 O3U H5 H5 H 0 1 N N N N N N 3.177 -4.921 25.339 1.624 2.668 -1.097 H5 O3U 26 O3U H6 H6 H 0 1 N N N N N N 2.414 -5.465 22.436 4.240 1.173 -1.586 H6 O3U 27 O3U H7 H7 H 0 1 N N N N N N 1.494 -5.979 23.891 4.096 2.861 -1.040 H7 O3U 28 O3U H8 H8 H 0 1 N N N N N N 2.898 -7.807 23.003 4.487 1.336 0.876 H8 O3U 29 O3U H9 H9 H 0 1 N N N N N N 3.412 -7.312 24.651 2.884 2.103 0.986 H9 O3U 30 O3U H10 H10 H 0 1 N N N N N N 5.925 -3.952 22.655 0.906 2.106 0.391 H10 O3U 31 O3U H11 H11 H 0 1 N N N N N N 8.637 -1.747 19.261 -3.299 3.981 0.057 H11 O3U 32 O3U H12 H12 H 0 1 N N N N N N 9.873 -2.113 20.512 -4.257 3.228 -1.240 H12 O3U 33 O3U H13 H13 H 0 1 N N N N N N 9.426 -3.360 19.300 -4.696 2.955 0.463 H13 O3U 34 O3U H14 H14 H 0 1 N N N N N N 10.841 -5.577 26.871 -3.713 -3.336 -0.127 H14 O3U 35 O3U H15 H15 H 0 1 N N N N N N 10.258 -6.441 25.407 -3.280 -1.865 0.777 H15 O3U 36 O3U H16 H16 H 0 1 N N N N N N 10.444 -4.654 25.382 -3.307 -1.840 -1.002 H16 O3U 37 O3U H17 H17 H 0 1 N N N N N N 5.376 -7.632 23.300 2.744 -0.323 1.478 H17 O3U 38 O3U H18 H18 H 0 1 N N N N N N 4.706 -6.600 21.991 3.452 -0.688 -0.114 H18 O3U 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal O3U C13 C12 SING N N 1 O3U N3 C14 TRIP N N 2 O3U O C12 DOUB N N 3 O3U C12 N1 SING N N 4 O3U C14 C10 SING N N 5 O3U N1 C11 SING N N 6 O3U C10 C11 SING N N 7 O3U C10 C4 SING N N 8 O3U C11 N2 DOUB N N 9 O3U C9 C8 SING N N 10 O3U C9 C4 SING N N 11 O3U C7 C8 SING N N 12 O3U C7 C6 SING N N 13 O3U C4 C5 SING N N 14 O3U C4 C2 SING N N 15 O3U C5 C6 SING N N 16 O3U N2 C1 SING N N 17 O3U C2 C1 DOUB N N 18 O3U C2 C3 SING N N 19 O3U C1 S SING N N 20 O3U C S SING N N 21 O3U C3 N TRIP N N 22 O3U N1 H1 SING N N 23 O3U C5 H2 SING N N 24 O3U C5 H3 SING N N 25 O3U C6 H4 SING N N 26 O3U C6 H5 SING N N 27 O3U C7 H6 SING N N 28 O3U C7 H7 SING N N 29 O3U C8 H8 SING N N 30 O3U C8 H9 SING N N 31 O3U C10 H10 SING N N 32 O3U C13 H11 SING N N 33 O3U C13 H12 SING N N 34 O3U C13 H13 SING N N 35 O3U C H14 SING N N 36 O3U C H15 SING N N 37 O3U C H16 SING N N 38 O3U C9 H17 SING N N 39 O3U C9 H18 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor O3U SMILES ACDLabs 12.01 "CC(=O)NC1=NC(SC)=C(C#N)C2(CCCCC2)C1C#N" O3U InChI InChI 1.06 "InChI=1S/C15H18N4OS/c1-10(20)18-13-11(8-16)15(6-4-3-5-7-15)12(9-17)14(19-13)21-2/h11H,3-7H2,1-2H3,(H,18,19,20)/t11-/m1/s1" O3U InChIKey InChI 1.06 NZKPFLQQMFCJHQ-LLVKDONJSA-N O3U SMILES_CANONICAL CACTVS 3.385 "CSC1=C(C#N)C2(CCCCC2)[C@H](C#N)C(=N1)NC(C)=O" O3U SMILES CACTVS 3.385 "CSC1=C(C#N)C2(CCCCC2)[CH](C#N)C(=N1)NC(C)=O" O3U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1=NC(=C(C2(C1C#N)CCCCC2)C#N)SC" O3U SMILES "OpenEye OEToolkits" 2.0.7 "CC(=O)NC1=NC(=C(C2(C1C#N)CCCCC2)C#N)SC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier O3U "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(1R)-1,5-dicyano-4-(methylsulfanyl)-3-azaspiro[5.5]undeca-2,4-dien-2-yl]acetamide" O3U "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-(1,5-dicyano-4-methylsulfanyl-3-azaspiro[5.5]undeca-2,4-dien-2-yl)ethanamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site O3U "Create component" 2023-08-16 RCSB O3U "Initial release" 2023-11-08 RCSB #