data_OWF # _chem_comp.id OWF _chem_comp.name "(3S)-3-hydroxy-D-asparagine" _chem_comp.type "D-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C4 H8 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-05-18 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 148.117 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OWF _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CUG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OWF N N N 0 1 N N N Y Y N 4.845 18.795 8.567 -0.241 1.816 0.376 N OWF 1 OWF CA CA C 0 1 N N R Y N N 3.732 17.953 8.170 -0.461 0.366 0.465 CA OWF 2 OWF C C C 0 1 N N N Y N Y 2.380 18.633 8.359 -1.880 0.049 0.068 C OWF 3 OWF O O O 0 1 N N N Y N Y 1.397 18.107 7.879 -2.515 0.840 -0.587 O OWF 4 OWF CB CB C 0 1 N N S N N N 3.890 17.562 6.705 0.506 -0.356 -0.475 CB OWF 5 OWF OB1 OB1 O 0 1 N N N N N N 3.501 18.658 5.927 0.292 -1.766 -0.388 OB1 OWF 6 OWF CG CG C 0 1 N N N N N N 2.980 16.409 6.278 1.924 -0.038 -0.078 CG OWF 7 OWF OD1 OD1 O 0 1 N N N N N N 2.159 16.472 5.395 2.651 -0.918 0.334 OD1 OWF 8 OWF ND2 ND2 N 0 1 N N N N N N 3.176 15.190 6.979 2.386 1.224 -0.181 ND2 OWF 9 OWF OXT OXT O 0 1 N Y N Y N Y 2.367 19.781 9.026 -2.437 -1.114 0.442 OXT OWF 10 OWF H H1 H 0 1 N N N Y Y N 4.743 19.052 9.528 -0.395 2.148 -0.564 H1 OWF 11 OWF H2 H2 H 0 1 N Y N Y Y N 5.702 18.294 8.446 -0.822 2.312 1.035 H2 OWF 12 OWF HA HA H 0 1 N N N Y N N 3.741 17.034 8.774 -0.287 0.035 1.489 HA OWF 13 OWF HB1 HB1 H 0 1 N N N N N N 4.938 17.289 6.511 0.332 -0.024 -1.499 HB1 OWF 14 OWF H3 H3 H 0 1 N Y N N N N 2.805 18.396 5.336 0.429 -2.130 0.497 H3 OWF 15 OWF HD22 HD22 H 0 0 N N N N N N 2.634 14.384 6.741 1.806 1.928 -0.511 HD22 OWF 16 OWF HD21 HD21 H 0 0 N N N N N N 3.856 15.138 7.710 3.299 1.429 0.075 HD21 OWF 17 OWF HXT H4 H 0 1 N Y N Y N Y 1.479 20.115 9.064 -3.349 -1.273 0.164 H4 OWF 18 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OWF OD1 CG DOUB N N 1 OWF OB1 CB SING N N 2 OWF CG CB SING N N 3 OWF CG ND2 SING N N 4 OWF CB CA SING N N 5 OWF O C DOUB N N 6 OWF CA C SING N N 7 OWF CA N SING N N 8 OWF C OXT SING N N 9 OWF N H SING N N 10 OWF N H2 SING N N 11 OWF CA HA SING N N 12 OWF CB HB1 SING N N 13 OWF OB1 H3 SING N N 14 OWF ND2 HD22 SING N N 15 OWF ND2 HD21 SING N N 16 OWF OXT HXT SING N N 17 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OWF SMILES ACDLabs 12.01 "NC(=O)C(O)C(N)C(O)=O" OWF InChI InChI 1.03 "InChI=1S/C4H8N2O4/c5-1(4(9)10)2(7)3(6)8/h1-2,7H,5H2,(H2,6,8)(H,9,10)/t1-,2+/m1/s1" OWF InChIKey InChI 1.03 VQTLPSCRBFYDNX-NCGGTJAESA-N OWF SMILES_CANONICAL CACTVS 3.385 "N[C@H]([C@H](O)C(N)=O)C(O)=O" OWF SMILES CACTVS 3.385 "N[CH]([CH](O)C(N)=O)C(O)=O" OWF SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[C@@H]([C@@H](C(=O)N)O)(C(=O)O)N" OWF SMILES "OpenEye OEToolkits" 2.0.7 "C(C(C(=O)N)O)(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OWF "SYSTEMATIC NAME" ACDLabs 12.01 "(3S)-3-hydroxy-D-asparagine" OWF "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{S})-2,4-bis(azanyl)-3-oxidanyl-4-oxidanylidene-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OWF "Create component" 2022-05-18 RCSB OWF "Initial release" 2023-01-11 RCSB OWF "Modify backbone" 2023-11-03 PDBE OWF "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id OWF _pdbx_chem_comp_pcm.modified_residue_id DSG _pdbx_chem_comp_pcm.type Hydroxylation _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #