data_OM0 # _chem_comp.id OM0 _chem_comp.name "(1R,2S,3R,4R)-5-bromo-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H11 Br O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms C5a-bromo-valienide _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-12 _chem_comp.pdbx_modified_date 2023-03-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 255.063 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OM0 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7UZ1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OM0 O6 O1 O 0 1 N N N 77.294 19.601 -8.979 -0.857 3.007 -0.845 O6 OM0 1 OM0 C6 C1 C 0 1 N N N 76.012 18.980 -9.090 -1.044 2.030 0.181 C6 OM0 2 OM0 C5 C2 C 0 1 N N N 75.004 19.807 -8.361 -0.028 0.929 0.016 C5 OM0 3 OM0 C5A C3 C 0 1 N N N 74.678 19.563 -7.134 -0.461 -0.289 -0.070 C5A OM0 4 OM0 BR5 BR1 BR 0 0 N N N 75.298 17.955 -6.232 -2.329 -0.575 0.004 BR5 OM0 5 OM0 C1 C4 C 0 1 N N R 73.880 20.441 -6.250 0.429 -1.488 -0.226 C1 OM0 6 OM0 C2 C5 C 0 1 N N R 73.744 21.854 -6.814 1.822 -1.054 -0.688 C2 OM0 7 OM0 O2 O2 O 0 1 N N N 72.685 22.507 -6.125 2.725 -2.157 -0.591 O2 OM0 8 OM0 C3 C6 C 0 1 N N S 73.434 21.771 -8.292 2.300 0.086 0.221 C3 OM0 9 OM0 O3 O3 O 0 1 N N N 73.171 23.112 -8.823 3.664 0.396 -0.076 O3 OM0 10 OM0 C4 C7 C 0 1 N N R 74.588 21.102 -9.030 1.421 1.312 -0.043 C4 OM0 11 OM0 O4 O4 O 0 1 N N N 74.291 20.924 -10.399 1.690 2.306 0.948 O4 OM0 12 OM0 H1 H1 H 0 1 N N N 77.940 19.080 -9.441 -1.479 3.747 -0.801 H1 OM0 13 OM0 H2 H2 H 0 1 N N N 75.730 18.905 -10.150 -0.918 2.498 1.157 H2 OM0 14 OM0 H3 H3 H 0 1 N N N 76.051 17.973 -8.649 -2.048 1.612 0.106 H3 OM0 15 OM0 H4 H4 H 0 1 N N N 74.330 20.484 -5.247 -0.002 -2.164 -0.965 H4 OM0 16 OM0 H6 H6 H 0 1 N N N 74.692 22.393 -6.670 1.775 -0.709 -1.720 H6 OM0 17 OM0 H7 H7 H 0 1 N N N 72.890 22.553 -5.199 2.473 -2.920 -1.128 H7 OM0 18 OM0 H8 H8 H 0 1 N N N 72.535 21.151 -8.424 2.212 -0.216 1.264 H8 OM0 19 OM0 H9 H9 H 0 1 N N N 72.449 23.506 -8.347 4.031 1.110 0.463 H9 OM0 20 OM0 H10 H10 H 0 1 N N N 75.447 21.786 -8.956 1.648 1.718 -1.029 H10 OM0 21 OM0 H11 H11 H 0 1 N N N 74.036 21.756 -10.779 1.174 3.117 0.842 H11 OM0 22 OM0 O1 O5 O 0 1 N Y N 72.548 19.791 -6.188 0.537 -2.164 1.028 O1 OM0 23 OM0 H5 H5 H 0 1 N Y N 71.971 20.302 -5.632 -0.307 -2.477 1.380 H5 OM0 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OM0 O4 C4 SING N N 1 OM0 C6 O6 SING N N 2 OM0 C6 C5 SING N N 3 OM0 C4 C5 SING N N 4 OM0 C4 C3 SING N N 5 OM0 O3 C3 SING N N 6 OM0 C5 C5A DOUB N N 7 OM0 C3 C2 SING N N 8 OM0 C5A C1 SING N N 9 OM0 C5A BR5 SING N N 10 OM0 C2 C1 SING N N 11 OM0 C2 O2 SING N N 12 OM0 O6 H1 SING N N 13 OM0 C6 H2 SING N N 14 OM0 C6 H3 SING N N 15 OM0 C1 H4 SING N N 16 OM0 C2 H6 SING N N 17 OM0 O2 H7 SING N N 18 OM0 C3 H8 SING N N 19 OM0 O3 H9 SING N N 20 OM0 C4 H10 SING N N 21 OM0 O4 H11 SING N N 22 OM0 C1 O1 SING N N 23 OM0 O1 H5 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OM0 SMILES ACDLabs 12.01 "OC1C(CO)=C(Br)C(O)C(O)C1O" OM0 InChI InChI 1.03 "InChI=1S/C7H11BrO5/c8-3-2(1-9)4(10)6(12)7(13)5(3)11/h4-7,9-13H,1H2/t4-,5+,6+,7+/m1/s1" OM0 InChIKey InChI 1.03 FJUNXCSYOUCSRK-BWBBJGPYSA-N OM0 SMILES_CANONICAL CACTVS 3.385 "OCC1=C(Br)[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O" OM0 SMILES CACTVS 3.385 "OCC1=C(Br)[CH](O)[CH](O)[CH](O)[CH]1O" OM0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(C1=C([C@@H]([C@@H]([C@H]([C@@H]1O)O)O)O)Br)O" OM0 SMILES "OpenEye OEToolkits" 2.0.7 "C(C1=C(C(C(C(C1O)O)O)O)Br)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OM0 "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,3R,4R)-5-bromo-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol" OM0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},3~{R},4~{R})-5-bromanyl-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OM0 "Create component" 2022-05-12 RCSB OM0 "Modify synonyms" 2022-05-16 RCSB OM0 "Initial release" 2023-04-05 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OM0 _pdbx_chem_comp_synonyms.name C5a-bromo-valienide _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #