data_OG9 # _chem_comp.id OG9 _chem_comp.name "(pyren-1-yl)acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H12 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-04-29 _chem_comp.pdbx_modified_date 2023-11-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 260.287 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OG9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7UUQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OG9 CA C1 C 0 1 N N N N N N -6.964 -0.709 4.084 -3.122 -0.070 -0.878 CA OG9 1 OG9 C C2 C 0 1 N N N Y N Y -8.333 -0.226 4.512 -3.752 -0.517 0.416 C OG9 2 OG9 O O1 O 0 1 N N N Y N Y -8.966 -0.788 5.438 -3.189 -0.310 1.465 O OG9 3 OG9 C05 C3 C 0 1 Y N N N N N -5.989 -1.050 5.196 -1.806 0.604 -0.589 C05 OG9 4 OG9 C06 C4 C 0 1 Y N N N N N -6.044 -2.302 5.822 -1.768 2.066 -0.458 C06 OG9 5 OG9 C07 C5 C 0 1 Y N N N N N -5.128 -2.613 6.829 -0.661 2.731 -0.206 C07 OG9 6 OG9 C08 C6 C 0 1 Y N N N N N -4.143 -1.663 7.210 0.604 1.993 -0.047 C08 OG9 7 OG9 C09 C7 C 0 1 Y N N N N N -3.221 -1.978 8.226 1.745 2.591 0.205 C09 OG9 8 OG9 C10 C8 C 0 1 Y N N N N N -2.267 -1.064 8.598 2.980 1.793 0.353 C10 OG9 9 OG9 C11 C9 C 0 1 Y N N N N N -2.215 0.194 7.957 2.936 0.487 0.235 C11 OG9 10 OG9 C12 C10 C 0 1 Y N N N N N -1.234 1.137 8.335 4.131 -0.364 0.371 C12 OG9 11 OG9 C13 C11 C 0 1 Y N N N N N -1.186 2.383 7.701 4.014 -1.668 0.239 C13 OG9 12 OG9 C14 C12 C 0 1 Y N N N N N -2.096 2.690 6.700 2.731 -2.326 -0.043 C14 OG9 13 OG9 C15 C13 C 0 1 Y N N N N N -3.079 1.741 6.321 1.617 -1.647 -0.181 C15 OG9 14 OG9 C16 C14 C 0 1 Y N N N N N -3.128 0.502 6.953 1.651 -0.179 -0.048 C16 OG9 15 OG9 C17 C15 C 0 1 Y N N N N N -4.089 -0.422 6.580 0.561 0.525 -0.179 C17 OG9 16 OG9 C18 C16 C 0 1 Y N N N N N -5.009 -0.111 5.568 -0.728 -0.133 -0.458 C18 OG9 17 OG9 C19 C17 C 0 1 Y N N N N N -4.964 1.131 4.929 -0.772 -1.600 -0.585 C19 OG9 18 OG9 C20 C18 C 0 1 Y N N N N N -4.006 2.055 5.302 0.333 -2.311 -0.463 C20 OG9 19 OG9 H1 H1 H 0 1 N N N N N N -7.104 -1.613 3.473 -2.954 -0.936 -1.519 H1 OG9 20 OG9 H2 H2 H 0 1 N N N N N N -6.508 0.081 3.470 -3.787 0.632 -1.382 H2 OG9 21 OG9 H4 H4 H 0 1 N N N N N N -6.792 -3.024 5.527 -2.689 2.619 -0.573 H4 OG9 22 OG9 H5 H5 H 0 1 N N N N N N -5.168 -3.575 7.318 -0.679 3.808 -0.118 H5 OG9 23 OG9 H6 H6 H 0 1 N N N N N N -3.264 -2.941 8.714 1.781 3.666 0.303 H6 OG9 24 OG9 H7 H7 H 0 1 N N N N N N -1.559 -1.305 9.377 3.919 2.285 0.560 H7 OG9 25 OG9 H8 H8 H 0 1 N N N N N N -0.523 0.897 9.111 5.095 0.078 0.577 H8 OG9 26 OG9 H9 H9 H 0 1 N N N N N N -0.439 3.107 7.991 4.897 -2.280 0.341 H9 OG9 27 OG9 H10 H10 H 0 1 N N N N N N -2.056 3.651 6.210 2.705 -3.401 -0.140 H10 OG9 28 OG9 H11 H11 H 0 1 N N N N N N -5.673 1.367 4.149 -1.709 -2.094 -0.792 H11 OG9 29 OG9 H12 H12 H 0 1 N N N N N N -3.966 3.018 4.814 0.294 -3.386 -0.558 H12 OG9 30 OG9 O1 O2 O 0 1 N Y N Y N Y -8.796 0.810 3.826 -4.938 -1.146 0.403 O1 OG9 31 OG9 H3 H3 H 0 1 N Y N Y N Y -9.659 1.043 4.147 -5.302 -1.414 1.258 H3 OG9 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OG9 CA C SING N N 1 OG9 CA C05 SING N N 2 OG9 C O DOUB N N 3 OG9 C19 C20 DOUB Y N 4 OG9 C19 C18 SING Y N 5 OG9 C05 C18 DOUB Y N 6 OG9 C05 C06 SING Y N 7 OG9 C20 C15 SING Y N 8 OG9 C18 C17 SING Y N 9 OG9 C06 C07 DOUB Y N 10 OG9 C15 C14 DOUB Y N 11 OG9 C15 C16 SING Y N 12 OG9 C17 C16 DOUB Y N 13 OG9 C17 C08 SING Y N 14 OG9 C14 C13 SING Y N 15 OG9 C07 C08 SING Y N 16 OG9 C16 C11 SING Y N 17 OG9 C08 C09 DOUB Y N 18 OG9 C13 C12 DOUB Y N 19 OG9 C11 C12 SING Y N 20 OG9 C11 C10 DOUB Y N 21 OG9 C09 C10 SING Y N 22 OG9 CA H1 SING N N 23 OG9 CA H2 SING N N 24 OG9 C06 H4 SING N N 25 OG9 C07 H5 SING N N 26 OG9 C09 H6 SING N N 27 OG9 C10 H7 SING N N 28 OG9 C12 H8 SING N N 29 OG9 C13 H9 SING N N 30 OG9 C14 H10 SING N N 31 OG9 C19 H11 SING N N 32 OG9 C20 H12 SING N N 33 OG9 C O1 SING N N 34 OG9 O1 H3 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OG9 SMILES ACDLabs 12.01 "O=C(O)Cc1ccc2ccc3cccc4ccc1c2c34" OG9 InChI InChI 1.03 "InChI=1S/C18H12O2/c19-16(20)10-14-7-6-13-5-4-11-2-1-3-12-8-9-15(14)18(13)17(11)12/h1-9H,10H2,(H,19,20)" OG9 InChIKey InChI 1.03 SDJCLYBBPUHKCD-UHFFFAOYSA-N OG9 SMILES_CANONICAL CACTVS 3.385 "OC(=O)Cc1ccc2ccc3cccc4ccc1c2c34" OG9 SMILES CACTVS 3.385 "OC(=O)Cc1ccc2ccc3cccc4ccc1c2c34" OG9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2ccc3ccc(c4c3c2c(c1)cc4)CC(=O)O" OG9 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2ccc3ccc(c4c3c2c(c1)cc4)CC(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OG9 "SYSTEMATIC NAME" ACDLabs 12.01 "(pyren-1-yl)acetic acid" OG9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-pyren-1-ylethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OG9 "Create component" 2022-04-29 RCSB OG9 "Initial release" 2023-05-10 RCSB OG9 "Modify backbone" 2023-11-03 PDBE #