data_OND
#
_chem_comp.id OND
_chem_comp.name "4-(5-{[(2-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H17 N3 O2 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-07-01
_chem_comp.pdbx_modified_date 2019-08-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 407.509
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code OND
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6PK6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
# #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OND C1 C1 C 0 1 N N N 14.356 9.631 -2.704 2.911 -3.206 0.872 C1 OND 1
OND C2 C2 C 0 1 Y N N 12.874 9.616 -2.714 3.380 -1.922 0.333 C2 OND 2
OND O1 O1 O 0 1 N N N 14.951 9.859 -3.760 1.797 -3.293 1.354 O1 OND 3
OND C3 C3 C 0 1 Y N N 12.024 9.393 -1.672 2.665 -0.790 0.329 C3 OND 4
OND C4 C4 C 0 1 Y N N 10.635 9.388 -2.081 3.299 0.324 -0.234 C4 OND 5
OND N1 N1 N 0 1 N N N 14.968 9.388 -1.564 3.712 -4.289 0.827 N1 OND 6
OND C5 C5 C 0 1 Y N N 9.472 9.148 -1.321 2.804 1.655 -0.382 C5 OND 7
OND N2 N2 N 0 1 N N N 10.127 8.568 4.926 -3.124 1.100 0.278 N2 OND 8
OND C6 C6 C 0 1 Y N N 9.550 8.865 0.125 1.450 1.995 0.092 C6 OND 9
OND S1 S1 S 0 1 Y N N 10.476 9.851 1.194 -0.010 1.088 -0.280 S1 OND 10
OND C7 C7 C 0 1 Y N N 8.937 7.864 0.814 1.140 3.058 0.893 C7 OND 11
OND C8 C8 C 0 1 Y N N 9.025 8.021 2.204 -0.187 3.172 1.205 C8 OND 12
OND C9 C9 C 0 1 Y N N 9.960 8.946 2.566 -0.987 2.203 0.667 C9 OND 13
OND C10 C10 C 0 1 N N N 10.573 9.282 3.879 -2.436 2.105 0.854 C10 OND 14
OND O2 O2 O 0 1 N N N 11.443 10.145 3.969 -3.019 2.932 1.531 O2 OND 15
OND C11 C11 C 0 1 N N N 10.861 8.486 6.188 -4.574 1.002 0.465 C11 OND 16
OND C12 C12 C 0 1 Y N N 10.371 9.467 7.221 -5.096 -0.200 -0.277 C12 OND 17
OND C13 C13 C 0 1 Y N N 10.758 10.806 7.157 -5.692 -0.045 -1.513 C13 OND 18
OND C14 C14 C 0 1 Y N N 10.329 11.729 8.090 -6.172 -1.148 -2.195 C14 OND 19
OND C15 C15 C 0 1 Y N N 9.502 11.331 9.114 -6.058 -2.410 -1.642 C15 OND 20
OND C16 C16 C 0 1 Y N N 9.104 10.012 9.207 -5.462 -2.573 -0.407 C16 OND 21
OND C17 C17 C 0 1 Y N N 9.527 9.080 8.275 -4.974 -1.468 0.278 C17 OND 22
OND N3 N3 N 0 1 N N N 9.103 7.759 8.400 -4.367 -1.630 1.526 N3 OND 23
OND C18 C18 C 0 1 Y N N 8.250 9.200 -1.960 3.595 2.628 -0.971 C18 OND 24
OND C19 C19 C 0 1 Y N N 8.139 9.470 -3.314 4.868 2.319 -1.420 C19 OND 25
OND C20 C20 C 0 1 Y N N 9.255 9.702 -4.082 5.362 1.041 -1.285 C20 OND 26
OND C21 C21 C 0 1 Y N N 10.507 9.661 -3.462 4.589 0.036 -0.694 C21 OND 27
OND S2 S2 S 0 1 Y N N 12.041 9.913 -4.218 4.958 -1.657 -0.387 S2 OND 28
OND H1 H1 H 0 1 N N N 12.350 9.237 -0.654 1.664 -0.740 0.732 H1 OND 29
OND H2 H2 H 0 1 N N N 15.967 9.382 -1.524 4.599 -4.220 0.439 H2 OND 30
OND H3 H3 H 0 1 N N N 14.434 9.209 -0.738 3.402 -5.136 1.183 H3 OND 31
OND H4 H4 H 0 1 N N N 9.262 8.075 4.839 -2.659 0.441 -0.261 H4 OND 32
OND H6 H6 H 0 1 N N N 8.435 7.034 0.339 1.884 3.753 1.252 H6 OND 33
OND H8 H8 H 0 1 N N N 8.420 7.471 2.910 -0.572 3.965 1.829 H8 OND 34
OND H11 H11 H 0 1 N N N 10.751 7.469 6.591 -4.796 0.899 1.527 H11 OND 35
OND H12 H12 H 0 1 N N N 11.924 8.689 5.989 -5.051 1.903 0.080 H12 OND 36
OND H13 H13 H 0 1 N N N 11.409 11.128 6.358 -5.783 0.940 -1.947 H13 OND 37
OND H14 H14 H 0 1 N N N 10.642 12.760 8.016 -6.639 -1.023 -3.161 H14 OND 38
OND H15 H15 H 0 1 N N N 9.164 12.050 9.845 -6.434 -3.269 -2.177 H15 OND 39
OND H16 H16 H 0 1 N N N 8.456 9.705 10.015 -5.373 -3.559 0.024 H16 OND 40
OND H17 H17 H 0 1 N N N 8.513 7.672 9.203 -4.030 -0.857 2.005 H17 OND 41
OND H18 H18 H 0 1 N N N 8.593 7.494 7.582 -4.282 -2.515 1.913 H18 OND 42
OND H19 H19 H 0 1 N N N 7.352 9.025 -1.386 3.216 3.634 -1.082 H19 OND 43
OND H20 H20 H 0 1 N N N 7.162 9.499 -3.773 5.477 3.084 -1.878 H20 OND 44
OND H21 H21 H 0 1 N N N 9.167 9.911 -5.138 6.356 0.812 -1.638 H21 OND 45
# #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OND S2 C21 SING Y N 1
OND S2 C2 SING Y N 2
OND C20 C21 DOUB Y N 3
OND C20 C19 SING Y N 4
OND O1 C1 DOUB N N 5
OND C21 C4 SING Y N 6
OND C19 C18 DOUB Y N 7
OND C2 C1 SING N N 8
OND C2 C3 DOUB Y N 9
OND C1 N1 SING N N 10
OND C4 C3 SING Y N 11
OND C4 C5 DOUB Y N 12
OND C18 C5 SING Y N 13
OND C5 C6 SING N N 14
OND C6 C7 DOUB Y N 15
OND C6 S1 SING Y N 16
OND C7 C8 SING Y N 17
OND S1 C9 SING Y N 18
OND C8 C9 DOUB Y N 19
OND C9 C10 SING N N 20
OND C10 O2 DOUB N N 21
OND C10 N2 SING N N 22
OND N2 C11 SING N N 23
OND C11 C12 SING N N 24
OND C13 C12 DOUB Y N 25
OND C13 C14 SING Y N 26
OND C12 C17 SING Y N 27
OND C14 C15 DOUB Y N 28
OND C17 N3 SING N N 29
OND C17 C16 DOUB Y N 30
OND C15 C16 SING Y N 31
OND C3 H1 SING N N 32
OND N1 H2 SING N N 33
OND N1 H3 SING N N 34
OND N2 H4 SING N N 35
OND C7 H6 SING N N 36
OND C8 H8 SING N N 37
OND C11 H11 SING N N 38
OND C11 H12 SING N N 39
OND C13 H13 SING N N 40
OND C14 H14 SING N N 41
OND C15 H15 SING N N 42
OND C16 H16 SING N N 43
OND N3 H17 SING N N 44
OND N3 H18 SING N N 45
OND C18 H19 SING N N 46
OND C19 H20 SING N N 47
OND C20 H21 SING N N 48
# #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OND SMILES ACDLabs 12.01 "C(N)(c4cc3c(c1ccc(s1)C(NCc2c(cccc2)N)=O)cccc3s4)=O"
OND InChI InChI 1.03 "InChI=1S/C21H17N3O2S2/c22-15-6-2-1-4-12(15)11-24-21(26)18-9-8-17(27-18)13-5-3-7-16-14(13)10-19(28-16)20(23)25/h1-10H,11,22H2,(H2,23,25)(H,24,26)"
OND InChIKey InChI 1.03 UQZFCZAYARDQIK-UHFFFAOYSA-N
OND SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1sc2cccc(c3sc(cc3)C(=O)NCc4ccccc4N)c2c1"
OND SMILES CACTVS 3.385 "NC(=O)c1sc2cccc(c3sc(cc3)C(=O)NCc4ccccc4N)c2c1"
OND SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CNC(=O)c2ccc(s2)c3cccc4c3cc(s4)C(=O)N)N"
OND SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CNC(=O)c2ccc(s2)c3cccc4c3cc(s4)C(=O)N)N"
# #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OND "SYSTEMATIC NAME" ACDLabs 12.01 "4-(5-{[(2-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide"
OND "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[5-[(2-aminophenyl)methylcarbamoyl]thiophen-2-yl]-1-benzothiophene-2-carboxamide"
# #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OND "Create component" 2019-07-01 RCSB
OND "Initial release" 2019-08-28 RCSB
##