data_OML # _chem_comp.id OML _chem_comp.name "(1R,2S,3R,4R)-5-fluoro-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H11 F O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms C5a-fluoro-valienide _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-12 _chem_comp.pdbx_modified_date 2023-03-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 194.158 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OML _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7UZ2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OML O6 O1 O 0 1 N N N 21.798 76.897 7.128 -3.327 -0.012 -0.120 O6 OML 1 OML C6 C1 C 0 1 N N N 21.701 75.474 7.095 -2.377 1.054 -0.169 C6 OML 2 OML C5 C2 C 0 1 N N N 20.430 74.953 7.727 -0.982 0.485 -0.183 C5 OML 3 OML C5A C3 C 0 1 N N N 20.499 74.541 8.979 -0.851 -0.806 -0.151 C5A OML 4 OML F5A F1 F 0 1 N N N 21.680 74.601 9.635 -1.974 -1.556 -0.116 F5A OML 5 OML C1 C4 C 0 1 N N R 19.323 74.165 9.826 0.471 -1.516 -0.150 C1 OML 6 OML C2 C5 C 0 1 N N R 18.029 74.766 9.262 1.579 -0.567 -0.613 C2 OML 7 OML O2 O2 O 0 1 N N N 16.910 74.143 9.871 2.855 -1.165 -0.372 O2 OML 8 OML C3 C6 C 0 1 N N S 17.938 74.487 7.782 1.463 0.739 0.182 C3 OML 9 OML O3 O3 O 0 1 N N N 16.643 74.917 7.308 2.585 1.577 -0.104 O3 OML 10 OML C4 C7 C 0 1 N N R 19.090 75.170 7.032 0.170 1.445 -0.239 C4 OML 11 OML O4 O4 O 0 1 N N N 19.084 74.782 5.639 -0.080 2.537 0.648 O4 OML 12 OML H1 H1 H 0 1 N N N 22.612 77.169 6.720 -4.248 0.281 -0.109 H1 OML 13 OML H2 H2 H 0 1 N N N 21.731 75.145 6.046 -2.538 1.643 -1.072 H2 OML 14 OML H3 H3 H 0 1 N N N 22.560 75.052 7.636 -2.501 1.691 0.707 H3 OML 15 OML H4 H4 H 0 1 N N N 19.474 74.534 10.851 0.422 -2.371 -0.825 H4 OML 16 OML H6 H6 H 0 1 N N N 18.022 75.852 9.438 1.466 -0.363 -1.678 H6 OML 17 OML H7 H7 H 0 1 N N N 16.932 74.297 10.808 2.989 -2.004 -0.832 H7 OML 18 OML H8 H8 H 0 1 N N N 18.033 73.402 7.631 1.434 0.517 1.249 H8 OML 19 OML H9 H9 H 0 1 N N N 15.962 74.471 7.798 2.576 2.421 0.367 H9 OML 20 OML H10 H10 H 0 1 N N N 18.889 76.251 7.073 0.276 1.824 -1.255 H10 OML 21 OML H11 H11 H 0 1 N N N 18.224 74.943 5.269 -0.881 3.038 0.438 H11 OML 22 OML O1 O5 O 0 1 N Y N 19.198 72.693 9.835 0.763 -1.972 1.172 O1 OML 23 OML H5 H5 H 0 1 N Y N 18.454 72.441 10.370 0.108 -2.587 1.530 H5 OML 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OML O4 C4 SING N N 1 OML C4 C5 SING N N 2 OML C4 C3 SING N N 3 OML C6 O6 SING N N 4 OML C6 C5 SING N N 5 OML O3 C3 SING N N 6 OML C5 C5A DOUB N N 7 OML C3 C2 SING N N 8 OML C5A F5A SING N N 9 OML C5A C1 SING N N 10 OML C2 C1 SING N N 11 OML C2 O2 SING N N 12 OML O6 H1 SING N N 13 OML C6 H2 SING N N 14 OML C6 H3 SING N N 15 OML C1 H4 SING N N 16 OML C2 H6 SING N N 17 OML O2 H7 SING N N 18 OML C3 H8 SING N N 19 OML O3 H9 SING N N 20 OML C4 H10 SING N N 21 OML O4 H11 SING N N 22 OML C1 O1 SING N N 23 OML O1 H5 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OML SMILES ACDLabs 12.01 "OC1C(CO)=C(F)C(O)C(O)C1O" OML InChI InChI 1.03 "InChI=1S/C7H11FO5/c8-3-2(1-9)4(10)6(12)7(13)5(3)11/h4-7,9-13H,1H2/t4-,5+,6+,7+/m1/s1" OML InChIKey InChI 1.03 SSCXFYOTIWXWGR-BWBBJGPYSA-N OML SMILES_CANONICAL CACTVS 3.385 "OCC1=C(F)[C@H](O)[C@H](O)[C@@H](O)[C@@H]1O" OML SMILES CACTVS 3.385 "OCC1=C(F)[CH](O)[CH](O)[CH](O)[CH]1O" OML SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C(C1=C([C@@H]([C@@H]([C@H]([C@@H]1O)O)O)O)F)O" OML SMILES "OpenEye OEToolkits" 2.0.7 "C(C1=C(C(C(C(C1O)O)O)O)F)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OML "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S,3R,4R)-5-fluoro-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol" OML "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},3~{R},4~{R})-5-fluoranyl-6-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OML "Create component" 2022-05-12 RCSB OML "Modify synonyms" 2022-05-16 RCSB OML "Initial release" 2023-04-05 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OML _pdbx_chem_comp_synonyms.name C5a-fluoro-valienide _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? #