data_OTI # _chem_comp.id OTI _chem_comp.name "3-[(8~{a}~{S})-7-[[5-ethoxycarbonyl-4-(3-fluoranyl-2-methyl-phenyl)-2-(1,3-thiazol-2-yl)-1,4-dihydropyrimidin-6-yl]methyl]-3-oxidanylidene-5,6,8,8~{a}-tetrahydro-1~{H}-imidazo[1,5-a]pyrazin-2-yl]-2,2-dimethyl-propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAD _chem_comp.formula "C29 H35 F N6 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Linvencorvir _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-02-10 _chem_comp.pdbx_modified_date 2023-03-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 598.689 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OTI _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8I71 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBJ # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OTI C10 C1 C 0 1 N N N 27.605 9.454 -51.210 4.330 1.087 1.219 C10 OTI 1 OTI C11 C2 C 0 1 N N N 26.804 10.395 -53.530 6.368 -0.301 0.365 C11 OTI 2 OTI C14 C3 C 0 1 N N N 25.162 9.758 -55.282 7.124 2.063 0.079 C14 OTI 3 OTI C15 C4 C 0 1 N N N 25.982 8.106 -53.507 8.676 0.189 -0.399 C15 OTI 4 OTI C18 C5 C 0 1 N N N 26.513 11.403 -46.797 -0.517 0.512 2.013 C18 OTI 5 OTI C20 C6 C 0 1 N N N 26.412 12.725 -44.638 -2.653 -0.512 1.297 C20 OTI 6 OTI C23 C7 C 0 1 N N N 29.111 12.096 -44.224 -3.564 1.885 0.322 C23 OTI 7 OTI C25 C8 C 0 1 Y N N 30.480 11.714 -44.189 -4.056 3.236 -0.005 C25 OTI 8 OTI C27 C9 C 0 1 Y N N 32.499 10.822 -44.759 -3.968 5.425 -0.335 C27 OTI 9 OTI C28 C10 C 0 1 Y N N 32.944 11.615 -43.758 -5.271 5.289 -0.613 C28 OTI 10 OTI C30 C11 C 0 1 Y N N 27.271 14.761 -43.469 -3.860 -1.255 -0.704 C30 OTI 11 OTI C31 C12 C 0 1 Y N N 27.942 15.347 -44.561 -3.476 -0.608 -1.864 C31 OTI 12 OTI C32 C13 C 0 1 Y N N 28.074 16.725 -44.720 -3.369 -1.314 -3.047 C32 OTI 13 OTI C33 C14 C 0 1 Y N N 27.488 17.622 -43.799 -3.646 -2.668 -3.072 C33 OTI 14 OTI C34 C15 C 0 1 Y N N 26.822 17.009 -42.736 -4.030 -3.317 -1.911 C34 OTI 15 OTI C01 C16 C 0 1 N N S 28.245 10.126 -49.981 2.908 1.240 0.658 C01 OTI 16 OTI C02 C17 C 0 1 N N N 27.186 10.303 -48.872 1.863 0.850 1.708 C02 OTI 17 OTI N03 N1 N 0 1 N N N 27.524 11.234 -47.821 0.569 0.660 1.035 N03 OTI 18 OTI C04 C18 C 0 1 N N N 27.950 12.528 -48.397 0.589 -0.469 0.097 C04 OTI 19 OTI C05 C19 C 0 1 N N N 29.047 12.352 -49.445 1.584 -0.185 -1.039 C05 OTI 20 OTI N06 N2 N 0 1 N N N 28.497 11.485 -50.432 2.851 0.218 -0.410 N06 OTI 21 OTI C07 C20 C 0 1 N N N 27.929 11.680 -51.660 4.075 -0.266 -0.617 C07 OTI 22 OTI O08 O1 O 0 1 N N N 27.938 12.796 -52.184 4.352 -1.000 -1.546 O08 OTI 23 OTI N09 N3 N 0 1 N N N 27.386 10.548 -52.171 4.972 0.137 0.296 N09 OTI 24 OTI C12 C21 C 0 1 N N N 25.573 9.581 -53.815 7.239 0.640 -0.470 C12 OTI 25 OTI C13 C22 C 0 1 N N N 24.414 10.022 -52.914 6.768 0.615 -1.925 C13 OTI 26 OTI O16 O2 O 0 1 N N N 27.017 7.681 -54.050 8.972 -0.784 0.252 O16 OTI 27 OTI O17 O3 O 0 1 N N N 25.252 7.483 -52.699 9.626 0.870 -1.060 O17 OTI 28 OTI C19 C23 C 0 1 N N N 27.121 12.076 -45.599 -1.844 0.566 1.302 C19 OTI 29 OTI C21 C24 C 0 1 N N S 27.173 13.280 -43.390 -3.976 -0.483 0.585 C21 OTI 30 OTI N22 N4 N 0 1 N N N 28.578 12.766 -43.289 -4.387 0.884 0.288 N22 OTI 31 OTI N24 N5 N 0 1 N N N 28.461 11.732 -45.397 -2.235 1.711 0.659 N24 OTI 32 OTI N26 N6 N 0 1 Y N N 31.122 10.893 -45.026 -3.335 4.324 -0.015 N26 OTI 33 OTI S29 S1 S 0 1 Y N N 31.605 12.482 -43.090 -5.709 3.643 -0.454 S29 OTI 34 OTI C35 C25 C 0 1 Y N N 26.687 15.625 -42.534 -4.142 -2.607 -0.727 C35 OTI 35 OTI C36 C26 C 0 1 N N N 25.928 15.130 -41.305 -4.566 -3.310 0.536 C36 OTI 36 OTI F37 F1 F 0 1 N N N 26.249 17.848 -41.835 -4.302 -4.640 -1.934 F37 OTI 37 OTI C38 C27 C 0 1 N N N 24.982 12.956 -44.649 -2.248 -1.689 1.966 C38 OTI 38 OTI O39 O4 O 0 1 N N N 24.235 12.708 -45.596 -2.681 -1.938 3.076 O39 OTI 39 OTI O40 O5 O 0 1 N N N 24.434 13.505 -43.539 -1.381 -2.537 1.374 O40 OTI 40 OTI C41 C28 C 0 1 N N N 23.082 13.886 -43.511 -1.100 -3.760 2.059 C41 OTI 41 OTI C42 C29 C 0 1 N N N 22.972 15.325 -43.913 -0.024 -4.536 1.296 C42 OTI 42 OTI H1 H1 H 0 1 N N N 26.650 8.981 -50.938 4.851 2.044 1.207 H1 OTI 43 OTI H2 H2 H 0 1 N N N 28.282 8.697 -51.633 4.300 0.681 2.231 H2 OTI 44 OTI H3 H3 H 0 1 N N N 27.602 9.963 -54.152 6.704 -0.283 1.402 H3 OTI 45 OTI H4 H4 H 0 1 N N N 26.579 11.414 -53.878 6.451 -1.315 -0.026 H4 OTI 46 OTI H5 H5 H 0 1 N N N 24.261 9.161 -55.486 7.459 2.081 1.116 H5 OTI 47 OTI H6 H6 H 0 1 N N N 24.950 10.819 -55.478 7.744 2.734 -0.515 H6 OTI 48 OTI H7 H7 H 0 1 N N N 25.980 9.421 -55.935 6.085 2.389 0.029 H7 OTI 49 OTI H8 H8 H 0 1 N N N 25.694 12.023 -47.189 -0.417 -0.445 2.525 H8 OTI 50 OTI H9 H9 H 0 1 N N N 26.120 10.418 -46.504 -0.462 1.321 2.742 H9 OTI 51 OTI H10 H10 H 0 1 N N N 33.160 10.176 -45.317 -3.470 6.383 -0.372 H10 OTI 52 OTI H11 H11 H 0 1 N N N 33.970 11.694 -43.429 -5.938 6.091 -0.892 H11 OTI 53 OTI H12 H12 H 0 1 N N N 28.374 14.698 -45.309 -3.260 0.450 -1.846 H12 OTI 54 OTI H13 H13 H 0 1 N N N 28.632 17.113 -45.559 -3.069 -0.808 -3.953 H13 OTI 55 OTI H14 H14 H 0 1 N N N 27.550 18.695 -43.908 -3.563 -3.220 -3.997 H14 OTI 56 OTI H15 H15 H 0 1 N N N 29.142 9.597 -49.628 2.734 2.247 0.278 H15 OTI 57 OTI H16 H16 H 0 1 N N N 26.257 10.652 -49.346 2.162 -0.078 2.195 H16 OTI 58 OTI H17 H17 H 0 1 N N N 27.015 9.320 -48.409 1.776 1.644 2.450 H17 OTI 59 OTI H19 H19 H 0 1 N N N 28.331 13.169 -47.588 0.890 -1.373 0.625 H19 OTI 60 OTI H20 H20 H 0 1 N N N 27.081 13.010 -48.869 -0.408 -0.609 -0.322 H20 OTI 61 OTI H21 H21 H 0 1 N N N 29.942 11.900 -48.992 1.734 -1.085 -1.635 H21 OTI 62 OTI H22 H22 H 0 1 N N N 29.312 13.322 -49.891 1.208 0.621 -1.670 H22 OTI 63 OTI H23 H23 H 0 1 N N N 24.701 9.898 -51.859 7.388 1.285 -2.520 H23 OTI 64 OTI H24 H24 H 0 1 N N N 24.180 11.079 -53.108 6.850 -0.399 -2.316 H24 OTI 65 OTI H25 H25 H 0 1 N N N 23.528 9.405 -53.128 5.729 0.940 -1.976 H25 OTI 66 OTI H26 H26 H 0 1 N N N 25.609 6.615 -52.554 10.533 0.543 -0.984 H26 OTI 67 OTI H27 H27 H 0 1 N N N 26.628 15.009 -40.465 -5.644 -3.211 0.663 H27 OTI 68 OTI H28 H28 H 0 1 N N N 25.153 15.862 -41.034 -4.304 -4.366 0.470 H28 OTI 69 OTI H29 H29 H 0 1 N N N 25.456 14.162 -41.531 -4.057 -2.863 1.390 H29 OTI 70 OTI H30 H30 H 0 1 N N N 22.683 13.756 -42.494 -0.744 -3.539 3.065 H30 OTI 71 OTI H31 H31 H 0 1 N N N 22.509 13.262 -44.213 -2.008 -4.360 2.118 H31 OTI 72 OTI H32 H32 H 0 1 N N N 21.916 15.632 -43.894 0.910 -3.974 1.312 H32 OTI 73 OTI H33 H33 H 0 1 N N N 23.547 15.947 -43.211 0.127 -5.506 1.768 H33 OTI 74 OTI H34 H34 H 0 1 N N N 23.373 15.453 -44.929 -0.343 -4.680 0.264 H34 OTI 75 OTI H18 H18 H 0 1 N N N 26.615 12.996 -42.486 -4.731 -0.953 1.216 H18 OTI 76 OTI H35 H35 H 0 1 N N N 28.955 11.221 -46.101 -1.583 2.395 0.441 H35 OTI 77 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OTI C14 C12 SING N N 1 OTI O16 C15 DOUB N N 2 OTI C12 C11 SING N N 3 OTI C12 C15 SING N N 4 OTI C12 C13 SING N N 5 OTI C11 N09 SING N N 6 OTI C15 O17 SING N N 7 OTI O08 C07 DOUB N N 8 OTI N09 C07 SING N N 9 OTI N09 C10 SING N N 10 OTI C07 N06 SING N N 11 OTI C10 C01 SING N N 12 OTI N06 C01 SING N N 13 OTI N06 C05 SING N N 14 OTI C01 C02 SING N N 15 OTI C05 C04 SING N N 16 OTI C02 N03 SING N N 17 OTI C04 N03 SING N N 18 OTI N03 C18 SING N N 19 OTI C18 C19 SING N N 20 OTI C19 N24 SING N N 21 OTI C19 C20 DOUB N N 22 OTI O39 C38 DOUB N N 23 OTI N24 C23 SING N N 24 OTI N26 C27 SING Y N 25 OTI N26 C25 DOUB Y N 26 OTI C27 C28 DOUB Y N 27 OTI C32 C31 DOUB Y N 28 OTI C32 C33 SING Y N 29 OTI C38 C20 SING N N 30 OTI C38 O40 SING N N 31 OTI C20 C21 SING N N 32 OTI C31 C30 SING Y N 33 OTI C23 C25 SING N N 34 OTI C23 N22 DOUB N N 35 OTI C25 S29 SING Y N 36 OTI C42 C41 SING N N 37 OTI C33 C34 DOUB Y N 38 OTI C28 S29 SING Y N 39 OTI O40 C41 SING N N 40 OTI C30 C21 SING N N 41 OTI C30 C35 DOUB Y N 42 OTI C21 N22 SING N N 43 OTI C34 C35 SING Y N 44 OTI C34 F37 SING N N 45 OTI C35 C36 SING N N 46 OTI C10 H1 SING N N 47 OTI C10 H2 SING N N 48 OTI C11 H3 SING N N 49 OTI C11 H4 SING N N 50 OTI C14 H5 SING N N 51 OTI C14 H6 SING N N 52 OTI C14 H7 SING N N 53 OTI C18 H8 SING N N 54 OTI C18 H9 SING N N 55 OTI C27 H10 SING N N 56 OTI C28 H11 SING N N 57 OTI C31 H12 SING N N 58 OTI C32 H13 SING N N 59 OTI C33 H14 SING N N 60 OTI C01 H15 SING N N 61 OTI C02 H16 SING N N 62 OTI C02 H17 SING N N 63 OTI C04 H19 SING N N 64 OTI C04 H20 SING N N 65 OTI C05 H21 SING N N 66 OTI C05 H22 SING N N 67 OTI C13 H23 SING N N 68 OTI C13 H24 SING N N 69 OTI C13 H25 SING N N 70 OTI O17 H26 SING N N 71 OTI C36 H27 SING N N 72 OTI C36 H28 SING N N 73 OTI C36 H29 SING N N 74 OTI C41 H30 SING N N 75 OTI C41 H31 SING N N 76 OTI C42 H32 SING N N 77 OTI C42 H33 SING N N 78 OTI C42 H34 SING N N 79 OTI C21 H18 SING N N 80 OTI N24 H35 SING N N 81 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OTI InChI InChI 1.06 "InChI=1S/C29H35FN6O5S/c1-5-41-26(37)22-21(15-34-10-11-36-18(13-34)14-35(28(36)40)16-29(3,4)27(38)39)32-24(25-31-9-12-42-25)33-23(22)19-7-6-8-20(30)17(19)2/h6-9,12,18,23H,5,10-11,13-16H2,1-4H3,(H,32,33)(H,38,39)/t18-,23?/m0/s1" OTI InChIKey InChI 1.06 YLJBFYZGSKMBEZ-XNUZUHMRSA-N OTI SMILES_CANONICAL CACTVS 3.385 "CCOC(=O)C1=C(CN2CCN3[C@@H](C2)CN(CC(C)(C)C(O)=O)C3=O)NC(=N[C@H]1c4cccc(F)c4C)c5sccn5" OTI SMILES CACTVS 3.385 "CCOC(=O)C1=C(CN2CCN3[CH](C2)CN(CC(C)(C)C(O)=O)C3=O)NC(=N[CH]1c4cccc(F)c4C)c5sccn5" OTI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C1=C(NC(=NC1c2cccc(c2C)F)c3nccs3)CN4CCN5[C@@H](C4)CN(C5=O)CC(C)(C)C(=O)O" OTI SMILES "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C1=C(NC(=NC1c2cccc(c2C)F)c3nccs3)CN4CCN5C(C4)CN(C5=O)CC(C)(C)C(=O)O" # _pdbx_chem_comp_identifier.comp_id OTI _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "3-[(8~{a}~{S})-7-[[5-ethoxycarbonyl-4-(3-fluoranyl-2-methyl-phenyl)-2-(1,3-thiazol-2-yl)-1,4-dihydropyrimidin-6-yl]methyl]-3-oxidanylidene-5,6,8,8~{a}-tetrahydro-1~{H}-imidazo[1,5-a]pyrazin-2-yl]-2,2-dimethyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OTI "Create component" 2023-02-10 PDBJ OTI "Initial release" 2023-03-22 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OTI _pdbx_chem_comp_synonyms.name Linvencorvir _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #