data_OJI # _chem_comp.id OJI _chem_comp.name "(2R,3R,4S,5R)-2-(2-azanylpurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C10 H13 N5 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-07 _chem_comp.pdbx_modified_date 2023-03-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.241 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OJI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8I7N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OJI N1 N1 N 0 1 Y N N 106.297 83.431 94.160 -0.356 -0.729 -0.031 N1 OJI 1 OJI C2 C1 C 0 1 N N R 106.757 84.765 93.713 0.809 0.095 -0.362 C2 OJI 2 OJI C3 C2 C 0 1 N N S 108.280 86.257 94.932 2.730 1.217 0.562 C3 OJI 3 OJI C4 C3 C 0 1 N N R 108.688 86.033 93.726 3.124 0.097 -0.420 C4 OJI 4 OJI C5 C4 C 0 1 N N N 110.199 85.939 93.662 4.270 -0.730 0.166 C5 OJI 5 OJI C6 C5 C 0 1 Y N N 105.409 82.657 93.486 -1.670 -0.343 -0.101 C6 OJI 6 OJI O2 O1 O 0 1 N N N 106.146 86.959 94.585 0.500 2.182 0.893 O2 OJI 7 OJI N2 N2 N 0 1 Y N N 106.059 81.617 95.299 -1.544 -2.449 0.601 N2 OJI 8 OJI N3 N3 N 0 1 Y N N 104.712 82.812 92.330 -2.302 0.772 -0.444 N3 OJI 9 OJI O4 O2 O 0 1 N N N 110.537 85.661 92.334 4.706 -1.691 -0.797 O4 OJI 10 OJI N4 N4 N 0 1 Y N N 103.717 80.739 92.583 -4.367 -0.201 -0.028 N4 OJI 11 OJI C7 C6 C 0 1 Y N N 106.683 82.785 95.249 -0.332 -2.023 0.400 C7 OJI 12 OJI C8 C7 C 0 1 Y N N 105.250 81.503 94.210 -2.425 -1.461 0.305 C8 OJI 13 OJI C1 C8 C 0 1 N N R 106.824 85.803 94.863 1.233 0.956 0.855 C1 OJI 14 OJI C10 C9 C 0 1 Y N N 103.893 81.868 91.908 -3.623 0.832 -0.405 C10 OJI 15 OJI C9 C10 C 0 1 Y N N 104.360 80.514 93.720 -3.816 -1.349 0.328 C9 OJI 16 OJI N5 N5 N 0 1 N N N 103.157 82.066 90.676 -4.251 2.012 -0.770 N5 OJI 17 OJI O1 O3 O 0 1 N N N 107.983 84.654 93.283 1.965 -0.733 -0.608 O1 OJI 18 OJI O3 O4 O 0 1 N N N 108.259 87.736 95.163 2.905 2.499 -0.046 O3 OJI 19 OJI H1 H1 H 0 1 N N N 106.077 85.146 92.937 0.597 0.728 -1.224 H1 OJI 20 OJI H2 H2 H 0 1 N N N 108.829 85.727 95.724 3.319 1.146 1.477 H2 OJI 21 OJI H3 H3 H 0 1 N N N 108.355 86.814 93.027 3.429 0.529 -1.373 H3 OJI 22 OJI H4 H4 H 0 1 N N N 110.555 85.132 94.319 5.100 -0.071 0.422 H4 OJI 23 OJI H5 H5 H 0 1 N N N 110.650 86.892 93.975 3.925 -1.245 1.063 H5 OJI 24 OJI H6 H6 H 0 1 N N N 106.221 87.555 95.321 0.730 2.755 1.637 H6 OJI 25 OJI H7 H7 H 0 1 N N N 111.481 85.595 92.254 5.433 -2.252 -0.493 H7 OJI 26 OJI H8 H8 H 0 1 N N N 107.391 83.150 95.978 0.563 -2.609 0.550 H8 OJI 27 OJI H9 H9 H 0 1 N N N 106.517 85.340 95.813 1.109 0.402 1.785 H9 OJI 28 OJI H10 H10 H 0 1 N N N 104.209 79.593 94.264 -4.431 -2.182 0.634 H10 OJI 29 OJI H11 H11 H 0 1 N N N 103.390 82.958 90.288 -3.723 2.776 -1.048 H11 OJI 30 OJI H12 H12 H 0 1 N N N 103.397 81.346 90.025 -5.219 2.073 -0.747 H12 OJI 31 OJI H13 H13 H 0 1 N N N 107.961 87.915 96.047 3.822 2.702 -0.279 H13 OJI 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OJI N5 C10 SING N N 1 OJI C10 N3 DOUB Y N 2 OJI C10 N4 SING Y N 3 OJI N3 C6 SING Y N 4 OJI O4 C5 SING N N 5 OJI N4 C9 DOUB Y N 6 OJI O1 C2 SING N N 7 OJI O1 C4 SING N N 8 OJI C6 N1 SING Y N 9 OJI C6 C8 DOUB Y N 10 OJI C5 C4 SING N N 11 OJI C2 N1 SING N N 12 OJI C2 C1 SING N N 13 OJI C9 C8 SING Y N 14 OJI C4 C3 SING N N 15 OJI N1 C7 SING Y N 16 OJI C8 N2 SING Y N 17 OJI O2 C1 SING N N 18 OJI C1 C3 SING N N 19 OJI C3 O3 SING N N 20 OJI C7 N2 DOUB Y N 21 OJI C2 H1 SING N N 22 OJI C3 H2 SING N N 23 OJI C4 H3 SING N N 24 OJI C5 H4 SING N N 25 OJI C5 H5 SING N N 26 OJI O2 H6 SING N N 27 OJI O4 H7 SING N N 28 OJI C7 H8 SING N N 29 OJI C1 H9 SING N N 30 OJI C9 H10 SING N N 31 OJI N5 H11 SING N N 32 OJI N5 H12 SING N N 33 OJI O3 H13 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OJI InChI InChI 1.06 "InChI=1S/C10H13N5O4/c11-10-12-1-4-8(14-10)15(3-13-4)9-7(18)6(17)5(2-16)19-9/h1,3,5-7,9,16-18H,2H2,(H2,11,12,14)/t5-,6-,7-,9-/m1/s1" OJI InChIKey InChI 1.06 JVOJULURLCZUDE-JXOAFFINSA-N OJI SMILES_CANONICAL CACTVS 3.385 "Nc1ncc2ncn([C@@H]3O[C@H](CO)[C@@H](O)[C@H]3O)c2n1" OJI SMILES CACTVS 3.385 "Nc1ncc2ncn([CH]3O[CH](CO)[CH](O)[CH]3O)c2n1" OJI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c2c(nc(n1)N)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO)O)O" OJI SMILES "OpenEye OEToolkits" 2.0.7 "c1c2c(nc(n1)N)n(cn2)C3C(C(C(O3)CO)O)O" # _pdbx_chem_comp_identifier.comp_id OJI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{R},3~{R},4~{S},5~{R})-2-(2-azanylpurin-9-yl)-5-(hydroxymethyl)oxolane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OJI "Create component" 2023-02-07 PDBJ OJI "Initial release" 2023-03-29 RCSB #