data_OV8 # _chem_comp.id OV8 _chem_comp.name "[(2~{R},3~{S},4~{S},5~{R})-5-[3-[4-(aminomethyl)-1,2,3-triazol-1-yl]propyl]-3,4-bis(oxidanyl)oxan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-4-methyl-pentanoyl]sulfamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H34 N6 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-06 _chem_comp.pdbx_modified_date 2020-11-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 478.564 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OV8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6YKN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OV8 C13 C1 C 0 1 Y N N -7.666 -4.194 -22.841 -5.933 -1.995 -0.385 C13 OV8 1 OV8 N N1 N 0 1 N N N 0.142 -1.444 -28.836 1.237 -3.347 -0.940 N OV8 2 OV8 CA C2 C 0 1 N N S -1.015 -0.541 -28.770 2.297 -2.870 -0.042 CA OV8 3 OV8 C C3 C 0 1 N N N -2.222 -1.237 -28.156 2.849 -1.568 -0.563 C OV8 4 OV8 O O1 O 0 1 N N N -3.212 -0.597 -27.811 2.688 -1.263 -1.726 O OV8 5 OV8 CB C4 C 0 1 N N N -1.383 0.005 -30.152 3.418 -3.909 0.022 CB OV8 6 OV8 CG C5 C 0 1 N N N -0.487 1.171 -30.552 2.877 -5.206 0.628 CG OV8 7 OV8 CD1 C6 C 0 1 N N N -0.640 2.334 -29.586 3.954 -6.290 0.558 CD1 OV8 8 OV8 CD2 C7 C 0 1 N N N -0.777 1.616 -31.975 2.490 -4.964 2.088 CD2 OV8 9 OV8 C1 C8 C 0 1 N N N -7.060 -4.683 -29.780 -0.999 2.816 -1.316 C1 OV8 10 OV8 C14 C9 C 0 1 Y N N -8.489 -4.080 -23.920 -4.832 -1.638 0.317 C14 OV8 11 OV8 C15 C10 C 0 1 N N N -7.867 -4.928 -21.544 -6.354 -3.396 -0.749 C15 OV8 12 OV8 C2 C11 C 0 1 N N R -7.864 -3.416 -29.583 -1.760 3.517 -0.188 C2 OV8 13 OV8 C3 C12 C 0 1 N N S -6.892 -2.259 -29.347 -0.808 4.469 0.544 C3 OV8 14 OV8 C4 C13 C 0 1 N N S -5.821 -2.170 -30.432 0.395 3.673 1.061 C4 OV8 15 OV8 C5 C14 C 0 1 N N R -5.206 -3.532 -30.764 1.072 2.966 -0.116 C5 OV8 16 OV8 C6 C15 C 0 1 N N N -4.134 -4.023 -29.815 2.239 2.121 0.399 C6 OV8 17 OV8 C7 C16 C 0 1 N N N -8.904 -3.591 -28.470 -2.294 2.473 0.795 C7 OV8 18 OV8 C8 C17 C 0 1 N N N -8.348 -4.007 -27.111 -3.332 1.596 0.092 C8 OV8 19 OV8 C9 C18 C 0 1 N N N -8.242 -2.863 -26.116 -3.867 0.552 1.074 C9 OV8 20 OV8 N10 N2 N 0 1 Y N N -7.817 -3.311 -24.793 -4.861 -0.287 0.401 N10 OV8 21 OV8 N11 N3 N 0 1 Y N N -6.622 -2.956 -24.294 -5.912 0.132 -0.212 N11 OV8 22 OV8 N12 N4 N 0 1 Y N N -6.530 -3.495 -23.101 -6.576 -0.862 -0.687 N12 OV8 23 OV8 N16 N5 N 0 1 N N N -8.686 -6.131 -21.639 -7.308 -3.895 0.249 N16 OV8 24 OV8 N3S N6 N 0 1 N N N -2.122 -2.589 -28.018 3.522 -0.742 0.263 N3S OV8 25 OV8 O1S O2 O 0 1 N N N -3.752 -2.985 -26.227 4.744 1.335 0.795 O1S OV8 26 OV8 O2S O3 O 0 1 N N N -2.713 -4.890 -27.416 4.820 0.378 -1.512 O2S OV8 27 OV8 O3 O4 O 0 1 N N N -7.609 -1.032 -29.273 -0.359 5.483 -0.357 O3 OV8 28 OV8 O4 O5 O 0 1 N N N -6.383 -1.616 -31.617 1.324 4.562 1.683 O4 OV8 29 OV8 O5 O6 O 0 1 N N N -6.191 -4.562 -30.910 0.124 2.121 -0.772 O5 OV8 30 OV8 O6 O7 O 0 1 N N N -4.430 -3.561 -28.463 2.941 1.554 -0.708 O6 OV8 31 OV8 S S1 S 0 1 N N N -3.231 -3.568 -27.413 4.129 0.688 -0.310 S OV8 32 OV8 H1 H1 H 0 1 N N N 0.355 -1.781 -27.919 0.457 -2.708 -0.949 H1 OV8 33 OV8 H2 H2 H 0 1 N N N -0.072 -2.216 -29.434 1.593 -3.497 -1.872 H2 OV8 34 OV8 H4 H4 H 0 1 N N N -0.756 0.314 -28.129 1.887 -2.717 0.956 H4 OV8 35 OV8 H5 H5 H 0 1 N N N -2.428 0.348 -30.134 3.789 -4.106 -0.984 H5 OV8 36 OV8 H6 H6 H 0 1 N N N -1.274 -0.800 -30.894 4.231 -3.530 0.642 H6 OV8 37 OV8 H7 H7 H 0 1 N N N 0.557 0.827 -30.509 1.999 -5.530 0.068 H7 OV8 38 OV8 H8 H8 H 0 1 N N N -0.426 1.992 -28.563 4.849 -5.947 1.078 H8 OV8 39 OV8 H9 H9 H 0 1 N N N 0.064 3.133 -29.860 3.585 -7.200 1.031 H9 OV8 40 OV8 H10 H10 H 0 1 N N N -1.669 2.719 -29.636 4.197 -6.495 -0.485 H10 OV8 41 OV8 H11 H11 H 0 1 N N N -0.118 2.457 -32.238 1.723 -4.192 2.138 H11 OV8 42 OV8 H12 H12 H 0 1 N N N -0.596 0.779 -32.665 2.105 -5.888 2.520 H12 OV8 43 OV8 H13 H13 H 0 1 N N N -1.827 1.935 -32.053 3.368 -4.641 2.648 H13 OV8 44 OV8 H14 H14 H 0 1 N N N -7.748 -5.525 -29.943 -1.660 2.106 -1.813 H14 OV8 45 OV8 H15 H15 H 0 1 N N N -6.457 -4.871 -28.880 -0.654 3.557 -2.037 H15 OV8 46 OV8 H16 H16 H 0 1 N N N -9.470 -4.514 -24.047 -4.082 -2.297 0.728 H16 OV8 47 OV8 H17 H17 H 0 1 N N N -6.878 -5.217 -21.159 -6.826 -3.389 -1.732 H17 OV8 48 OV8 H18 H18 H 0 1 N N N -8.350 -4.241 -20.834 -5.478 -4.044 -0.772 H18 OV8 49 OV8 H19 H19 H 0 1 N N N -8.407 -3.211 -30.518 -2.591 4.084 -0.606 H19 OV8 50 OV8 H20 H20 H 0 1 N N N -6.384 -2.438 -28.388 -1.328 4.931 1.383 H20 OV8 51 OV8 H21 H21 H 0 1 N N N -5.018 -1.514 -30.066 0.058 2.932 1.786 H21 OV8 52 OV8 H22 H22 H 0 1 N N N -4.717 -3.412 -31.742 1.445 3.709 -0.821 H22 OV8 53 OV8 H23 H23 H 0 1 N N N -4.108 -5.123 -29.829 2.916 2.750 0.976 H23 OV8 54 OV8 H24 H24 H 0 1 N N N -3.157 -3.629 -30.131 1.856 1.321 1.034 H24 OV8 55 OV8 H25 H25 H 0 1 N N N -9.429 -2.633 -28.343 -1.471 1.851 1.147 H25 OV8 56 OV8 H26 H26 H 0 1 N N N -9.620 -4.361 -28.793 -2.758 2.976 1.643 H26 OV8 57 OV8 H27 H27 H 0 1 N N N -9.010 -4.776 -26.686 -4.155 2.219 -0.260 H27 OV8 58 OV8 H28 H28 H 0 1 N N N -7.344 -4.430 -27.262 -2.869 1.093 -0.756 H28 OV8 59 OV8 H29 H29 H 0 1 N N N -7.510 -2.134 -26.494 -3.044 -0.070 1.426 H29 OV8 60 OV8 H30 H30 H 0 1 N N N -9.227 -2.381 -26.026 -4.331 1.055 1.923 H30 OV8 61 OV8 H31 H31 H 0 1 N N N -8.766 -6.552 -20.736 -8.100 -3.275 0.335 H31 OV8 62 OV8 H32 H32 H 0 1 N N N -9.596 -5.889 -21.976 -7.606 -4.833 0.027 H32 OV8 63 OV8 H34 H34 H 0 1 N N N -1.269 -3.011 -28.326 3.652 -0.986 1.192 H34 OV8 64 OV8 H35 H35 H 0 1 N N N -8.273 -1.093 -28.597 0.248 6.122 0.041 H35 OV8 65 OV8 H36 H36 H 0 1 N N N -6.767 -0.770 -31.420 2.112 4.125 2.034 H36 OV8 66 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OV8 CD2 CG SING N N 1 OV8 O4 C4 SING N N 2 OV8 O5 C5 SING N N 3 OV8 O5 C1 SING N N 4 OV8 C5 C4 SING N N 5 OV8 C5 C6 SING N N 6 OV8 CG CB SING N N 7 OV8 CG CD1 SING N N 8 OV8 C4 C3 SING N N 9 OV8 CB CA SING N N 10 OV8 C6 O6 SING N N 11 OV8 C1 C2 SING N N 12 OV8 C2 C3 SING N N 13 OV8 C2 C7 SING N N 14 OV8 C3 O3 SING N N 15 OV8 N CA SING N N 16 OV8 CA C SING N N 17 OV8 C7 C8 SING N N 18 OV8 O6 S SING N N 19 OV8 C N3S SING N N 20 OV8 C O DOUB N N 21 OV8 N3S S SING N N 22 OV8 O2S S DOUB N N 23 OV8 S O1S DOUB N N 24 OV8 C8 C9 SING N N 25 OV8 C9 N10 SING N N 26 OV8 N10 N11 SING Y N 27 OV8 N10 C14 SING Y N 28 OV8 N11 N12 DOUB Y N 29 OV8 C14 C13 DOUB Y N 30 OV8 N12 C13 SING Y N 31 OV8 C13 C15 SING N N 32 OV8 N16 C15 SING N N 33 OV8 N H1 SING N N 34 OV8 N H2 SING N N 35 OV8 CA H4 SING N N 36 OV8 CB H5 SING N N 37 OV8 CB H6 SING N N 38 OV8 CG H7 SING N N 39 OV8 CD1 H8 SING N N 40 OV8 CD1 H9 SING N N 41 OV8 CD1 H10 SING N N 42 OV8 CD2 H11 SING N N 43 OV8 CD2 H12 SING N N 44 OV8 CD2 H13 SING N N 45 OV8 C1 H14 SING N N 46 OV8 C1 H15 SING N N 47 OV8 C14 H16 SING N N 48 OV8 C15 H17 SING N N 49 OV8 C15 H18 SING N N 50 OV8 C2 H19 SING N N 51 OV8 C3 H20 SING N N 52 OV8 C4 H21 SING N N 53 OV8 C5 H22 SING N N 54 OV8 C6 H23 SING N N 55 OV8 C6 H24 SING N N 56 OV8 C7 H25 SING N N 57 OV8 C7 H26 SING N N 58 OV8 C8 H27 SING N N 59 OV8 C8 H28 SING N N 60 OV8 C9 H29 SING N N 61 OV8 C9 H30 SING N N 62 OV8 N16 H31 SING N N 63 OV8 N16 H32 SING N N 64 OV8 N3S H34 SING N N 65 OV8 O3 H35 SING N N 66 OV8 O4 H36 SING N N 67 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OV8 InChI InChI 1.03 "InChI=1S/C18H34N6O7S/c1-11(2)6-14(20)18(27)22-32(28,29)31-10-15-17(26)16(25)12(9-30-15)4-3-5-24-8-13(7-19)21-23-24/h8,11-12,14-17,25-26H,3-7,9-10,19-20H2,1-2H3,(H,22,27)/t12-,14+,15-,16+,17-/m1/s1" OV8 InChIKey InChI 1.03 CBXGRYCGMRFRFP-LMLQULGWSA-N OV8 SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](N)C(=O)N[S](=O)(=O)OC[C@H]1OC[C@@H](CCCn2cc(CN)nn2)[C@H](O)[C@@H]1O" OV8 SMILES CACTVS 3.385 "CC(C)C[CH](N)C(=O)N[S](=O)(=O)OC[CH]1OC[CH](CCCn2cc(CN)nn2)[CH](O)[CH]1O" OV8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)NS(=O)(=O)OC[C@@H]1[C@H]([C@H]([C@@H](CO1)CCCn2cc(nn2)CN)O)O)N" OV8 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NS(=O)(=O)OCC1C(C(C(CO1)CCCn2cc(nn2)CN)O)O)N" # _pdbx_chem_comp_identifier.comp_id OV8 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(2~{R},3~{S},4~{S},5~{R})-5-[3-[4-(aminomethyl)-1,2,3-triazol-1-yl]propyl]-3,4-bis(oxidanyl)oxan-2-yl]methyl ~{N}-[(2~{S})-2-azanyl-4-methyl-pentanoyl]sulfamate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OV8 "Create component" 2020-04-06 PDBE OV8 "Initial release" 2020-12-02 RCSB ##