data_OLS # _chem_comp.id OLS _chem_comp.name "N-biotin-C-Co4(mu3-O)4(Py)4(H2O)4-beta-alanine" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H41 Co4 N7 O12 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-09-20 _chem_comp.pdbx_modified_date 2018-02-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 995.516 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OLS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag Y _chem_comp.pdbx_model_coordinates_db_code 6AUC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OLS O04 O1 O 0 1 N N N -14.467 0.596 -8.167 ? ? ? O04 OLS 1 OLS C13 C1 C 0 1 N N N -13.242 0.535 -8.443 ? ? ? C13 OLS 2 OLS N03 N1 N 0 1 N N N -12.343 0.675 -7.515 ? ? ? N03 OLS 3 OLS C11 C2 C 0 1 N N R -11.016 0.598 -8.097 ? ? ? C11 OLS 4 OLS C10 C3 C 0 1 N N N -10.239 -0.689 -7.596 ? ? ? C10 OLS 5 OLS S01 S1 S 0 1 N N N -10.827 -2.070 -8.554 ? ? ? S01 OLS 6 OLS N02 N2 N 0 1 N N N -12.768 0.317 -9.627 ? ? ? N02 OLS 7 OLS C12 C4 C 0 1 N N S -11.308 0.258 -9.630 ? ? ? C12 OLS 8 OLS C09 C5 C 0 1 N N S -10.729 -1.097 -10.015 ? ? ? C09 OLS 9 OLS C08 C6 C 0 1 N N N -11.359 -1.638 -11.314 ? ? ? C08 OLS 10 OLS C07 C7 C 0 1 N N N -10.525 -2.792 -11.831 ? ? ? C07 OLS 11 OLS C06 C8 C 0 1 N N N -11.165 -3.400 -13.094 ? ? ? C06 OLS 12 OLS C05 C9 C 0 1 N N N -10.347 -4.564 -13.682 ? ? ? C05 OLS 13 OLS C01 C10 C 0 1 N N N -9.035 -4.055 -14.255 ? ? ? C01 OLS 14 OLS O01 O2 O 0 1 N N N -9.017 -2.968 -14.926 ? ? ? O01 OLS 15 OLS N01 N3 N 0 1 N N N -7.985 -4.828 -14.006 ? ? ? N01 OLS 16 OLS C02 C11 C 0 1 N N N -6.674 -4.422 -14.465 ? ? ? C02 OLS 17 OLS C37 C12 C 0 1 N N N -6.517 -4.971 -15.846 ? ? ? C37 OLS 18 OLS C04 C13 C 0 1 N N N -5.396 -4.273 -16.479 ? ? ? C04 OLS 19 OLS O14 O3 O 0 1 N N N -5.317 -4.632 -17.728 ? ? ? O14 OLS 20 OLS O03 O4 O 0 1 N N N -4.755 -3.317 -15.786 ? ? ? O03 OLS 21 OLS CO4 CO1 CO 0 0 N N N -3.308 -2.246 -16.645 ? ? ? CO4 OLS 22 OLS O05 O5 O 0 1 N N N -2.497 -3.825 -17.179 ? ? ? O05 OLS 23 OLS O07 O6 O 0 1 N N N -1.738 -1.274 -17.742 ? ? ? O07 OLS 24 OLS N07 N4 N 0 1 Y N N -1.989 -2.399 -14.808 ? ? ? N07 OLS 25 OLS C44 C14 C 0 1 Y N N -2.140 -3.646 -14.343 ? ? ? C44 OLS 26 OLS C43 C15 C 0 1 Y N N -1.339 -4.019 -13.236 ? ? ? C43 OLS 27 OLS C42 C16 C 0 1 Y N N -0.438 -3.133 -12.619 ? ? ? C42 OLS 28 OLS C41 C17 C 0 1 Y N N -0.386 -1.912 -13.196 ? ? ? C41 OLS 29 OLS C40 C18 C 0 1 Y N N -1.085 -1.490 -14.261 ? ? ? C40 OLS 30 OLS CO1 CO2 CO 0 0 N N N -1.215 -2.907 -18.576 ? ? ? CO1 OLS 31 OLS N04 N5 N 0 1 Y N N 0.469 -3.414 -17.007 ? ? ? N04 OLS 32 OLS C22 C19 C 0 1 Y N N 1.136 -2.238 -16.760 ? ? ? C22 OLS 33 OLS C21 C20 C 0 1 Y N N 2.203 -2.336 -15.850 ? ? ? C21 OLS 34 OLS C20 C21 C 0 1 Y N N 2.532 -3.610 -15.314 ? ? ? C20 OLS 35 OLS C19 C22 C 0 1 Y N N 1.869 -4.698 -15.632 ? ? ? C19 OLS 36 OLS C18 C23 C 0 1 Y N N 0.869 -4.624 -16.475 ? ? ? C18 OLS 37 OLS O12 O7 O 0 1 N N N -4.371 -2.133 -18.374 ? ? ? O12 OLS 38 OLS CO3 CO3 CO 0 0 N N N -3.136 -0.812 -19.064 ? ? ? CO3 OLS 39 OLS N06 N6 N 0 1 Y N N -4.655 -0.328 -20.569 ? ? ? N06 OLS 40 OLS C34 C24 C 0 1 Y N N -4.318 -0.601 -21.880 ? ? ? C34 OLS 41 OLS C35 C25 C 0 1 Y N N -5.152 -0.345 -22.864 ? ? ? C35 OLS 42 OLS C30 C26 C 0 1 Y N N -6.325 0.173 -22.616 ? ? ? C30 OLS 43 OLS C29 C27 C 0 1 Y N N -6.737 0.469 -21.285 ? ? ? C29 OLS 44 OLS C28 C28 C 0 1 Y N N -5.850 0.204 -20.221 ? ? ? C28 OLS 45 OLS O10 O8 O 0 1 N N N 0.218 -1.579 -19.803 ? ? ? O10 OLS 46 OLS O15 O9 O 0 1 N N N -4.322 -0.376 -15.850 ? ? ? O15 OLS 47 OLS O06 O10 O 0 1 N N N -2.487 -2.522 -19.953 ? ? ? O06 OLS 48 OLS CO2 CO4 CO 0 0 N N N -3.855 -3.643 -18.900 ? ? ? CO2 OLS 49 OLS O09 O11 O 0 1 N N N -3.325 -5.467 -19.501 ? ? ? O09 OLS 50 OLS O08 O12 O 0 1 N N N -0.917 -4.489 -19.420 ? ? ? O08 OLS 51 OLS N05 N7 N 0 1 Y N N -5.244 -3.643 -20.516 ? ? ? N05 OLS 52 OLS C32 C29 C 0 1 Y N N -6.532 -3.303 -20.139 ? ? ? C32 OLS 53 OLS C33 C30 C 0 1 Y N N -7.555 -3.288 -21.131 ? ? ? C33 OLS 54 OLS C26 C31 C 0 1 Y N N -7.224 -3.640 -22.463 ? ? ? C26 OLS 55 OLS C25 C32 C 0 1 Y N N -5.876 -3.973 -22.790 ? ? ? C25 OLS 56 OLS C24 C33 C 0 1 Y N N -4.884 -3.993 -21.782 ? ? ? C24 OLS 57 OLS H1 H1 H 0 1 N N N -12.537 0.815 -6.544 ? ? ? H1 OLS 58 OLS H2 H2 H 0 1 N N N -10.418 1.514 -7.985 ? ? ? H2 OLS 59 OLS H3 H3 H 0 1 N N N -9.157 -0.559 -7.748 ? ? ? H3 OLS 60 OLS H4 H4 H 0 1 N N N -10.441 -0.859 -6.528 ? ? ? H4 OLS 61 OLS H5 H5 H 0 1 N N N -13.334 0.202 -10.443 ? ? ? H5 OLS 62 OLS H6 H6 H 0 1 N N N -10.881 1.048 -10.265 ? ? ? H6 OLS 63 OLS H7 H7 H 0 1 N N N -9.653 -0.961 -10.201 ? ? ? H7 OLS 64 OLS H8 H8 H 0 1 N N N -12.382 -1.987 -11.109 ? ? ? H8 OLS 65 OLS H9 H9 H 0 1 N N N -11.388 -0.839 -12.069 ? ? ? H9 OLS 66 OLS H10 H10 H 0 1 N N N -9.516 -2.428 -12.076 ? ? ? H10 OLS 67 OLS H11 H11 H 0 1 N N N -10.456 -3.566 -11.052 ? ? ? H11 OLS 68 OLS H12 H12 H 0 1 N N N -12.167 -3.772 -12.835 ? ? ? H12 OLS 69 OLS H13 H13 H 0 1 N N N -11.252 -2.612 -13.857 ? ? ? H13 OLS 70 OLS H14 H14 H 0 1 N N N -10.136 -5.296 -12.888 ? ? ? H14 OLS 71 OLS H15 H15 H 0 1 N N N -10.928 -5.047 -14.481 ? ? ? H15 OLS 72 OLS H16 H16 H 0 1 N N N -8.099 -5.686 -13.504 ? ? ? H16 OLS 73 OLS H17 H17 H 0 1 N N N -6.601 -3.325 -14.482 ? ? ? H17 OLS 74 OLS H18 H18 H 0 1 N N N -5.896 -4.831 -13.803 ? ? ? H18 OLS 75 OLS H19 H19 H 0 1 N N N -6.308 -6.050 -15.798 ? ? ? H19 OLS 76 OLS H20 H20 H 0 1 N N N -7.438 -4.801 -16.423 ? ? ? H20 OLS 77 OLS H21 H21 H 0 1 N N N -4.681 -5.046 -16.162 ? ? ? H21 OLS 78 OLS H22 H22 H 0 1 N N N -2.840 -4.335 -14.791 ? ? ? H22 OLS 79 OLS H23 H23 H 0 1 N N N -1.424 -5.024 -12.850 ? ? ? H23 OLS 80 OLS H24 H24 H 0 1 N N N 0.159 -3.404 -11.761 ? ? ? H24 OLS 81 OLS H25 H25 H 0 1 N N N 0.292 -1.198 -12.752 ? ? ? H25 OLS 82 OLS H26 H26 H 0 1 N N N -0.954 -0.500 -14.672 ? ? ? H26 OLS 83 OLS H27 H27 H 0 1 N N N 0.860 -1.306 -17.231 ? ? ? H27 OLS 84 OLS H28 H28 H 0 1 N N N 2.763 -1.458 -15.563 ? ? ? H28 OLS 85 OLS H29 H29 H 0 1 N N N 3.356 -3.686 -14.621 ? ? ? H29 OLS 86 OLS H30 H30 H 0 1 N N N 2.147 -5.649 -15.201 ? ? ? H30 OLS 87 OLS H31 H31 H 0 1 N N N 0.348 -5.526 -16.759 ? ? ? H31 OLS 88 OLS H32 H32 H 0 1 N N N -3.353 -1.032 -22.101 ? ? ? H32 OLS 89 OLS H33 H33 H 0 1 N N N -4.866 -0.564 -23.882 ? ? ? H33 OLS 90 OLS H34 H34 H 0 1 N N N -6.996 0.381 -23.436 ? ? ? H34 OLS 91 OLS H35 H35 H 0 1 N N N -7.713 0.890 -21.094 ? ? ? H35 OLS 92 OLS H36 H36 H 0 1 N N N -6.108 0.412 -19.193 ? ? ? H36 OLS 93 OLS H41 H41 H 0 1 N N N -6.757 -3.054 -19.113 ? ? ? H41 OLS 94 OLS H42 H42 H 0 1 N N N -8.567 -3.013 -20.872 ? ? ? H42 OLS 95 OLS H43 H43 H 0 1 N N N -7.988 -3.656 -23.226 ? ? ? H43 OLS 96 OLS H44 H44 H 0 1 N N N -5.612 -4.210 -23.810 ? ? ? H44 OLS 97 OLS H45 H45 H 0 1 N N N -3.868 -4.278 -22.010 ? ? ? H45 OLS 98 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OLS O04 C13 DOUB N N 1 OLS C13 N03 SING N N 2 OLS C13 N02 SING N N 3 OLS N03 C11 SING N N 4 OLS C11 C10 SING N N 5 OLS C11 C12 SING N N 6 OLS C10 S01 SING N N 7 OLS S01 C09 SING N N 8 OLS N02 C12 SING N N 9 OLS C12 C09 SING N N 10 OLS C09 C08 SING N N 11 OLS C08 C07 SING N N 12 OLS C07 C06 SING N N 13 OLS C06 C05 SING N N 14 OLS C05 C01 SING N N 15 OLS C01 O01 DOUB N N 16 OLS C01 N01 SING N N 17 OLS N01 C02 SING N N 18 OLS C02 C37 SING N N 19 OLS C37 C04 SING N N 20 OLS C04 O14 SING N N 21 OLS C04 O03 SING N N 22 OLS O14 CO2 SING N N 23 OLS O03 CO4 SING N N 24 OLS CO4 O05 SING N N 25 OLS CO4 O07 SING N N 26 OLS CO4 N07 SING N N 27 OLS CO4 O12 SING N N 28 OLS CO4 O15 SING N N 29 OLS O05 CO1 SING N N 30 OLS O05 CO2 SING N N 31 OLS O07 CO1 SING N N 32 OLS O07 CO3 SING N N 33 OLS N07 C44 DOUB Y N 34 OLS N07 C40 SING Y N 35 OLS C44 C43 SING Y N 36 OLS C43 C42 DOUB Y N 37 OLS C42 C41 SING Y N 38 OLS C41 C40 DOUB Y N 39 OLS CO1 N04 SING N N 40 OLS CO1 O10 SING N N 41 OLS CO1 O06 SING N N 42 OLS CO1 O08 SING N N 43 OLS N04 C22 DOUB Y N 44 OLS N04 C18 SING Y N 45 OLS C22 C21 SING Y N 46 OLS C21 C20 DOUB Y N 47 OLS C20 C19 SING Y N 48 OLS C19 C18 DOUB Y N 49 OLS O12 CO3 SING N N 50 OLS O12 CO2 SING N N 51 OLS CO3 N06 SING N N 52 OLS CO3 O06 SING N N 53 OLS N06 C34 DOUB Y N 54 OLS N06 C28 SING Y N 55 OLS C34 C35 SING Y N 56 OLS C35 C30 DOUB Y N 57 OLS C30 C29 SING Y N 58 OLS C29 C28 DOUB Y N 59 OLS O06 CO2 SING N N 60 OLS CO2 O09 SING N N 61 OLS CO2 N05 SING N N 62 OLS N05 C32 DOUB Y N 63 OLS N05 C24 SING Y N 64 OLS C32 C33 SING Y N 65 OLS C33 C26 DOUB Y N 66 OLS C26 C25 SING Y N 67 OLS C25 C24 DOUB Y N 68 OLS N03 H1 SING N N 69 OLS C11 H2 SING N N 70 OLS C10 H3 SING N N 71 OLS C10 H4 SING N N 72 OLS N02 H5 SING N N 73 OLS C12 H6 SING N N 74 OLS C09 H7 SING N N 75 OLS C08 H8 SING N N 76 OLS C08 H9 SING N N 77 OLS C07 H10 SING N N 78 OLS C07 H11 SING N N 79 OLS C06 H12 SING N N 80 OLS C06 H13 SING N N 81 OLS C05 H14 SING N N 82 OLS C05 H15 SING N N 83 OLS N01 H16 SING N N 84 OLS C02 H17 SING N N 85 OLS C02 H18 SING N N 86 OLS C37 H19 SING N N 87 OLS C37 H20 SING N N 88 OLS C04 H21 SING N N 89 OLS C44 H22 SING N N 90 OLS C43 H23 SING N N 91 OLS C42 H24 SING N N 92 OLS C41 H25 SING N N 93 OLS C40 H26 SING N N 94 OLS C22 H27 SING N N 95 OLS C21 H28 SING N N 96 OLS C20 H29 SING N N 97 OLS C19 H30 SING N N 98 OLS C18 H31 SING N N 99 OLS C34 H32 SING N N 100 OLS C35 H33 SING N N 101 OLS C30 H34 SING N N 102 OLS C29 H35 SING N N 103 OLS C28 H36 SING N N 104 OLS C32 H41 SING N N 105 OLS C33 H42 SING N N 106 OLS C26 H43 SING N N 107 OLS C25 H44 SING N N 108 OLS C24 H45 SING N N 109 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OLS InChI InChI 1.03 "InChI=1S/C13H21N3O4S.4C5H5N.4Co.4H2O.4O/c17-10(14-6-5-11(18)19)4-2-1-3-9-12-8(7-21-9)15-13(20)16-12;4*1-2-4-6-5-3-1;;;;;;;;;;;;/h8-9,11-12H,1-7H2,(H,14,17)(H2,15,16,20);4*1-5H;;;;;4*1H2;;;;/q-2;;;;;;3*+2;;;;;;;;/p-4/t8-,9-,12-;;;;;;;;;;;;;;;;/m0................/s1" OLS InChIKey InChI 1.03 NCRQDMYNPQXLIW-VNIQYHKJSA-J OLS SMILES_CANONICAL CACTVS 3.385 "O.O.O.O.O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12)NCCC3O[Co]4O[Co]O[Co]O[Co](O3)O4.c5ccncc5.c6ccncc6.c7ccncc7.c8ccncc8" OLS SMILES CACTVS 3.385 "O.O.O.O.O=C(CCCC[CH]1SC[CH]2NC(=O)N[CH]12)NCCC3O[Co]4O[Co]O[Co]O[Co](O3)O4.c5ccncc5.c6ccncc6.c7ccncc7.c8ccncc8" OLS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1[C@H]2[C@@H]([C@@H](S1)CCCCC(=O)NCCC3O[Co]45(O6[Co]7(O4[Co]8(O3)(O7[Co]6(O58)([N]9=CC=CC=C9)([O])[O])([N]1=CC=CC=C1)[O])[N]1=CC=CC=C1)([N]1=CC=CC=C1)[O])NC(=O)N2" OLS SMILES "OpenEye OEToolkits" 2.0.6 "C1C2C(C(S1)CCCCC(=O)NCCC3O[Co]45(O6[Co]7(O4[Co]8(O3)(O7[Co]6(O58)([N]9=CC=CC=C9)([O])[O])([N]1=CC=CC=C1)[O])[N]1=CC=CC=C1)([N]1=CC=CC=C1)[O])NC(=O)N2" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OLS "Create component" 2017-09-20 RCSB OLS "Initial release" 2018-02-28 RCSB ##