data_OMY # _chem_comp.id OMY _chem_comp.name "(betaR)-3-chloro-beta-hydroxy-L-tyrosine" _chem_comp.type "L-PEPTIDE LINKING" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C9 H10 Cl N O4" _chem_comp.mon_nstd_parent_comp_id TYR _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-03-27 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.633 _chem_comp.one_letter_code Y _chem_comp.three_letter_code OMY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2WDX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OMY N N N 0 1 N N N Y Y N 12.595 28.918 44.560 2.020 0.981 1.356 N OMY 1 OMY CA CA C 0 1 N N S Y N N 11.101 28.957 44.503 2.155 -0.270 0.599 CA OMY 2 OMY OCZ OCZ O 0 1 N N N N N N 14.142 23.474 43.734 -3.970 1.236 0.379 OCZ OMY 3 OMY CE2 CE2 C 0 1 Y N N N N N 13.552 25.257 45.213 -1.713 1.888 0.004 CE2 OMY 4 OMY CE1 CE1 C 0 1 Y N N N N N 11.999 24.757 43.414 -2.328 -0.434 -0.047 CE1 OMY 5 OMY CZ CZ C 0 1 Y N N N N N 13.228 24.478 44.099 -2.680 0.900 0.114 CZ OMY 6 OMY CG CG C 0 1 Y N N N N N 11.470 26.588 44.972 -0.053 0.214 -0.420 CG OMY 7 OMY CD2 CD2 C 0 1 Y N N N N N 12.684 26.271 45.628 -0.403 1.543 -0.266 CD2 OMY 8 OMY CD1 CD1 C 0 1 Y N N N N N 11.140 25.808 43.842 -1.016 -0.773 -0.317 CD1 OMY 9 OMY CB CB C 0 1 N N R N N N 10.592 27.808 45.497 1.377 -0.158 -0.714 CB OMY 10 OMY CL CL CL 0 0 N N N N N N 11.532 23.823 42.007 -3.536 -1.674 0.091 CL OMY 11 OMY O O O 0 1 N N N Y N Y 11.643 31.186 45.338 4.402 0.391 0.343 O OMY 12 OMY C C C 0 1 N N N Y N Y 10.796 30.521 44.731 3.611 -0.521 0.300 C OMY 13 OMY ODE ODE O 0 1 N N N N N N 10.996 27.939 46.971 1.972 0.848 -1.536 ODE OMY 14 OMY OXT OXT O 0 1 N Y N Y N Y 9.751 31.197 44.177 4.028 -1.758 -0.014 OXT OMY 15 OMY H HN1 H 0 1 N N N Y Y N 12.964 28.909 43.631 2.382 1.763 0.831 HN1 OMY 16 OMY H2 HN2 H 0 1 N Y N Y Y N 12.931 29.726 45.045 1.060 1.139 1.625 HN2 OMY 17 OMY HA HA H 0 1 N N N Y N N 10.541 28.697 43.592 1.757 -1.096 1.187 HA OMY 18 OMY HCZ HCZ H 0 1 N N N N N N 14.348 23.554 42.810 -4.505 1.396 -0.410 HCZ OMY 19 OMY HE2 HE2 H 0 1 N N N N N N 14.470 25.076 45.752 -1.985 2.926 0.124 HE2 OMY 20 OMY HD2 HD2 H 0 1 N N N N N N 12.955 26.847 46.501 0.350 2.313 -0.356 HD2 OMY 21 OMY HD1 HD1 H 0 1 N N N N N N 10.229 26.011 43.298 -0.742 -1.809 -0.447 HD1 OMY 22 OMY HB HB H 0 1 N N N N N N 9.493 27.773 45.487 1.404 -1.115 -1.235 HB OMY 23 OMY HXT HXT H 0 1 N Y N Y N Y 9.844 32.126 44.355 4.971 -1.870 -0.197 HXT OMY 24 OMY HDE HDE H 0 1 N N N N N N 11.943 27.966 47.039 1.983 1.728 -1.135 HDE OMY 25 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OMY N CA SING N N 1 OMY OCZ CZ SING N N 2 OMY CZ CE2 SING Y N 3 OMY CZ CE1 DOUB Y N 4 OMY CE2 CD2 DOUB Y N 5 OMY CD2 CG SING Y N 6 OMY CG CD1 DOUB Y N 7 OMY CG CB SING N N 8 OMY CD1 CE1 SING Y N 9 OMY CE1 CL SING N N 10 OMY C O DOUB N N 11 OMY C CA SING N N 12 OMY C OXT SING N N 13 OMY CA CB SING N N 14 OMY CB ODE SING N N 15 OMY N H SING N N 16 OMY N H2 SING N N 17 OMY CA HA SING N N 18 OMY OCZ HCZ SING N N 19 OMY CE2 HE2 SING N N 20 OMY CD2 HD2 SING N N 21 OMY CD1 HD1 SING N N 22 OMY CB HB SING N N 23 OMY OXT HXT SING N N 24 OMY ODE HDE SING N N 25 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OMY SMILES ACDLabs 10.04 "Clc1cc(ccc1O)C(O)C(C(=O)O)N" OMY SMILES_CANONICAL CACTVS 3.352 "N[C@@H]([C@H](O)c1ccc(O)c(Cl)c1)C(O)=O" OMY SMILES CACTVS 3.352 "N[CH]([CH](O)c1ccc(O)c(Cl)c1)C(O)=O" OMY SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1cc(c(cc1[C@H]([C@@H](C(=O)O)N)O)Cl)O" OMY SMILES "OpenEye OEToolkits" 1.6.1 "c1cc(c(cc1C(C(C(=O)O)N)O)Cl)O" OMY InChI InChI 1.03 "InChI=1S/C9H10ClNO4/c10-5-3-4(1-2-6(5)12)8(13)7(11)9(14)15/h1-3,7-8,12-13H,11H2,(H,14,15)/t7-,8+/m0/s1" OMY InChIKey InChI 1.03 BACZBJKOFPGENQ-JGVFFNPUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OMY "SYSTEMATIC NAME" ACDLabs 10.04 "(betaR)-3-chloro-beta-hydroxy-L-tyrosine" OMY "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2S,3R)-2-amino-3-(3-chloro-4-hydroxy-phenyl)-3-hydroxy-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OMY "Create component" 2009-03-27 EBI OMY "Modify aromatic_flag" 2011-06-04 RCSB OMY "Modify descriptor" 2011-06-04 RCSB OMY "Other modification" 2019-04-16 PDBE OMY "Modify backbone" 2023-11-03 PDBE OMY "Modify PCM" 2024-09-27 PDBE # loop_ _pdbx_chem_comp_pcm.pcm_id _pdbx_chem_comp_pcm.comp_id _pdbx_chem_comp_pcm.modified_residue_id _pdbx_chem_comp_pcm.type _pdbx_chem_comp_pcm.category _pdbx_chem_comp_pcm.position _pdbx_chem_comp_pcm.polypeptide_position _pdbx_chem_comp_pcm.comp_id_linking_atom _pdbx_chem_comp_pcm.modified_residue_id_linking_atom _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 1 OMY TYR Hydroxylation "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 2 OMY TYR Chlorination "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? #