data_OVA # _chem_comp.id OVA _chem_comp.name "3,4-DIHYDROXY-2-METHOXY-4-METHYL-3-[2-METHYL-3-(3-METHYL-BUT-2-ENYL) -OXIRANYL]-CYCLOHEXANONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H26 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms OVALICIN _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-23 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 298.375 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OVA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1B59 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OVA C5 C5 C 0 1 N N N N N N 17.670 27.431 20.974 -1.210 -0.045 3.799 C5 OVA 1 OVA C4 C4 C 0 1 N N N N N N 16.218 27.881 20.958 0.234 -0.334 3.459 C4 OVA 2 OVA C3 C3 C 0 1 N N S N N N 15.771 28.443 19.594 0.783 0.193 2.152 C3 OVA 3 OVA C2 C2 C 0 1 N N R N N N 16.708 29.626 19.226 -0.160 -0.223 1.019 C2 OVA 4 OVA C1 C1 C 0 1 N N R N N N 18.160 29.156 19.137 -1.581 0.241 1.345 C1 OVA 5 OVA C6 C6 C 0 1 N N N N N N 18.588 28.572 20.475 -2.083 -0.457 2.609 C6 OVA 6 OVA O11 O11 O 0 1 N N N N N N 18.225 28.137 18.229 -1.577 1.655 1.553 O11 OVA 7 OVA C11 C11 C 0 1 N N N N N N 19.205 30.203 18.678 -2.507 -0.096 0.175 C11 OVA 8 OVA C21 C21 C 0 1 N N S N N N 16.214 30.212 17.892 0.296 0.414 -0.294 C21 OVA 9 OVA C22 C22 C 0 1 N N R N N N 16.378 31.735 17.716 -0.101 -0.278 -1.599 C22 OVA 10 OVA C23 C23 C 0 1 N N N N N N 16.504 32.305 16.303 -0.383 0.602 -2.817 C23 OVA 11 OVA C24 C24 C 0 1 N N N N N N 17.890 31.991 15.723 -0.693 -0.270 -4.007 C24 OVA 12 OVA C25 C25 C 0 1 N N N N N N 18.996 32.729 15.696 0.088 -0.245 -5.058 C25 OVA 13 OVA C2A C2A C 0 1 N N N N N N 15.937 29.379 16.649 0.384 1.941 -0.295 C2A OVA 14 OVA O2A O2A O 0 1 N N N N N N 15.151 31.184 18.015 1.236 -0.307 -1.092 O2A OVA 15 OVA C2B C2B C 0 1 N N N N N N 20.294 32.099 15.237 -0.325 -0.956 -6.321 C2B OVA 16 OVA C2C C2C C 0 1 N N N N N N 19.128 34.093 16.352 1.400 0.492 -5.004 C2C OVA 17 OVA O31 O31 O 0 1 N N N N N N 14.427 28.928 19.636 2.082 -0.354 1.921 O31 OVA 18 OVA C31 C31 C 0 1 N N N N N N 13.483 27.866 19.548 3.021 0.547 2.509 C31 OVA 19 OVA O41 O41 O 0 1 N N N N N N 15.490 27.836 21.915 0.932 -0.970 4.212 O41 OVA 20 OVA O1 O1 O 0 1 N N N N N N 16.522 30.538 20.196 -0.142 -1.646 0.890 O1 OVA 21 OVA H51 1H5 H 0 1 N N N N N N 17.979 27.056 21.977 -1.500 -0.616 4.681 H51 OVA 22 OVA H52 2H5 H 0 1 N N N N N N 17.821 26.490 20.394 -1.335 1.020 3.993 H52 OVA 23 OVA H3 H3 H 0 1 N N N N N N 15.823 27.623 18.839 0.846 1.281 2.194 H3 OVA 24 OVA H61 1H6 H 0 1 N N N N N N 18.675 29.373 21.245 -2.027 -1.537 2.474 H61 OVA 25 OVA H62 2H6 H 0 1 N N N N N N 19.650 28.235 20.436 -3.117 -0.167 2.798 H62 OVA 26 OVA H12 H12 H 0 1 N N N N N N 19.127 27.844 18.173 -2.488 1.911 1.749 H12 OVA 27 OVA H111 1H11 H 0 0 N N N N N N 20.264 29.860 18.613 -3.537 0.127 0.450 H111 OVA 28 OVA H112 2H11 H 0 0 N N N N N N 18.892 30.638 17.700 -2.226 0.497 -0.694 H112 OVA 29 OVA H113 3H11 H 0 0 N N N N N N 19.143 31.103 19.332 -2.417 -1.156 -0.064 H113 OVA 30 OVA H22 H22 H 0 1 N N N N N N 17.062 32.494 18.160 -0.690 -1.192 -1.529 H22 OVA 31 OVA H231 1H23 H 0 0 N N N N N N 15.684 31.949 15.636 -1.236 1.248 -2.609 H231 OVA 32 OVA H232 2H23 H 0 0 N N N N N N 16.278 33.396 16.273 0.492 1.214 -3.034 H232 OVA 33 OVA H24 H24 H 0 1 N N N N N N 18.142 31.040 15.223 -1.559 -0.915 -3.992 H24 OVA 34 OVA HA1 1HA H 0 1 N N N N N N 15.579 29.803 15.682 0.848 2.277 -1.222 HA1 OVA 35 OVA HA2 2HA H 0 1 N N N N N N 16.864 28.800 16.429 -0.617 2.363 -0.217 HA2 OVA 36 OVA HA3 3HA H 0 1 N N N N N N 15.216 28.581 16.943 0.984 2.271 0.552 HA3 OVA 37 OVA HB1 1HB H 0 1 N N N N N N 21.221 32.717 15.214 0.445 -0.826 -7.080 HB1 OVA 38 OVA HB2 2HB H 0 1 N N N N N N 20.486 31.188 15.851 -0.456 -2.018 -6.114 HB2 OVA 39 OVA HB3 3HB H 0 1 N N N N N N 20.137 31.652 14.227 -1.265 -0.538 -6.681 HB3 OVA 40 OVA HC1 1HC H 0 1 N N N N N N 20.055 34.711 16.329 1.578 0.843 -3.988 HC1 OVA 41 OVA HC2 2HC H 0 1 N N N N N N 18.302 34.727 15.953 2.206 -0.177 -5.304 HC2 OVA 42 OVA HC3 3HC H 0 1 N N N N N N 18.845 33.968 17.423 1.365 1.345 -5.682 HC3 OVA 43 OVA H11 1H1 H 0 1 N N N N N N 12.434 28.244 19.580 4.032 0.169 2.357 H11 OVA 44 OVA H12A 2H1 H 0 0 N N N N N N 13.660 27.237 18.644 2.926 1.527 2.042 H12A OVA 45 OVA H13 3H1 H 0 1 N N N N N N 13.662 27.095 20.333 2.822 0.633 3.577 H13 OVA 46 OVA HO1 HO1 H 0 1 N N N N N N 17.095 31.261 19.970 -0.436 -2.007 1.738 HO1 OVA 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OVA C5 C4 SING N N 1 OVA C5 C6 SING N N 2 OVA C5 H51 SING N N 3 OVA C5 H52 SING N N 4 OVA C4 C3 SING N N 5 OVA C4 O41 DOUB N N 6 OVA C3 C2 SING N N 7 OVA C3 O31 SING N N 8 OVA C3 H3 SING N N 9 OVA C2 C1 SING N N 10 OVA C2 C21 SING N N 11 OVA C2 O1 SING N N 12 OVA C1 C6 SING N N 13 OVA C1 O11 SING N N 14 OVA C1 C11 SING N N 15 OVA C6 H61 SING N N 16 OVA C6 H62 SING N N 17 OVA O11 H12 SING N N 18 OVA C11 H111 SING N N 19 OVA C11 H112 SING N N 20 OVA C11 H113 SING N N 21 OVA C21 C22 SING N N 22 OVA C21 C2A SING N N 23 OVA C21 O2A SING N N 24 OVA C22 C23 SING N N 25 OVA C22 O2A SING N N 26 OVA C22 H22 SING N N 27 OVA C23 C24 SING N N 28 OVA C23 H231 SING N N 29 OVA C23 H232 SING N N 30 OVA C24 C25 DOUB N N 31 OVA C24 H24 SING N N 32 OVA C25 C2B SING N N 33 OVA C25 C2C SING N N 34 OVA C2A HA1 SING N N 35 OVA C2A HA2 SING N N 36 OVA C2A HA3 SING N N 37 OVA C2B HB1 SING N N 38 OVA C2B HB2 SING N N 39 OVA C2B HB3 SING N N 40 OVA C2C HC1 SING N N 41 OVA C2C HC2 SING N N 42 OVA C2C HC3 SING N N 43 OVA O31 C31 SING N N 44 OVA C31 H11 SING N N 45 OVA C31 H12A SING N N 46 OVA C31 H13 SING N N 47 OVA O1 HO1 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OVA SMILES ACDLabs 10.04 "O=C2C(OC)C(O)(C1(OC1C/C=C(/C)C)C)C(O)(C)CC2" OVA SMILES_CANONICAL CACTVS 3.341 "CO[C@@H]1C(=O)CC[C@@](C)(O)[C@@]1(O)[C@@]2(C)O[C@@H]2CC=C(C)C" OVA SMILES CACTVS 3.341 "CO[CH]1C(=O)CC[C](C)(O)[C]1(O)[C]2(C)O[CH]2CC=C(C)C" OVA SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC(=CC[C@@H]1[C@@](O1)(C)[C@]2([C@@H](C(=O)CC[C@@]2(C)O)OC)O)C" OVA SMILES "OpenEye OEToolkits" 1.5.0 "CC(=CCC1C(O1)(C)C2(C(C(=O)CCC2(C)O)OC)O)C" OVA InChI InChI 1.03 "InChI=1S/C16H26O5/c1-10(2)6-7-12-15(4,21-12)16(19)13(20-5)11(17)8-9-14(16,3)18/h6,12-13,18-19H,7-9H2,1-5H3/t12-,13-,14-,15+,16-/m1/s1" OVA InChIKey InChI 1.03 UOXVFQCRPDLSFN-DGXTUMSLSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OVA "SYSTEMATIC NAME" ACDLabs 10.04 "(2S,3R,4R)-3,4-dihydroxy-2-methoxy-4-methyl-3-[(2S,3R)-2-methyl-3-(3-methylbut-2-en-1-yl)oxiran-2-yl]cyclohexanone" OVA "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2S,3R,4R)-3,4-dihydroxy-2-methoxy-4-methyl-3-[(2S,3R)-2-methyl-3-(3-methylbut-2-enyl)oxiran-2-yl]cyclohexan-1-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OVA "Create component" 1999-07-23 RCSB OVA "Modify descriptor" 2011-06-04 RCSB OVA "Modify synonyms" 2020-06-05 PDBE OVA "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OVA _pdbx_chem_comp_synonyms.name OVALICIN _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id OVA _pdbx_chem_comp_pcm.modified_residue_id HIS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C11 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom NE2 _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #