data_OS9 # _chem_comp.id OS9 _chem_comp.name "8-[[3-(2-methoxyphenoxy)phenyl]methyl]-1-(2-phenylethyl)-1,3,8-triazaspiro[4.5]decan-4-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H33 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms LMD-009 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-08-24 _chem_comp.pdbx_modified_date 2024-02-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 471.591 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OS9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8KFX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OS9 O1 O1 O 0 1 N N N N N N 120.610 127.008 164.186 5.483 -2.199 2.092 O1 OS9 1 OS9 C1 C1 C 0 1 N N N N N N 120.114 126.002 165.063 6.335 -2.678 3.134 C1 OS9 2 OS9 C5 C2 C 0 1 Y N N N N N 124.655 127.212 163.356 7.096 0.550 -0.534 C5 OS9 3 OS9 C6 C3 C 0 1 Y N N N N N 123.762 128.153 162.860 5.787 0.133 -0.695 C6 OS9 4 OS9 C4 C4 C 0 1 Y N N N N N 124.202 126.184 164.141 7.864 0.045 0.498 C4 OS9 5 OS9 C3 C5 C 0 1 Y N N N N N 122.850 126.082 164.442 7.326 -0.876 1.378 C3 OS9 6 OS9 O3 O2 O 0 1 N N N N N N 126.074 129.288 167.962 -1.505 3.772 1.464 O3 OS9 7 OS9 C2 C6 C 0 1 Y N N N N N 121.953 127.016 163.948 6.014 -1.294 1.227 C2 OS9 8 OS9 O2 O3 O 0 1 N N N N N N 121.506 128.980 162.669 3.956 -1.204 0.025 O2 OS9 9 OS9 C10 C7 C 0 1 Y N N N N N 121.160 132.578 163.220 2.526 -0.787 -3.294 C10 OS9 10 OS9 C11 C8 C 0 1 Y N N N N N 121.637 132.684 164.513 1.787 0.369 -3.112 C11 OS9 11 OS9 C12 C9 C 0 1 Y N N N N N 122.086 131.565 165.194 1.775 0.997 -1.881 C12 OS9 12 OS9 C13 C10 C 0 1 Y N N N N N 122.014 130.334 164.558 2.501 0.473 -0.828 C13 OS9 13 OS9 C14 C11 C 0 1 N N N N N N 122.600 131.673 166.610 0.970 2.256 -1.686 C14 OS9 14 OS9 C15 C12 C 0 1 N N N N N N 124.420 132.003 168.122 -0.366 1.287 0.085 C15 OS9 15 OS9 C16 C13 C 0 1 N N N N N N 125.854 132.457 168.287 -1.772 0.796 0.441 C16 OS9 16 OS9 C17 C14 C 0 1 N N N N N N 126.791 131.589 167.442 -2.742 1.973 0.405 C17 OS9 17 OS9 C18 C15 C 0 1 N N N N N N 126.303 131.546 165.992 -2.704 2.649 -0.963 C18 OS9 18 OS9 C19 C16 C 0 1 N N N N N N 124.845 131.142 165.932 -1.268 3.081 -1.274 C19 OS9 19 OS9 C20 C17 C 0 1 N N N N N N 126.903 130.185 168.037 -2.409 2.965 1.492 C20 OS9 20 OS9 C21 C18 C 0 1 N N N N N N 128.849 131.353 168.621 -4.222 1.715 2.169 C21 OS9 21 OS9 C22 C19 C 0 1 N N N N N N 128.522 133.416 167.216 -4.280 0.094 0.357 C22 OS9 22 OS9 C23 C20 C 0 1 N N N N N N 128.702 134.304 168.446 -5.760 -0.283 0.444 C23 OS9 23 OS9 C24 C21 C 0 1 Y N N N N N 128.509 135.760 168.117 -5.930 -1.737 0.087 C24 OS9 24 OS9 C25 C22 C 0 1 Y N N N N N 127.384 136.189 167.434 -6.147 -2.105 -1.228 C25 OS9 25 OS9 C26 C23 C 0 1 Y N N N N N 127.202 137.531 167.143 -6.304 -3.438 -1.555 C26 OS9 26 OS9 C27 C24 C 0 1 Y N N N N N 128.150 138.453 167.511 -6.244 -4.404 -0.568 C27 OS9 27 OS9 C28 C25 C 0 1 Y N N N N N 129.278 138.041 168.171 -6.026 -4.036 0.747 C28 OS9 28 OS9 C29 C26 C 0 1 Y N N N N N 129.453 136.704 168.483 -5.865 -2.703 1.073 C29 OS9 29 OS9 C7 C27 C 0 1 Y N N N N N 122.424 128.054 163.147 5.243 -0.793 0.181 C7 OS9 30 OS9 C8 C28 C 0 1 Y N N N N N 121.555 130.237 163.261 3.242 -0.686 -1.008 C8 OS9 31 OS9 C9 C29 C 0 1 Y N N N N N 121.105 131.351 162.587 3.248 -1.319 -2.244 C9 OS9 32 OS9 N1 N1 N 0 1 N N N N N N 124.010 132.062 166.714 -0.387 1.907 -1.247 N1 OS9 33 OS9 N2 N2 N 0 1 N N N N N N 128.057 130.106 168.697 -3.290 2.800 2.501 N2 OS9 34 OS9 N3 N3 N 0 1 N N N N N N 128.190 132.022 167.487 -4.113 1.511 0.705 N3 OS9 35 OS9 H1 H1 H 0 1 N N N N N N 119.024 126.110 165.166 5.789 -3.392 3.751 H1 OS9 36 OS9 H2 H2 H 0 1 N N N N N N 120.347 125.009 164.651 7.206 -3.166 2.696 H2 OS9 37 OS9 H3 H3 H 0 1 N N N N N N 120.588 126.110 166.050 6.661 -1.840 3.750 H3 OS9 38 OS9 H4 H4 H 0 1 N N N N N N 125.707 127.290 163.123 7.520 1.268 -1.220 H4 OS9 39 OS9 H5 H5 H 0 1 N N N N N N 124.122 128.965 162.246 5.189 0.529 -1.502 H5 OS9 40 OS9 H6 H6 H 0 1 N N N N N N 124.897 125.452 164.526 8.887 0.370 0.617 H6 OS9 41 OS9 H7 H7 H 0 1 N N N N N N 122.496 125.272 165.063 7.928 -1.269 2.184 H7 OS9 42 OS9 H8 H8 H 0 1 N N N N N N 120.827 133.463 162.699 2.533 -1.276 -4.256 H8 OS9 43 OS9 H9 H9 H 0 1 N N N N N N 121.660 133.649 164.997 1.220 0.780 -3.933 H9 OS9 44 OS9 H10 H10 H 0 1 N N N N N N 122.321 129.442 165.084 2.491 0.965 0.133 H10 OS9 45 OS9 H11 H11 H 0 1 N N N N N N 121.996 132.425 167.139 1.448 2.880 -0.930 H11 OS9 46 OS9 H12 H12 H 0 1 N N N N N N 122.476 130.694 167.097 0.918 2.803 -2.628 H12 OS9 47 OS9 H13 H13 H 0 1 N N N N N N 123.765 132.657 168.716 -0.040 2.021 0.822 H13 OS9 48 OS9 H14 H14 H 0 1 N N N N N N 124.327 130.967 168.481 0.324 0.444 0.082 H14 OS9 49 OS9 H15 H15 H 0 1 N N N N N N 126.140 132.374 169.346 -2.087 0.042 -0.280 H15 OS9 50 OS9 H16 H16 H 0 1 N N N N N N 125.942 133.505 167.964 -1.763 0.362 1.441 H16 OS9 51 OS9 H17 H17 H 0 1 N N N N N N 126.904 130.816 165.430 -3.047 1.949 -1.725 H17 OS9 52 OS9 H18 H18 H 0 1 N N N N N N 126.421 132.542 165.541 -3.354 3.524 -0.955 H18 OS9 53 OS9 H19 H19 H 0 1 N N N N N N 124.511 131.156 164.884 -1.233 3.539 -2.263 H19 OS9 54 OS9 H20 H20 H 0 1 N N N N N N 124.737 130.125 166.338 -0.936 3.803 -0.528 H20 OS9 55 OS9 H21 H21 H 0 1 N N N N N N 129.909 131.148 168.411 -3.940 0.803 2.696 H21 OS9 56 OS9 H22 H22 H 0 1 N N N N N N 128.766 131.944 169.545 -5.240 2.000 2.434 H22 OS9 57 OS9 H23 H23 H 0 1 N N N N N N 129.462 133.435 166.645 -3.707 -0.521 1.052 H23 OS9 58 OS9 H24 H24 H 0 1 N N N N N N 127.713 133.844 166.605 -3.921 -0.075 -0.658 H24 OS9 59 OS9 H25 H25 H 0 1 N N N N N N 127.965 134.010 169.208 -6.119 -0.113 1.460 H25 OS9 60 OS9 H26 H26 H 0 1 N N N N N N 129.718 134.160 168.843 -6.333 0.332 -0.250 H26 OS9 61 OS9 H27 H27 H 0 1 N N N N N N 126.640 135.470 167.125 -6.194 -1.350 -1.999 H27 OS9 62 OS9 H28 H28 H 0 1 N N N N N N 126.311 137.853 166.625 -6.473 -3.726 -2.582 H28 OS9 63 OS9 H29 H29 H 0 1 N N N N N N 128.007 139.499 167.281 -6.367 -5.446 -0.824 H29 OS9 64 OS9 H30 H30 H 0 1 N N N N N N 130.033 138.762 168.449 -5.980 -4.791 1.518 H30 OS9 65 OS9 H31 H31 H 0 1 N N N N N N 130.338 136.393 169.019 -5.691 -2.416 2.100 H31 OS9 66 OS9 H32 H32 H 0 1 N N N N N N 120.717 131.267 161.583 3.824 -2.221 -2.386 H32 OS9 67 OS9 H34 H34 H 0 1 N N N N N N 128.356 129.290 169.192 -3.305 3.318 3.321 H34 OS9 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OS9 C9 C10 DOUB Y N 1 OS9 C9 C8 SING Y N 2 OS9 O2 C7 SING N N 3 OS9 O2 C8 SING N N 4 OS9 C6 C7 DOUB Y N 5 OS9 C6 C5 SING Y N 6 OS9 C7 C2 SING Y N 7 OS9 C10 C11 SING Y N 8 OS9 C8 C13 DOUB Y N 9 OS9 C5 C4 DOUB Y N 10 OS9 C2 O1 SING N N 11 OS9 C2 C3 DOUB Y N 12 OS9 C4 C3 SING Y N 13 OS9 O1 C1 SING N N 14 OS9 C11 C12 DOUB Y N 15 OS9 C13 C12 SING Y N 16 OS9 C12 C14 SING N N 17 OS9 C19 C18 SING N N 18 OS9 C19 N1 SING N N 19 OS9 C18 C17 SING N N 20 OS9 C14 N1 SING N N 21 OS9 N1 C15 SING N N 22 OS9 C26 C25 DOUB Y N 23 OS9 C26 C27 SING Y N 24 OS9 C22 N3 SING N N 25 OS9 C22 C23 SING N N 26 OS9 C25 C24 SING Y N 27 OS9 C17 N3 SING N N 28 OS9 C17 C20 SING N N 29 OS9 C17 C16 SING N N 30 OS9 N3 C21 SING N N 31 OS9 C27 C28 DOUB Y N 32 OS9 O3 C20 DOUB N N 33 OS9 C20 N2 SING N N 34 OS9 C24 C23 SING N N 35 OS9 C24 C29 DOUB Y N 36 OS9 C15 C16 SING N N 37 OS9 C28 C29 SING Y N 38 OS9 C21 N2 SING N N 39 OS9 C1 H1 SING N N 40 OS9 C1 H2 SING N N 41 OS9 C1 H3 SING N N 42 OS9 C5 H4 SING N N 43 OS9 C6 H5 SING N N 44 OS9 C4 H6 SING N N 45 OS9 C3 H7 SING N N 46 OS9 C10 H8 SING N N 47 OS9 C11 H9 SING N N 48 OS9 C13 H10 SING N N 49 OS9 C14 H11 SING N N 50 OS9 C14 H12 SING N N 51 OS9 C15 H13 SING N N 52 OS9 C15 H14 SING N N 53 OS9 C16 H15 SING N N 54 OS9 C16 H16 SING N N 55 OS9 C18 H17 SING N N 56 OS9 C18 H18 SING N N 57 OS9 C19 H19 SING N N 58 OS9 C19 H20 SING N N 59 OS9 C21 H21 SING N N 60 OS9 C21 H22 SING N N 61 OS9 C22 H23 SING N N 62 OS9 C22 H24 SING N N 63 OS9 C23 H25 SING N N 64 OS9 C23 H26 SING N N 65 OS9 C25 H27 SING N N 66 OS9 C26 H28 SING N N 67 OS9 C27 H29 SING N N 68 OS9 C28 H30 SING N N 69 OS9 C29 H31 SING N N 70 OS9 C9 H32 SING N N 71 OS9 N2 H34 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OS9 InChI InChI 1.06 "InChI=1S/C29H33N3O3/c1-34-26-12-5-6-13-27(26)35-25-11-7-10-24(20-25)21-31-18-15-29(16-19-31)28(33)30-22-32(29)17-14-23-8-3-2-4-9-23/h2-13,20H,14-19,21-22H2,1H3,(H,30,33)" OS9 InChIKey InChI 1.06 MRXASGVUQJVWMP-UHFFFAOYSA-N OS9 SMILES_CANONICAL CACTVS 3.385 "COc1ccccc1Oc2cccc(CN3CCC4(CC3)N(CCc5ccccc5)CNC4=O)c2" OS9 SMILES CACTVS 3.385 "COc1ccccc1Oc2cccc(CN3CCC4(CC3)N(CCc5ccccc5)CNC4=O)c2" OS9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccccc1Oc2cccc(c2)CN3CCC4(CC3)C(=O)NCN4CCc5ccccc5" OS9 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccccc1Oc2cccc(c2)CN3CCC4(CC3)C(=O)NCN4CCc5ccccc5" # _pdbx_chem_comp_identifier.comp_id OS9 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "8-[[3-(2-methoxyphenoxy)phenyl]methyl]-1-(2-phenylethyl)-1,3,8-triazaspiro[4.5]decan-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OS9 "Create component" 2023-08-24 PDBC OS9 "Initial release" 2024-02-07 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OS9 _pdbx_chem_comp_synonyms.name LMD-009 _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #