data_OPL
# 
_chem_comp.id                                    OPL 
_chem_comp.name                                  "(2R,3R)-2,4,4-trihydroxy-3-methylbutanal" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H10 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2012-12-21 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        134.130 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OPL 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4IHA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OPL C1  C1  C 0 1 N N N N N N -24.360 14.915 -18.839 -1.619 -0.147 -0.225 C1  OPL 1  
OPL O1  O1  O 0 1 N N N N N N -23.651 14.871 -17.598 -2.686 0.757  0.072  O1  OPL 2  
OPL C2  C2  C 0 1 N N R N N N -25.144 16.145 -19.114 -0.325 0.367  0.408  C2  OPL 3  
OPL O2  O2  O 0 1 N N N N N N -25.050 13.719 -19.242 -1.928 -1.438 0.303  O2  OPL 4  
OPL C3  C3  C 0 1 N N R N N N -26.377 16.057 -19.501 0.817  -0.600 0.090  C3  OPL 5  
OPL O3  O3  O 0 1 N N N N N N -27.117 16.008 -17.185 3.058  0.120  0.189  O3  OPL 6  
OPL C4  C4  C 0 1 N N N N N N -27.416 16.089 -18.444 2.064  -0.161 0.814  C4  OPL 7  
OPL O4  O4  O 0 1 N N N N N N -26.381 14.797 -19.960 1.060  -0.604 -1.318 O4  OPL 8  
OPL C5  C5  C 0 1 N N N N N N -25.023 17.256 -18.079 0.006  1.750  -0.158 C5  OPL 9  
OPL H2  H2  H 0 1 N N N N N N -24.617 16.575 -19.978 -0.451 0.438  1.488  H2  OPL 10 
OPL H3  H3  H 0 1 N N N N N N -26.627 16.782 -20.290 0.544  -1.604 0.414  H3  OPL 11 
OPL H4  H4  H 0 1 N N N N N N -28.453 16.183 -18.731 2.068  -0.097 1.892  H4  OPL 12 
OPL HO4 HO4 H 0 1 N N N N N N -27.246 14.582 -20.287 1.309  0.259  -1.676 HO4 OPL 13 
OPL H5  H5  H 0 1 N N N N N N -25.643 18.112 -18.385 -0.808 2.439  0.069  H5  OPL 14 
OPL H5A H5A H 0 1 N N N N N N -25.366 16.886 -17.102 0.928  2.116  0.293  H5A OPL 15 
OPL H5B H5B H 0 1 N N N N N N -23.972 17.573 -18.002 0.132  1.680  -1.238 H5B OPL 16 
OPL H8  H8  H 0 1 N N N N N N -23.187 14.045 -17.527 -3.539 0.493  -0.299 H8  OPL 17 
OPL H9  H9  H 0 1 N N N N N N -23.549 14.985 -19.579 -1.493 -0.217 -1.305 H9  OPL 18 
OPL H10 H10 H 0 1 N N N N N N -25.481 13.867 -20.075 -2.054 -1.451 1.262  H10 OPL 19 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OPL C1 O1  SING N N 1  
OPL C1 C2  SING N N 2  
OPL C1 O2  SING N N 3  
OPL C2 C3  SING N N 4  
OPL C2 C5  SING N N 5  
OPL C2 H2  SING N N 6  
OPL C3 C4  SING N N 7  
OPL C3 O4  SING N N 8  
OPL C3 H3  SING N N 9  
OPL O3 C4  DOUB N N 10 
OPL C4 H4  SING N N 11 
OPL O4 HO4 SING N N 12 
OPL C5 H5  SING N N 13 
OPL C5 H5A SING N N 14 
OPL C5 H5B SING N N 15 
OPL O1 H8  SING N N 16 
OPL C1 H9  SING N N 17 
OPL O2 H10 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OPL SMILES           ACDLabs              12.01 "O=CC(O)C(C)C(O)O"                                               
OPL InChI            InChI                1.03  "InChI=1S/C5H10O4/c1-3(5(8)9)4(7)2-6/h2-5,7-9H,1H3/t3-,4+/m1/s1" 
OPL InChIKey         InChI                1.03  NTSABUYTFOFFJR-DMTCNVIQSA-N                                      
OPL SMILES_CANONICAL CACTVS               3.370 "C[C@@H](C(O)O)[C@@H](O)C=O"                                     
OPL SMILES           CACTVS               3.370 "C[CH](C(O)O)[CH](O)C=O"                                         
OPL SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H]([C@H](C=O)O)C(O)O"                                       
OPL SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C(C=O)O)C(O)O"                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OPL "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,3R)-2,4,4-trihydroxy-3-methylbutanal"     
OPL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,3R)-3-methyl-2,4,4-tris(oxidanyl)butanal" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OPL "Create component" 2012-12-21 RCSB 
OPL "Initial release"  2013-01-18 RCSB 
OPL "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            OPL 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
#