data_OGM # _chem_comp.id OGM _chem_comp.name "methyl {4-[5-(hydroxymethyl)-1H-imidazol-2-yl]butyl}carbamate" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H17 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-06-24 _chem_comp.pdbx_modified_date 2019-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 227.260 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OGM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6PGA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OGM C01 C1 C 0 1 N N N 3.289 76.582 6.580 -7.213 0.444 0.237 C01 OGM 1 OGM O02 O1 O 0 1 N N N 4.013 76.096 5.484 -6.042 -0.400 0.079 O02 OGM 2 OGM C03 C2 C 0 1 N N N 4.827 74.969 5.773 -4.842 0.210 0.105 C03 OGM 3 OGM N04 N1 N 0 1 N N N 5.942 74.667 4.893 -3.714 -0.515 -0.036 N04 OGM 4 OGM C05 C3 C 0 1 N N N 6.709 73.460 5.038 -2.408 0.149 -0.008 C05 OGM 5 OGM C06 C4 C 0 1 N N N 6.493 72.575 3.823 -1.303 -0.894 -0.188 C06 OGM 6 OGM C07 C5 C 0 1 N N N 5.081 71.991 3.747 0.061 -0.201 -0.159 C07 OGM 7 OGM C08 C6 C 0 1 N N N 4.823 70.892 4.780 1.166 -1.243 -0.339 C08 OGM 8 OGM C09 C7 C 0 1 Y N N 3.465 70.225 4.623 2.510 -0.561 -0.310 C09 OGM 9 OGM N10 N2 N 0 1 Y N N 2.676 69.809 5.632 3.534 -0.873 0.513 N10 OGM 10 OGM C11 C8 C 0 1 Y N N 1.574 69.298 5.123 4.564 -0.022 0.219 C11 OGM 11 OGM C12 C9 C 0 1 N N N 0.439 68.714 5.939 5.919 0.011 0.877 C12 OGM 12 OGM O13 O2 O 0 1 N N N -0.638 68.343 5.101 6.712 1.043 0.287 O13 OGM 13 OGM C14 C10 C 0 1 Y N N 1.671 69.383 3.767 4.135 0.781 -0.774 C14 OGM 14 OGM N15 N3 N 0 1 Y N N 2.818 69.942 3.484 2.878 0.426 -1.080 N15 OGM 15 OGM O16 O3 O 0 1 N N N 4.601 74.278 6.707 -4.775 1.414 0.255 O16 OGM 16 OGM H1 H1 H 0 1 N N N 2.689 77.450 6.268 -8.112 -0.171 0.197 H1 OGM 17 OGM H2 H2 H 0 1 N N N 2.623 75.793 6.958 -7.165 0.956 1.198 H2 OGM 18 OGM H3 H3 H 0 1 N N N 3.986 76.885 7.375 -7.241 1.180 -0.567 H3 OGM 19 OGM H4 H4 H 0 1 N N N 6.182 75.314 4.169 -3.767 -1.476 -0.156 H4 OGM 20 OGM H5 H5 H 0 1 N N N 6.385 72.926 5.943 -2.354 0.879 -0.815 H5 OGM 21 OGM H6 H6 H 0 1 N N N 7.776 73.712 5.123 -2.278 0.654 0.949 H6 OGM 22 OGM H7 H7 H 0 1 N N N 7.213 71.745 3.863 -1.357 -1.624 0.619 H7 OGM 23 OGM H8 H8 H 0 1 N N N 6.673 73.174 2.918 -1.433 -1.400 -1.145 H8 OGM 24 OGM H9 H9 H 0 1 N N N 4.358 72.803 3.914 0.115 0.529 -0.966 H9 OGM 25 OGM H10 H10 H 0 1 N N N 4.932 71.568 2.743 0.191 0.305 0.798 H10 OGM 26 OGM H11 H11 H 0 1 N N N 5.603 70.124 4.675 1.112 -1.973 0.468 H11 OGM 27 OGM H12 H12 H 0 1 N N N 4.879 71.337 5.784 1.036 -1.749 -1.296 H12 OGM 28 OGM H13 H13 H 0 1 N N N 2.891 69.877 6.606 3.538 -1.570 1.187 H13 OGM 29 OGM H14 H14 H 0 1 N N N 0.091 69.465 6.663 5.801 0.208 1.943 H14 OGM 30 OGM H15 H15 H 0 1 N N N 0.801 67.825 6.477 6.414 -0.951 0.739 H15 OGM 31 OGM H16 H16 H 0 1 N N N -1.340 67.979 5.628 7.599 1.122 0.664 H16 OGM 32 OGM H17 H17 H 0 1 N N N 0.932 69.048 3.054 4.704 1.570 -1.243 H17 OGM 33 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OGM N15 C14 SING Y N 1 OGM N15 C09 DOUB Y N 2 OGM C07 C06 SING N N 3 OGM C07 C08 SING N N 4 OGM C14 C11 DOUB Y N 5 OGM C06 C05 SING N N 6 OGM C09 C08 SING N N 7 OGM C09 N10 SING Y N 8 OGM N04 C05 SING N N 9 OGM N04 C03 SING N N 10 OGM O13 C12 SING N N 11 OGM C11 N10 SING Y N 12 OGM C11 C12 SING N N 13 OGM O02 C03 SING N N 14 OGM O02 C01 SING N N 15 OGM C03 O16 DOUB N N 16 OGM C01 H1 SING N N 17 OGM C01 H2 SING N N 18 OGM C01 H3 SING N N 19 OGM N04 H4 SING N N 20 OGM C05 H5 SING N N 21 OGM C05 H6 SING N N 22 OGM C06 H7 SING N N 23 OGM C06 H8 SING N N 24 OGM C07 H9 SING N N 25 OGM C07 H10 SING N N 26 OGM C08 H11 SING N N 27 OGM C08 H12 SING N N 28 OGM N10 H13 SING N N 29 OGM C12 H14 SING N N 30 OGM C12 H15 SING N N 31 OGM O13 H16 SING N N 32 OGM C14 H17 SING N N 33 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OGM SMILES ACDLabs 12.01 "COC(=O)NCCCCc1nc(CO)cn1" OGM InChI InChI 1.03 "InChI=1S/C10H17N3O3/c1-16-10(15)11-5-3-2-4-9-12-6-8(7-14)13-9/h6,14H,2-5,7H2,1H3,(H,11,15)(H,12,13)" OGM InChIKey InChI 1.03 FLDJBEVUBLZUEF-UHFFFAOYSA-N OGM SMILES_CANONICAL CACTVS 3.385 "COC(=O)NCCCCc1[nH]c(CO)cn1" OGM SMILES CACTVS 3.385 "COC(=O)NCCCCc1[nH]c(CO)cn1" OGM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COC(=O)NCCCCc1[nH]c(cn1)CO" OGM SMILES "OpenEye OEToolkits" 2.0.7 "COC(=O)NCCCCc1[nH]c(cn1)CO" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OGM "SYSTEMATIC NAME" ACDLabs 12.01 "methyl {4-[5-(hydroxymethyl)-1H-imidazol-2-yl]butyl}carbamate" OGM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "methyl ~{N}-[4-[5-(hydroxymethyl)-1~{H}-imidazol-2-yl]butyl]carbamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OGM "Create component" 2019-06-24 RCSB OGM "Initial release" 2019-12-11 RCSB ##