data_O7C # _chem_comp.id O7C _chem_comp.name "1,4-dimethyl-5-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(phenylmethyl)benzimidazol-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H22 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-01-26 _chem_comp.pdbx_modified_date 2023-12-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 390.432 _chem_comp.one_letter_code ? _chem_comp.three_letter_code O7C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8I15 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal O7C C10 C1 C 0 1 Y N N N N N 1.200 -2.583 85.071 1.199 -0.136 0.158 C10 O7C 1 O7C C13 C2 C 0 1 Y N N N N N 0.486 -1.090 87.122 0.482 -2.164 -0.918 C13 O7C 2 O7C C15 C3 C 0 1 Y N N N N N -1.367 -2.401 85.734 -1.093 -0.833 0.341 C15 O7C 3 O7C C17 C4 C 0 1 N N N N N N -0.583 -3.911 83.649 -0.401 1.290 1.477 C17 O7C 4 O7C C22 C5 C 0 1 N N N N N N -2.206 -0.207 88.711 -2.170 -3.905 -1.337 C22 O7C 5 O7C C24 C6 C 0 1 Y N N N N N -3.617 -4.775 85.407 -3.907 1.041 0.561 C24 O7C 6 O7C C26 C7 C 0 1 Y N N N N N -3.218 -6.482 87.384 -5.880 1.697 -0.626 C26 O7C 7 O7C C28 C8 C 0 1 Y N N N N N -3.828 -7.358 84.976 -3.912 3.055 -0.734 C28 O7C 8 O7C C1 C9 C 0 1 N N N N N N 5.583 -5.506 84.266 5.716 1.050 -1.269 C1 O7C 9 O7C C2 C10 C 0 1 N N N N N N 5.737 -5.569 85.782 6.476 0.242 -0.218 C2 O7C 10 O7C C3 C11 C 0 1 N N N N N N 4.422 -5.703 86.548 5.682 -1.029 0.113 C3 O7C 11 O7C C4 C12 C 0 1 N N N N N N 3.307 -4.760 86.113 4.365 -0.598 0.722 C4 O7C 12 O7C C5 C13 C 0 1 N N N N N N 3.415 -4.063 84.749 3.663 0.530 0.100 C5 O7C 13 O7C C6 C14 C 0 1 N N N N N N 4.569 -4.451 83.832 4.303 1.309 -0.834 C6 O7C 14 O7C C9 C15 C 0 1 N N N N N N 2.341 -3.100 84.198 2.272 0.827 0.476 C9 O7C 15 O7C C12 C16 C 0 1 Y N N N N N 1.566 -1.650 86.214 1.480 -1.264 -0.620 C12 O7C 16 O7C C14 C17 C 0 1 Y N N N N N -0.986 -1.487 86.854 -0.808 -1.953 -0.447 C14 O7C 17 O7C C16 C18 C 0 1 Y N N N N N -0.253 -2.973 84.811 -0.095 0.076 0.638 C16 O7C 18 O7C C19 C19 C 0 1 N N N N N N -3.341 -1.744 86.910 -2.963 -2.003 0.084 C19 O7C 19 O7C C23 C20 C 0 1 N N N N N N -3.681 -3.336 84.914 -3.190 0.073 1.466 C23 O7C 20 O7C C25 C21 C 0 1 Y N N N N N -3.282 -5.049 86.867 -5.222 0.809 0.204 C25 O7C 21 O7C C27 C22 C 0 1 Y N N N N N -3.487 -7.643 86.437 -5.223 2.817 -1.100 C27 O7C 22 O7C C29 C23 C 0 1 Y N N N N N -3.899 -5.927 84.453 -3.252 2.164 0.092 C29 O7C 23 O7C N18 N1 N 0 1 N N N N N N -2.191 -1.092 87.564 -1.997 -2.658 -0.586 N18 O7C 24 O7C N20 N2 N 0 1 N N N N N N -2.829 -2.544 85.779 -2.450 -0.897 0.655 N20 O7C 25 O7C O7 O1 O 0 1 N N N N N N 4.756 -3.758 82.627 3.641 2.341 -1.377 O7 O7C 26 O7C O8 O2 O 0 1 N N N N N N 2.365 -4.623 86.834 3.905 -1.166 1.691 O8 O7C 27 O7C O11 O3 O 0 1 N N N N N N 2.397 -2.706 83.074 2.006 1.867 1.048 O11 O7C 28 O7C O21 O4 O 0 1 N N N N N N -4.480 -1.653 87.222 -4.124 -2.357 0.161 O21 O7C 29 O7C H1 H1 H 0 1 N N N N N N 0.739 -0.429 87.938 0.702 -3.034 -1.519 H1 O7C 30 O7C H2 H2 H 0 1 N N N N N N -0.557 -4.953 84.000 -0.774 2.089 0.836 H2 O7C 31 O7C H3 H3 H 0 1 N N N N N N -1.587 -3.678 83.264 -1.158 1.036 2.219 H3 O7C 32 O7C H4 H4 H 0 1 N N N N N N 0.158 -3.776 82.847 0.506 1.621 1.982 H4 O7C 33 O7C H5 H5 H 0 1 N N N N N N -3.241 -0.072 89.057 -1.991 -4.754 -0.677 H5 O7C 34 O7C H6 H6 H 0 1 N N N N N N -1.603 -0.645 89.520 -3.186 -3.955 -1.727 H6 O7C 35 O7C H7 H7 H 0 1 N N N N N N -1.784 0.768 88.427 -1.460 -3.932 -2.164 H7 O7C 36 O7C H8 H8 H 0 1 N N N N N N -2.982 -6.673 88.420 -6.908 1.515 -0.905 H8 O7C 37 O7C H9 H9 H 0 1 N N N N N N -4.022 -8.181 84.304 -3.398 3.930 -1.104 H9 O7C 38 O7C H10 H10 H 0 1 N N N N N N 5.249 -6.489 83.903 6.223 2.003 -1.423 H10 O7C 39 O7C H11 H11 H 0 1 N N N N N N 6.559 -5.263 83.821 5.705 0.496 -2.207 H11 O7C 40 O7C H12 H12 H 0 1 N N N N N N 6.367 -6.436 86.027 7.456 -0.032 -0.608 H12 O7C 41 O7C H13 H13 H 0 1 N N N N N N 6.236 -4.647 86.115 6.597 0.841 0.684 H13 O7C 42 O7C H14 H14 H 0 1 N N N N N N 4.061 -6.734 86.422 5.500 -1.599 -0.798 H14 O7C 43 O7C H15 H15 H 0 1 N N N N N N 4.629 -5.514 87.612 6.239 -1.638 0.825 H15 O7C 44 O7C H16 H16 H 0 1 N N N N N N 2.599 -1.384 86.381 2.482 -1.429 -0.988 H16 O7C 45 O7C H17 H17 H 0 1 N N N N N N -3.321 -3.278 83.876 -2.495 0.619 2.104 H17 O7C 46 O7C H18 H18 H 0 1 N N N N N N -4.716 -2.967 84.965 -3.917 -0.452 2.086 H18 O7C 47 O7C H19 H19 H 0 1 N N N N N N -3.089 -4.225 87.539 -5.736 -0.067 0.574 H19 O7C 48 O7C H20 H20 H 0 1 N N N N N N -3.437 -8.660 86.796 -5.734 3.506 -1.756 H20 O7C 49 O7C H21 H21 H 0 1 N N N N N N -4.146 -5.734 83.420 -2.224 2.346 0.371 H21 O7C 50 O7C H22 H22 H 0 1 N N N N N N 3.999 -3.211 82.455 2.760 2.530 -1.026 H22 O7C 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal O7C O7 C6 SING N N 1 O7C O11 C9 DOUB N N 2 O7C C17 C16 SING N N 3 O7C C6 C1 SING N N 4 O7C C6 C5 DOUB N N 5 O7C C9 C5 SING N N 6 O7C C9 C10 SING N N 7 O7C C1 C2 SING N N 8 O7C C29 C28 DOUB Y N 9 O7C C29 C24 SING Y N 10 O7C C5 C4 SING N N 11 O7C C16 C10 DOUB Y N 12 O7C C16 C15 SING Y N 13 O7C C23 C24 SING N N 14 O7C C23 N20 SING N N 15 O7C C28 C27 SING Y N 16 O7C C10 C12 SING Y N 17 O7C C24 C25 DOUB Y N 18 O7C C15 N20 SING N N 19 O7C C15 C14 DOUB Y N 20 O7C N20 C19 SING N N 21 O7C C2 C3 SING N N 22 O7C C4 C3 SING N N 23 O7C C4 O8 DOUB N N 24 O7C C12 C13 DOUB Y N 25 O7C C27 C26 DOUB Y N 26 O7C C14 C13 SING Y N 27 O7C C14 N18 SING N N 28 O7C C25 C26 SING Y N 29 O7C C19 O21 DOUB N N 30 O7C C19 N18 SING N N 31 O7C N18 C22 SING N N 32 O7C C13 H1 SING N N 33 O7C C17 H2 SING N N 34 O7C C17 H3 SING N N 35 O7C C17 H4 SING N N 36 O7C C22 H5 SING N N 37 O7C C22 H6 SING N N 38 O7C C22 H7 SING N N 39 O7C C26 H8 SING N N 40 O7C C28 H9 SING N N 41 O7C C1 H10 SING N N 42 O7C C1 H11 SING N N 43 O7C C2 H12 SING N N 44 O7C C2 H13 SING N N 45 O7C C3 H14 SING N N 46 O7C C3 H15 SING N N 47 O7C C12 H16 SING N N 48 O7C C23 H17 SING N N 49 O7C C23 H18 SING N N 50 O7C C25 H19 SING N N 51 O7C C27 H20 SING N N 52 O7C C29 H21 SING N N 53 O7C O7 H22 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor O7C InChI InChI 1.06 "InChI=1S/C23H22N2O4/c1-14-16(22(28)20-18(26)9-6-10-19(20)27)11-12-17-21(14)25(23(29)24(17)2)13-15-7-4-3-5-8-15/h3-5,7-8,11-12,26H,6,9-10,13H2,1-2H3" O7C InChIKey InChI 1.06 BLDJZCZVJMSDIC-UHFFFAOYSA-N O7C SMILES_CANONICAL CACTVS 3.385 "CN1C(=O)N(Cc2ccccc2)c3c(C)c(ccc13)C(=O)C4=C(O)CCCC4=O" O7C SMILES CACTVS 3.385 "CN1C(=O)N(Cc2ccccc2)c3c(C)c(ccc13)C(=O)C4=C(O)CCCC4=O" O7C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(ccc2c1N(C(=O)N2C)Cc3ccccc3)C(=O)C4=C(CCCC4=O)O" O7C SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(ccc2c1N(C(=O)N2C)Cc3ccccc3)C(=O)C4=C(CCCC4=O)O" # _pdbx_chem_comp_identifier.comp_id O7C _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "1,4-dimethyl-5-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(phenylmethyl)benzimidazol-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site O7C "Create component" 2023-01-26 PDBJ O7C "Initial release" 2023-12-20 RCSB #