data_O7O # _chem_comp.id O7O _chem_comp.name "2-[4-chloranyl-6-(5,6,7,8-tetrahydronaphthalen-1-ylamino)pyrimidin-2-yl]sulfanylethanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H16 Cl N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-08-30 _chem_comp.pdbx_modified_date 2023-07-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 349.835 _chem_comp.one_letter_code ? _chem_comp.three_letter_code O7O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ATY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal O7O N1 N1 N 0 1 Y N N 2.901 41.652 72.460 0.363 0.084 -0.106 N1 O7O 1 O7O C2 C1 C 0 1 N N N 0.843 40.145 73.833 4.253 -0.825 0.202 C2 O7O 2 O7O C4 C2 C 0 1 Y N N 3.824 42.437 71.904 -0.319 1.221 -0.202 C4 O7O 3 O7O C5 C3 C 0 1 Y N N 5.241 44.441 72.500 -2.380 -0.011 -0.426 C5 O7O 4 O7O C6 C4 C 0 1 Y N N 6.605 44.134 72.536 -3.708 -0.112 -0.010 C6 O7O 5 O7O O1 O1 O 0 1 N N N -1.392 40.867 73.404 6.521 -1.779 0.400 O1 O7O 6 O7O C3 C5 C 0 1 N N N -0.227 41.147 73.492 5.199 -1.992 0.317 C3 O7O 7 O7O O O2 O 0 1 N N N 0.245 42.342 73.241 4.766 -3.121 0.335 O O7O 8 O7O S S1 S 0 1 N N N 1.360 39.446 72.210 2.551 -1.434 0.110 S O7O 9 O7O C1 C6 C 0 1 Y N N 2.512 40.632 71.668 1.685 0.096 -0.015 C1 O7O 10 O7O N N2 N 0 1 Y N N 2.935 40.317 70.442 2.373 1.229 -0.016 N O7O 11 O7O C15 C7 C 0 1 Y N N 4.343 42.231 70.619 0.376 2.431 -0.206 C15 O7O 12 O7O C C8 C 0 1 Y N N 3.822 41.152 69.957 1.756 2.399 -0.109 C O7O 13 O7O CL CL1 CL 0 0 N N N 4.269 40.878 68.297 2.670 3.875 -0.108 CL O7O 14 O7O N2 N3 N 0 1 N N N 4.437 43.381 72.646 -1.702 1.205 -0.298 N2 O7O 15 O7O C14 C9 C 0 1 Y N N 4.786 45.696 72.113 -1.727 -1.111 -0.960 C14 O7O 16 O7O C13 C10 C 0 1 Y N N 5.707 46.672 71.802 -2.397 -2.313 -1.079 C13 O7O 17 O7O C12 C11 C 0 1 Y N N 7.056 46.396 71.857 -3.710 -2.411 -0.669 C12 O7O 18 O7O C11 C12 C 0 1 Y N N 7.522 45.132 72.200 -4.373 -1.309 -0.140 C11 O7O 19 O7O C10 C13 C 0 1 N N N 9.008 44.867 72.218 -5.809 -1.489 0.277 C10 O7O 20 O7O C9 C14 C 0 1 N N N 9.333 43.396 72.017 -6.243 -0.359 1.208 C9 O7O 21 O7O C8 C15 C 0 1 N N N 8.563 42.566 72.991 -5.883 0.977 0.548 C8 O7O 22 O7O C7 C16 C 0 1 N N N 7.061 42.726 72.836 -4.356 1.116 0.575 C7 O7O 23 O7O H1 H1 H 0 1 N N N 0.442 39.356 74.486 4.362 -0.182 1.075 H1 O7O 24 O7O H2 H2 H 0 1 N N N 1.691 40.637 74.332 4.485 -0.257 -0.699 H2 O7O 25 O7O H3 H3 H 0 1 N N N -1.883 41.634 73.132 7.088 -2.559 0.472 H3 O7O 26 O7O H4 H4 H 0 1 N N N 5.095 42.873 70.185 -0.150 3.371 -0.283 H4 O7O 27 O7O H5 H5 H 0 1 N N N 4.223 43.246 73.613 -2.200 2.037 -0.276 H5 O7O 28 O7O H6 H6 H 0 1 N N N 3.727 45.903 72.057 -0.699 -1.028 -1.282 H6 O7O 29 O7O H7 H7 H 0 1 N N N 5.371 47.657 71.514 -1.891 -3.176 -1.488 H7 O7O 30 O7O H8 H8 H 0 1 N N N 7.766 47.178 71.629 -4.231 -3.352 -0.765 H8 O7O 31 O7O H9 H9 H 0 1 N N N 9.413 45.190 73.188 -6.444 -1.489 -0.609 H9 O7O 32 O7O H10 H10 H 0 1 N N N 9.481 45.447 71.412 -5.916 -2.442 0.795 H10 O7O 33 O7O H11 H11 H 0 1 N N N 9.063 43.100 70.993 -7.320 -0.410 1.370 H11 O7O 34 O7O H12 H12 H 0 1 N N N 10.410 43.236 72.173 -5.723 -0.449 2.162 H12 O7O 35 O7O H13 H13 H 0 1 N N N 8.823 41.508 72.835 -6.251 0.990 -0.478 H13 O7O 36 O7O H14 H14 H 0 1 N N N 8.846 42.866 74.011 -6.333 1.797 1.109 H14 O7O 37 O7O H15 H15 H 0 1 N N N 6.583 42.403 73.773 -4.010 1.251 1.600 H15 O7O 38 O7O H16 H16 H 0 1 N N N 6.730 42.076 72.013 -4.073 1.987 -0.017 H16 O7O 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal O7O CL C SING N N 1 O7O C N DOUB Y N 2 O7O C C15 SING Y N 3 O7O N C1 SING Y N 4 O7O C15 C4 DOUB Y N 5 O7O C1 S SING N N 6 O7O C1 N1 DOUB Y N 7 O7O C13 C12 DOUB Y N 8 O7O C13 C14 SING Y N 9 O7O C12 C11 SING Y N 10 O7O C4 N1 SING Y N 11 O7O C4 N2 SING N N 12 O7O C9 C10 SING N N 13 O7O C9 C8 SING N N 14 O7O C14 C5 DOUB Y N 15 O7O C11 C10 SING N N 16 O7O C11 C6 DOUB Y N 17 O7O S C2 SING N N 18 O7O C5 C6 SING Y N 19 O7O C5 N2 SING N N 20 O7O C6 C7 SING N N 21 O7O C7 C8 SING N N 22 O7O O C3 DOUB N N 23 O7O O1 C3 SING N N 24 O7O C3 C2 SING N N 25 O7O C2 H1 SING N N 26 O7O C2 H2 SING N N 27 O7O O1 H3 SING N N 28 O7O C15 H4 SING N N 29 O7O N2 H5 SING N N 30 O7O C14 H6 SING N N 31 O7O C13 H7 SING N N 32 O7O C12 H8 SING N N 33 O7O C10 H9 SING N N 34 O7O C10 H10 SING N N 35 O7O C9 H11 SING N N 36 O7O C9 H12 SING N N 37 O7O C8 H13 SING N N 38 O7O C8 H14 SING N N 39 O7O C7 H15 SING N N 40 O7O C7 H16 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor O7O InChI InChI 1.06 "InChI=1S/C16H16ClN3O2S/c17-13-8-14(20-16(19-13)23-9-15(21)22)18-12-7-3-5-10-4-1-2-6-11(10)12/h3,5,7-8H,1-2,4,6,9H2,(H,21,22)(H,18,19,20)" O7O InChIKey InChI 1.06 BPCUCWYWVVQEIW-UHFFFAOYSA-N O7O SMILES_CANONICAL CACTVS 3.385 "OC(=O)CSc1nc(Cl)cc(Nc2cccc3CCCCc23)n1" O7O SMILES CACTVS 3.385 "OC(=O)CSc1nc(Cl)cc(Nc2cccc3CCCCc23)n1" O7O SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(c(c1)Nc3cc(nc(n3)SCC(=O)O)Cl)CCCC2" O7O SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c(c(c1)Nc3cc(nc(n3)SCC(=O)O)Cl)CCCC2" # _pdbx_chem_comp_identifier.comp_id O7O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "2-[4-chloranyl-6-(5,6,7,8-tetrahydronaphthalen-1-ylamino)pyrimidin-2-yl]sulfanylethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site O7O "Create component" 2022-08-30 PDBE O7O "Initial release" 2023-07-12 RCSB #