data_OP4 # _chem_comp.id OP4 _chem_comp.name "5-fluoro-2-({4-[7-({trans-4-[(methylsulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N,N-di(propan-2-yl)benzamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C32 H47 F N6 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2019-07-02 _chem_comp.pdbx_modified_date 2019-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 630.817 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OP4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6PKC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OP4 F F1 F 0 1 N N N -14.680 -18.834 -20.235 5.479 3.051 3.319 F OP4 1 OP4 C30 C1 C 0 1 Y N N -14.994 -17.814 -21.017 5.270 2.148 2.336 C30 OP4 2 OP4 C31 C2 C 0 1 Y N N -14.068 -17.444 -22.037 4.741 2.557 1.129 C31 OP4 3 OP4 C7 C3 C 0 1 Y N N -14.433 -16.374 -22.854 4.530 1.625 0.109 C7 OP4 4 OP4 C6 C4 C 0 1 N N N -13.550 -15.780 -23.904 3.965 2.055 -1.184 C6 OP4 5 OP4 O O1 O 0 1 N N N -12.847 -14.813 -23.495 4.433 1.631 -2.223 O OP4 6 OP4 N N1 N 0 1 N N N -13.460 -16.259 -25.100 2.930 2.918 -1.213 N OP4 7 OP4 C3 C5 C 0 1 N N N -14.138 -17.494 -25.497 2.807 3.950 -0.181 C3 OP4 8 OP4 C5 C6 C 0 1 N N N -13.156 -18.705 -25.661 2.734 3.287 1.196 C5 OP4 9 OP4 C4 C7 C 0 1 N N N -15.011 -17.189 -26.708 4.023 4.876 -0.237 C4 OP4 10 OP4 C1 C8 C 0 1 N N N -12.504 -15.675 -26.067 1.928 2.824 -2.278 C1 OP4 11 OP4 C2 C9 C 0 1 N N N -11.104 -15.681 -25.524 0.552 2.567 -1.662 C2 OP4 12 OP4 C C10 C 0 1 N N N -12.963 -14.261 -26.557 1.898 4.135 -3.067 C OP4 13 OP4 C29 C11 C 0 1 Y N N -16.262 -17.190 -20.852 5.594 0.815 2.541 C29 OP4 14 OP4 C28 C12 C 0 1 Y N N -16.560 -16.079 -21.616 5.386 -0.115 1.543 C28 OP4 15 OP4 C8 C13 C 0 1 Y N N -15.720 -15.686 -22.611 4.859 0.280 0.322 C8 OP4 16 OP4 O1 O2 O 0 1 N N N -16.017 -14.628 -23.375 4.659 -0.634 -0.661 O1 OP4 17 OP4 C9 C14 C 0 1 Y N N -16.709 -14.755 -24.567 4.888 -1.943 -0.372 C9 OP4 18 OP4 C12 C15 C 0 1 Y N N -16.601 -13.748 -25.570 3.883 -2.742 0.188 C12 OP4 19 OP4 N2 N2 N 0 1 Y N N -17.296 -13.936 -26.711 4.150 -4.016 0.454 N2 OP4 20 OP4 C11 C16 C 0 1 Y N N -18.082 -14.963 -26.874 5.339 -4.524 0.196 C11 OP4 21 OP4 N1 N3 N 0 1 Y N N -18.232 -15.882 -25.992 6.306 -3.801 -0.330 N1 OP4 22 OP4 C10 C17 C 0 1 Y N N -17.544 -15.814 -24.806 6.119 -2.523 -0.630 C10 OP4 23 OP4 N3 N4 N 0 1 N N N -15.852 -12.611 -25.424 2.630 -2.211 0.461 N3 OP4 24 OP4 C15 C18 C 0 1 N N N -15.808 -11.446 -26.264 1.775 -2.228 -0.741 C15 OP4 25 OP4 C14 C19 C 0 1 N N N -15.025 -10.760 -25.119 0.623 -2.682 0.157 C14 OP4 26 OP4 C13 C20 C 0 1 N N N -15.062 -12.041 -24.288 1.739 -3.233 1.046 C13 OP4 27 OP4 C27 C21 C 0 1 N N N -13.606 -10.382 -25.526 -0.167 -1.537 0.784 C27 OP4 28 OP4 C26 C22 C 0 1 N N N -13.553 -9.194 -26.479 -1.142 -0.975 -0.256 C26 OP4 29 OP4 N4 N5 N 0 1 N N N -14.303 -7.974 -25.931 -2.010 -2.054 -0.744 N4 OP4 30 OP4 C17 C23 C 0 1 N N N -15.694 -8.329 -25.555 -1.238 -3.088 -1.446 C17 OP4 31 OP4 C16 C24 C 0 1 N N N -15.754 -9.517 -24.571 -0.268 -3.754 -0.464 C16 OP4 32 OP4 C18 C25 C 0 1 N N N -14.216 -6.957 -27.011 -3.079 -1.523 -1.601 C18 OP4 33 OP4 C19 C26 C 0 1 N N N -14.873 -5.615 -26.500 -4.026 -0.664 -0.761 C19 OP4 34 OP4 C24 C27 C 0 1 N N N -14.778 -4.559 -27.546 -4.677 -1.530 0.319 C24 OP4 35 OP4 C23 C28 C 0 1 N N N -15.276 -3.155 -27.140 -5.624 -0.671 1.159 C23 OP4 36 OP4 C22 C29 C 0 1 N N N -14.784 -2.682 -25.759 -6.709 -0.078 0.258 C22 OP4 37 OP4 C21 C30 C 0 1 N N N -15.034 -3.812 -24.731 -6.059 0.787 -0.822 C21 OP4 38 OP4 C20 C31 C 0 1 N N N -14.336 -5.135 -25.156 -5.111 -0.072 -1.662 C20 OP4 39 OP4 N5 N6 N 0 1 N N N -15.563 -1.467 -25.475 -7.617 0.744 1.062 N5 OP4 40 OP4 S S1 S 0 1 N N N -14.748 -0.298 -24.755 -9.230 0.800 0.693 S OP4 41 OP4 O2 O3 O 0 1 N N N -15.642 0.800 -24.500 -9.777 1.698 1.650 O2 OP4 42 OP4 O3 O4 O 0 1 N N N -13.803 0.206 -25.730 -9.262 1.100 -0.695 O3 OP4 43 OP4 C25 C32 C 0 1 N N N -13.876 -0.809 -23.455 -9.822 -0.888 0.994 C25 OP4 44 OP4 H1 H1 H 0 1 N N N -13.132 -17.966 -22.170 4.489 3.596 0.972 H1 OP4 45 OP4 H2 H2 H 0 1 N N N -14.822 -17.766 -24.680 1.900 4.529 -0.353 H2 OP4 46 OP4 H3 H3 H 0 1 N N N -12.578 -18.837 -24.735 3.020 2.238 1.111 H3 OP4 47 OP4 H4 H4 H 0 1 N N N -13.732 -19.619 -25.866 3.415 3.794 1.880 H4 OP4 48 OP4 H5 H5 H 0 1 N N N -12.469 -18.509 -26.497 1.716 3.355 1.580 H5 OP4 49 OP4 H6 H6 H 0 1 N N N -15.658 -16.327 -26.487 3.735 5.826 -0.688 H6 OP4 50 OP4 H7 H7 H 0 1 N N N -14.371 -16.955 -27.572 4.394 5.051 0.772 H7 OP4 51 OP4 H8 H8 H 0 1 N N N -15.634 -18.065 -26.940 4.806 4.412 -0.837 H8 OP4 52 OP4 H9 H9 H 0 1 N N N -12.505 -16.323 -26.956 2.185 2.003 -2.947 H9 OP4 53 OP4 H10 H10 H 0 1 N N N -10.841 -16.698 -25.198 0.294 3.388 -0.993 H10 OP4 54 OP4 H11 H11 H 0 1 N N N -10.405 -15.356 -26.309 -0.194 2.497 -2.454 H11 OP4 55 OP4 H12 H12 H 0 1 N N N -11.040 -14.993 -24.668 0.573 1.634 -1.100 H12 OP4 56 OP4 H13 H13 H 0 1 N N N -13.992 -14.322 -26.942 1.641 4.956 -2.398 H13 OP4 57 OP4 H14 H14 H 0 1 N N N -12.927 -13.552 -25.716 2.879 4.317 -3.506 H14 OP4 58 OP4 H15 H15 H 0 1 N N N -12.292 -13.915 -27.357 1.153 4.065 -3.859 H15 OP4 59 OP4 H16 H16 H 0 1 N N N -16.978 -17.578 -20.143 6.012 0.504 3.487 H16 OP4 60 OP4 H17 H17 H 0 1 N N N -17.464 -15.520 -21.423 5.641 -1.151 1.710 H17 OP4 61 OP4 H18 H18 H 0 1 N N N -18.635 -15.044 -27.798 5.525 -5.563 0.424 H18 OP4 62 OP4 H19 H19 H 0 1 N N N -17.661 -16.591 -24.065 6.919 -1.940 -1.061 H19 OP4 63 OP4 H20 H20 H 0 1 N N N -15.243 -11.572 -27.199 1.622 -1.242 -1.180 H20 OP4 64 OP4 H21 H21 H 0 1 N N N -16.788 -10.999 -26.486 2.073 -2.976 -1.476 H21 OP4 65 OP4 H22 H22 H 0 1 N N N -15.605 -11.963 -23.334 2.028 -4.254 0.798 H22 OP4 66 OP4 H23 H23 H 0 1 N N N -14.084 -12.514 -24.116 1.556 -3.092 2.111 H23 OP4 67 OP4 H24 H24 H 0 1 N N N -13.141 -11.248 -26.020 -0.725 -1.907 1.645 H24 OP4 68 OP4 H25 H25 H 0 1 N N N -13.038 -10.129 -24.619 0.519 -0.753 1.104 H25 OP4 69 OP4 H26 H26 H 0 1 N N N -14.008 -9.488 -27.436 -1.753 -0.197 0.202 H26 OP4 70 OP4 H27 H27 H 0 1 N N N -12.501 -8.918 -26.642 -0.581 -0.554 -1.090 H27 OP4 71 OP4 H29 H29 H 0 1 N N N -16.166 -7.455 -25.082 -1.919 -3.839 -1.849 H29 OP4 72 OP4 H30 H30 H 0 1 N N N -16.249 -8.597 -26.466 -0.676 -2.632 -2.260 H30 OP4 73 OP4 H31 H31 H 0 1 N N N -15.282 -9.217 -23.624 0.349 -4.478 -0.995 H31 OP4 74 OP4 H32 H32 H 0 1 N N N -16.808 -9.775 -24.390 -0.832 -4.259 0.321 H32 OP4 75 OP4 H33 H33 H 0 1 N N N -14.753 -7.316 -27.901 -2.641 -0.915 -2.392 H33 OP4 76 OP4 H34 H34 H 0 1 N N N -13.161 -6.778 -27.267 -3.634 -2.350 -2.044 H34 OP4 77 OP4 H35 H35 H 0 1 N N N -15.941 -5.833 -26.355 -3.464 0.143 -0.291 H35 OP4 78 OP4 H36 H36 H 0 1 N N N -15.371 -4.889 -28.412 -5.239 -2.337 -0.151 H36 OP4 79 OP4 H37 H37 H 0 1 N N N -13.721 -4.469 -27.838 -3.904 -1.952 0.961 H37 OP4 80 OP4 H38 H38 H 0 1 N N N -14.928 -2.435 -27.895 -6.088 -1.288 1.929 H38 OP4 81 OP4 H39 H39 H 0 1 N N N -16.376 -3.170 -27.127 -5.062 0.136 1.630 H39 OP4 82 OP4 H40 H40 H 0 1 N N N -13.709 -2.454 -25.805 -7.272 -0.885 -0.212 H40 OP4 83 OP4 H41 H41 H 0 1 N N N -14.640 -3.499 -23.753 -6.832 1.209 -1.464 H41 OP4 84 OP4 H42 H42 H 0 1 N N N -16.117 -3.989 -24.651 -5.497 1.594 -0.352 H42 OP4 85 OP4 H43 H43 H 0 1 N N N -14.526 -5.905 -24.394 -4.648 0.545 -2.432 H43 OP4 86 OP4 H44 H44 H 0 1 N N N -13.253 -4.962 -25.240 -5.673 -0.879 -2.133 H44 OP4 87 OP4 H45 H45 H 0 1 N N N -15.913 -1.113 -26.342 -7.272 1.256 1.811 H45 OP4 88 OP4 H46 H46 H 0 1 N N N -14.558 -1.202 -22.687 -9.652 -1.152 2.037 H46 OP4 89 OP4 H47 H47 H 0 1 N N N -13.182 -1.602 -23.768 -10.888 -0.943 0.773 H47 OP4 90 OP4 H48 H48 H 0 1 N N N -13.305 0.036 -23.042 -9.281 -1.582 0.350 H48 OP4 91 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OP4 C24 C23 SING N N 1 OP4 C24 C19 SING N N 2 OP4 C23 C22 SING N N 3 OP4 C18 C19 SING N N 4 OP4 C18 N4 SING N N 5 OP4 C11 N2 DOUB Y N 6 OP4 C11 N1 SING Y N 7 OP4 N2 C12 SING Y N 8 OP4 C4 C3 SING N N 9 OP4 C C1 SING N N 10 OP4 C19 C20 SING N N 11 OP4 C26 N4 SING N N 12 OP4 C26 C27 SING N N 13 OP4 C15 N3 SING N N 14 OP4 C15 C14 SING N N 15 OP4 C1 C2 SING N N 16 OP4 C1 N SING N N 17 OP4 N1 C10 DOUB Y N 18 OP4 N4 C17 SING N N 19 OP4 C22 N5 SING N N 20 OP4 C22 C21 SING N N 21 OP4 O3 S DOUB N N 22 OP4 C5 C3 SING N N 23 OP4 C12 N3 SING N N 24 OP4 C12 C9 DOUB Y N 25 OP4 C17 C16 SING N N 26 OP4 C27 C14 SING N N 27 OP4 C3 N SING N N 28 OP4 N5 S SING N N 29 OP4 N3 C13 SING N N 30 OP4 C20 C21 SING N N 31 OP4 C14 C16 SING N N 32 OP4 C14 C13 SING N N 33 OP4 N C6 SING N N 34 OP4 C10 C9 SING Y N 35 OP4 S O2 DOUB N N 36 OP4 S C25 SING N N 37 OP4 C9 O1 SING N N 38 OP4 C6 O DOUB N N 39 OP4 C6 C7 SING N N 40 OP4 O1 C8 SING N N 41 OP4 C7 C8 DOUB Y N 42 OP4 C7 C31 SING Y N 43 OP4 C8 C28 SING Y N 44 OP4 C31 C30 DOUB Y N 45 OP4 C28 C29 DOUB Y N 46 OP4 C30 C29 SING Y N 47 OP4 C30 F SING N N 48 OP4 C31 H1 SING N N 49 OP4 C3 H2 SING N N 50 OP4 C5 H3 SING N N 51 OP4 C5 H4 SING N N 52 OP4 C5 H5 SING N N 53 OP4 C4 H6 SING N N 54 OP4 C4 H7 SING N N 55 OP4 C4 H8 SING N N 56 OP4 C1 H9 SING N N 57 OP4 C2 H10 SING N N 58 OP4 C2 H11 SING N N 59 OP4 C2 H12 SING N N 60 OP4 C H13 SING N N 61 OP4 C H14 SING N N 62 OP4 C H15 SING N N 63 OP4 C29 H16 SING N N 64 OP4 C28 H17 SING N N 65 OP4 C11 H18 SING N N 66 OP4 C10 H19 SING N N 67 OP4 C15 H20 SING N N 68 OP4 C15 H21 SING N N 69 OP4 C13 H22 SING N N 70 OP4 C13 H23 SING N N 71 OP4 C27 H24 SING N N 72 OP4 C27 H25 SING N N 73 OP4 C26 H26 SING N N 74 OP4 C26 H27 SING N N 75 OP4 C17 H29 SING N N 76 OP4 C17 H30 SING N N 77 OP4 C16 H31 SING N N 78 OP4 C16 H32 SING N N 79 OP4 C18 H33 SING N N 80 OP4 C18 H34 SING N N 81 OP4 C19 H35 SING N N 82 OP4 C24 H36 SING N N 83 OP4 C24 H37 SING N N 84 OP4 C23 H38 SING N N 85 OP4 C23 H39 SING N N 86 OP4 C22 H40 SING N N 87 OP4 C21 H41 SING N N 88 OP4 C21 H42 SING N N 89 OP4 C20 H43 SING N N 90 OP4 C20 H44 SING N N 91 OP4 N5 H45 SING N N 92 OP4 C25 H46 SING N N 93 OP4 C25 H47 SING N N 94 OP4 C25 H48 SING N N 95 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OP4 SMILES ACDLabs 12.01 "Fc1ccc(c(c1)C(=O)N(C(C)C)C(C)C)Oc5c(N2CC3(C2)CCN(CC3)CC4CCC(CC4)NS(=O)(C)=O)ncnc5" OP4 InChI InChI 1.03 "InChI=1S/C32H47FN6O4S/c1-22(2)39(23(3)4)31(40)27-16-25(33)8-11-28(27)43-29-17-34-21-35-30(29)38-19-32(20-38)12-14-37(15-13-32)18-24-6-9-26(10-7-24)36-44(5,41)42/h8,11,16-17,21-24,26,36H,6-7,9-10,12-15,18-20H2,1-5H3/t24-,26-" OP4 InChIKey InChI 1.03 ADHHOUXZPBYYSU-YOCNBXQISA-N OP4 SMILES_CANONICAL CACTVS 3.385 "CC(C)N(C(C)C)C(=O)c1cc(F)ccc1Oc2cncnc2N3CC4(CCN(CC4)C[C@@H]5CC[C@H](CC5)N[S](C)(=O)=O)C3" OP4 SMILES CACTVS 3.385 "CC(C)N(C(C)C)C(=O)c1cc(F)ccc1Oc2cncnc2N3CC4(CCN(CC4)C[CH]5CC[CH](CC5)N[S](C)(=O)=O)C3" OP4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)N(C(C)C)C(=O)c1cc(ccc1Oc2cncnc2N3CC4(C3)CCN(CC4)CC5CCC(CC5)NS(=O)(=O)C)F" OP4 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)N(C(C)C)C(=O)c1cc(ccc1Oc2cncnc2N3CC4(C3)CCN(CC4)CC5CCC(CC5)NS(=O)(=O)C)F" # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OP4 "SYSTEMATIC NAME" ACDLabs 12.01 "5-fluoro-2-({4-[7-({trans-4-[(methylsulfonyl)amino]cyclohexyl}methyl)-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl}oxy)-N,N-di(propan-2-yl)benzamide" OP4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-fluoranyl-2-[4-[7-[[4-(methylsulfonylamino)cyclohexyl]methyl]-2,7-diazaspiro[3.5]nonan-2-yl]pyrimidin-5-yl]oxy-~{N},~{N}-di(propan-2-yl)benzamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OP4 "Create component" 2019-07-02 RCSB OP4 "Initial release" 2019-12-18 RCSB ##