data_OK4 # _chem_comp.id OK4 _chem_comp.name "N-acetyl-L-alanyl-5-[5-(hydroxymethyl)-1H-imidazol-2-yl]-L-norvalyl-L-valinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type ATOMP _chem_comp.formula "C19 H32 N6 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-06-26 _chem_comp.pdbx_modified_date 2019-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 424.495 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OK4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6PGD _chem_comp.pdbx_subcomponent_list "ACT ALA OJY VAL NH2" _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OK4 C25 C17 C 0 1 N N N -0.068 -10.624 0.107 -0.338 5.852 0.227 C ACT 1 OK4 O26 O4 O 0 1 N N N 0.608 -10.683 -0.890 -1.231 5.920 -0.591 O ACT 2 OK4 C27 C18 C 0 1 N N N 0.345 -9.881 1.361 -0.041 7.030 1.118 CH3 ACT 3 OK4 N24 N5 N 0 1 N N N -1.346 -11.231 0.110 0.384 4.720 0.342 N ALA 4 OK4 C22 C15 C 0 1 N N S -1.830 -12.020 -1.023 0.091 3.572 -0.520 CA ALA 5 OK4 C20 C14 C 0 1 N N N -1.756 -11.350 -2.384 0.548 2.306 0.157 C ALA 6 OK4 O21 O3 O 0 1 N N N -1.663 -11.980 -3.420 1.067 2.356 1.252 O ALA 7 OK4 C23 C16 C 0 1 N N N -3.250 -12.402 -0.695 0.829 3.734 -1.851 CB ALA 8 OK4 C11 C1 C 0 1 N N N -1.921 -5.547 -4.646 -2.266 -2.316 -0.464 C11 OJY 9 OK4 C14 C2 C 0 1 Y N N -5.298 -4.227 -5.124 -5.891 -1.981 -0.164 C14 OJY 10 OK4 C10 C3 C 0 1 N N N -1.784 -7.050 -4.888 -1.455 -1.132 0.069 C10 OJY 11 OK4 C12 C4 C 0 1 Y N N -3.348 -5.000 -4.550 -3.711 -2.152 -0.071 C12 OJY 12 OK4 C17 C5 C 0 1 N N N -6.454 -3.741 -5.985 -7.309 -1.918 -0.670 C17 OJY 13 OK4 C15 C6 C 0 1 Y N N -5.178 -4.185 -3.732 -5.492 -1.881 1.118 C15 OJY 14 OK4 C06 C11 C 0 1 N N N -0.511 -9.614 -4.506 2.286 -0.338 -0.083 C06 OJY 15 OK4 O07 O1 O 0 1 N N N -0.533 -9.620 -5.718 2.897 0.453 -0.769 O07 OJY 16 OK4 C08 C12 C 0 1 N N S -1.819 -9.334 -3.766 0.823 -0.115 0.203 C08 OJY 17 OK4 C09 C13 C 0 1 N N N -2.003 -7.816 -3.587 0.012 -1.298 -0.330 C09 OJY 18 OK4 N13 N2 N 0 1 Y N N -4.137 -4.752 -5.586 -4.763 -2.157 -0.918 N13 OJY 19 OK4 N16 N3 N 0 1 Y N N -3.959 -4.647 -3.411 -4.155 -1.987 1.145 N16 OJY 20 OK4 O18 O2 O 0 1 N N N -7.552 -3.346 -5.192 -8.200 -1.725 0.430 O18 OJY 21 OK4 N19 N4 N 0 1 N N N -1.840 -9.932 -2.435 0.379 1.117 -0.455 N19 OJY 22 OK4 N05 N1 N 0 1 N N N 0.700 -9.855 -3.765 2.914 -1.418 0.424 N VAL 23 OK4 C04 C10 C 0 1 N N S 1.979 -10.059 -4.471 4.336 -1.635 0.146 CA VAL 24 OK4 C28 C19 C 0 1 N N N 2.163 -11.493 -4.909 4.487 -2.346 -1.174 C VAL 25 OK4 O29 O5 O 0 1 N N N 3.139 -11.802 -5.545 3.566 -2.997 -1.621 O VAL 26 OK4 C02 C8 C 0 1 N N N 3.187 -9.629 -3.648 4.948 -2.489 1.258 CB VAL 27 OK4 C01 C7 C 0 1 N N N 3.017 -8.185 -3.155 4.862 -1.734 2.586 CG1 VAL 28 OK4 C03 C9 C 0 1 N N N 3.577 -10.606 -2.522 4.181 -3.808 1.370 CG2 VAL 29 OK4 N30 N6 N 0 1 N N N 1.164 -12.447 -4.584 5.645 -2.259 -1.858 N NH2 30 OK4 H29 H29 H 0 1 N N N 1.333 -9.422 1.207 -0.634 6.955 2.030 H1 ACT 31 OK4 H30 H30 H 0 1 N N N -0.393 -9.096 1.582 1.019 7.033 1.374 H2 ACT 32 OK4 H31 H31 H 0 1 N N N 0.395 -10.585 2.205 -0.292 7.953 0.596 H3 ACT 33 OK4 H28 H28 H 0 1 N N N -1.936 -11.117 0.910 1.099 4.665 0.996 H ALA 34 OK4 H24 H24 H 0 1 N N N -1.238 -12.946 -1.076 -0.982 3.520 -0.703 HA ALA 35 OK4 H25 H25 H 0 1 N N N -3.282 -12.885 0.293 0.498 4.650 -2.341 HB1 ALA 36 OK4 H26 H26 H 0 1 N N N -3.879 -11.499 -0.682 1.902 3.786 -1.668 HB2 ALA 37 OK4 H27 H27 H 0 1 N N N -3.627 -13.101 -1.457 0.610 2.880 -2.493 HB3 ALA 38 OK4 H1 H1 H 0 1 N N N -1.419 -5.027 -5.475 -2.186 -2.350 -1.550 H1 OJY 39 OK4 H2 H2 H 0 1 N N N -1.408 -5.312 -3.702 -1.877 -3.242 -0.041 H2 OJY 40 OK4 H3 H3 H 0 1 N N N -2.533 -7.369 -5.628 -1.844 -0.206 -0.354 H3 OJY 41 OK4 H4 H4 H 0 1 N N N -0.776 -7.266 -5.271 -1.535 -1.097 1.156 H4 OJY 42 OK4 H5 H5 H 0 1 N N N -6.118 -2.883 -6.585 -7.409 -1.088 -1.369 H5 OJY 43 OK4 H6 H6 H 0 1 N N N -6.770 -4.555 -6.654 -7.556 -2.851 -1.177 H6 OJY 44 OK4 H7 H7 H 0 1 N N N -5.931 -3.842 -3.038 -6.135 -1.740 1.974 H7 OJY 45 OK4 H17 H17 H 0 1 N N N -2.657 -9.724 -4.363 0.672 -0.026 1.279 H17 OJY 46 OK4 H18 H18 H 0 1 N N N -1.280 -7.458 -2.839 0.401 -2.225 0.093 H18 OJY 47 OK4 H19 H19 H 0 1 N N N -3.026 -7.623 -3.230 0.092 -1.333 -1.416 H19 OJY 48 OK4 H20 H20 H 0 1 N N N -3.914 -4.923 -6.546 -4.725 -2.265 -1.881 H20 OJY 49 OK4 H22 H22 H 0 1 N N N -8.258 -3.048 -5.754 -9.132 -1.675 0.178 H22 OJY 50 OK4 H23 H23 H 0 1 N N N -1.909 -9.376 -1.607 -0.036 1.076 -1.331 H23 OJY 51 OK4 H16 H16 H 0 1 N N N 0.674 -9.884 -2.766 2.425 -2.051 0.972 H VAL 52 OK4 H15 H15 H 0 1 N N N 1.965 -9.438 -5.378 4.848 -0.674 0.101 HA VAL 53 OK4 H11 H11 H 0 1 N N N 4.040 -9.613 -4.343 5.993 -2.695 1.024 HB VAL 54 OK4 H10 H10 H 0 1 N N N 2.115 -8.115 -2.529 5.329 -0.755 2.479 HG11 VAL 55 OK4 H8 H8 H 0 1 N N N 3.897 -7.893 -2.564 3.815 -1.609 2.865 HG12 VAL 56 OK4 H9 H9 H 0 1 N N N 2.916 -7.512 -4.019 5.379 -2.301 3.360 HG13 VAL 57 OK4 H12 H12 H 0 1 N N N 3.684 -11.620 -2.936 4.617 -4.416 2.162 HG21 VAL 58 OK4 H13 H13 H 0 1 N N N 4.532 -10.290 -2.077 3.136 -3.602 1.603 HG22 VAL 59 OK4 H14 H14 H 0 1 N N N 2.794 -10.606 -1.749 4.242 -4.345 0.423 HG23 VAL 60 OK4 H32 H32 H 0 1 N N N 1.262 -13.396 -4.884 6.405 -1.799 -1.468 HN2 NH2 61 OK4 H33 H33 H 0 1 N N N 0.362 -12.170 -4.055 5.718 -2.656 -2.740 H33 NH2 62 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OK4 C11 C12 SING N N 1 OK4 C11 C10 SING N N 2 OK4 C14 C17 SING N N 3 OK4 C14 N13 SING Y N 4 OK4 C14 C15 DOUB Y N 5 OK4 C10 C09 SING N N 6 OK4 C12 N13 SING Y N 7 OK4 C12 N16 DOUB Y N 8 OK4 C17 O18 SING N N 9 OK4 C15 N16 SING Y N 10 OK4 C01 C02 SING N N 11 OK4 C02 C04 SING N N 12 OK4 C02 C03 SING N N 13 OK4 C04 C28 SING N N 14 OK4 C04 N05 SING N N 15 OK4 N05 C06 SING N N 16 OK4 C06 O07 DOUB N N 17 OK4 C06 C08 SING N N 18 OK4 C08 N19 SING N N 19 OK4 C08 C09 SING N N 20 OK4 N19 C20 SING N N 21 OK4 C20 O21 DOUB N N 22 OK4 C20 C22 SING N N 23 OK4 C22 C23 SING N N 24 OK4 C22 N24 SING N N 25 OK4 N24 C25 SING N N 26 OK4 C25 O26 DOUB N N 27 OK4 C25 C27 SING N N 28 OK4 C28 N30 SING N N 29 OK4 C28 O29 DOUB N N 30 OK4 C11 H1 SING N N 31 OK4 C11 H2 SING N N 32 OK4 C10 H3 SING N N 33 OK4 C10 H4 SING N N 34 OK4 C17 H5 SING N N 35 OK4 C17 H6 SING N N 36 OK4 C15 H7 SING N N 37 OK4 C01 H8 SING N N 38 OK4 C01 H9 SING N N 39 OK4 C01 H10 SING N N 40 OK4 C02 H11 SING N N 41 OK4 C03 H12 SING N N 42 OK4 C03 H13 SING N N 43 OK4 C03 H14 SING N N 44 OK4 C04 H15 SING N N 45 OK4 N05 H16 SING N N 46 OK4 C08 H17 SING N N 47 OK4 C09 H18 SING N N 48 OK4 C09 H19 SING N N 49 OK4 N13 H20 SING N N 50 OK4 O18 H22 SING N N 51 OK4 N19 H23 SING N N 52 OK4 C22 H24 SING N N 53 OK4 C23 H25 SING N N 54 OK4 C23 H26 SING N N 55 OK4 C23 H27 SING N N 56 OK4 N24 H28 SING N N 57 OK4 C27 H29 SING N N 58 OK4 C27 H30 SING N N 59 OK4 C27 H31 SING N N 60 OK4 N30 H32 SING N N 61 OK4 N30 H33 SING N N 62 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OK4 SMILES ACDLabs 12.01 "C(=O)(C)NC(C)C(=O)NC(C(=O)NC(C(N)=O)C(C)C)CCCc1nc(CO)cn1" OK4 InChI InChI 1.03 "InChI=1S/C19H32N6O5/c1-10(2)16(17(20)28)25-19(30)14(24-18(29)11(3)22-12(4)27)6-5-7-15-21-8-13(9-26)23-15/h8,10-11,14,16,26H,5-7,9H2,1-4H3,(H2,20,28)(H,21,23)(H,22,27)(H,24,29)(H,25,30)/t11-,14-,16-/m0/s1" OK4 InChIKey InChI 1.03 QZMKEXBPFOEOMP-PJODQICGSA-N OK4 SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](NC(=O)[C@H](CCCc1[nH]c(CO)cn1)NC(=O)[C@H](C)NC(C)=O)C(N)=O" OK4 SMILES CACTVS 3.385 "CC(C)[CH](NC(=O)[CH](CCCc1[nH]c(CO)cn1)NC(=O)[CH](C)NC(C)=O)C(N)=O" OK4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](C(=O)N[C@@H](CCCc1[nH]c(cn1)CO)C(=O)N[C@@H](C(C)C)C(=O)N)NC(=O)C" OK4 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(C(=O)N)NC(=O)C(CCCc1[nH]c(cn1)CO)NC(=O)C(C)NC(=O)C" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OK4 "SYSTEMATIC NAME" ACDLabs 12.01 "N-acetyl-L-alanyl-5-[5-(hydroxymethyl)-1H-imidazol-2-yl]-L-norvalyl-L-valinamide" OK4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(2~{S})-2-acetamidopropanoyl]amino]-~{N}-[(2~{S})-1-azanyl-3-methyl-1-oxidanylidene-butan-2-yl]-5-[5-(hydroxymethyl)-1~{H}-imidazol-2-yl]pentanamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OK4 "Create component" 2019-06-26 RCSB OK4 "Initial release" 2019-12-11 RCSB ##