data_OX2 # _chem_comp.id OX2 _chem_comp.name "(1R)-1,5-anhydro-1-(5-methyl-1,3,4-oxadiazol-2-yl)-D-glucitol" _chem_comp.type D-saccharide _chem_comp.pdbx_type ATOMS _chem_comp.formula "C9 H14 N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "2-(BETA-D-GLUCOPYRANOSYL)-5-METHYL-1,3,4-OXADIAZOLE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2004-10-05 _chem_comp.pdbx_modified_date 2020-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.217 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OX2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1XL0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id OX2 _pdbx_chem_comp_synonyms.name "2-(BETA-D-GLUCOPYRANOSYL)-5-METHYL-1,3,4-OXADIAZOLE" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OX2 C1 C1 C 0 1 N N R 33.408 22.761 27.812 0.188 -0.020 -0.346 C1 OX2 1 OX2 C2 C2 C 0 1 N N R 33.778 23.014 26.310 -0.307 -1.373 0.171 C2 OX2 2 OX2 O2 O2 O 0 1 N N N 33.945 24.421 26.035 0.475 -2.421 -0.405 O2 OX2 3 OX2 C3 C3 C 0 1 N N S 32.633 22.451 25.429 -1.777 -1.552 -0.227 C3 OX2 4 OX2 O3 O3 O 0 1 N N N 32.905 22.630 24.021 -2.298 -2.740 0.373 O3 OX2 5 OX2 C4 C4 C 0 1 N N S 32.433 20.949 25.736 -2.569 -0.337 0.266 C4 OX2 6 OX2 O4 O4 O 0 1 N N N 31.330 20.413 24.967 -3.911 -0.409 -0.219 O4 OX2 7 OX2 C5 C5 C 0 1 N N R 32.161 20.756 27.254 -1.903 0.938 -0.256 C5 OX2 8 OX2 O5 O5 O 0 1 N N N 33.226 21.329 28.072 -0.573 1.030 0.248 O5 OX2 9 OX2 C6 C6 C 0 1 N N N 32.000 19.245 27.615 -2.707 2.156 0.204 C6 OX2 10 OX2 O6 O6 O 0 1 N N N 33.097 18.475 27.058 -2.160 3.338 -0.383 O6 OX2 11 OX2 N1 N1 N 0 1 Y N N 35.445 24.323 30.275 3.403 0.495 1.127 N1 OX2 12 OX2 N2 N2 N 0 1 Y N N 34.235 24.126 29.718 2.119 0.429 1.190 N2 OX2 13 OX2 C7 C7 C 0 1 Y N N 34.502 23.288 28.737 1.642 0.150 0.010 C7 OX2 14 OX2 O7 O7 O 0 1 Y N N 35.848 22.950 28.661 2.684 0.043 -0.831 O7 OX2 15 OX2 C8 C8 C 0 1 Y N N 36.316 23.665 29.678 3.787 0.269 -0.097 C8 OX2 16 OX2 C9 C9 C 0 1 N N N 37.777 23.625 30.001 5.209 0.259 -0.597 C9 OX2 17 OX2 H1 H1 H 0 1 N N N 32.454 23.302 28.014 0.073 0.017 -1.429 H1 OX2 18 OX2 H2 H2 H 0 1 N N N 34.745 22.507 26.085 -0.217 -1.405 1.257 H2 OX2 19 OX2 HO2 HO2 H 0 1 N Y N 34.169 24.574 25.125 1.390 -2.270 -0.130 HO2 OX2 20 OX2 H3 H3 H 0 1 N N N 31.703 23.016 25.671 -1.857 -1.625 -1.312 H3 OX2 21 OX2 HO3 HO3 H 0 1 N Y N 32.204 22.285 23.481 -1.771 -3.478 0.035 HO3 OX2 22 OX2 H4 H4 H 0 1 N N N 33.361 20.401 25.452 -2.576 -0.324 1.356 H4 OX2 23 OX2 HO4 HO4 H 0 1 N Y N 31.207 19.490 25.156 -4.292 -1.225 0.133 HO4 OX2 24 OX2 H5 H5 H 0 1 N N N 31.208 21.292 27.474 -1.877 0.913 -1.346 H5 OX2 25 OX2 H61 H61 H 0 1 N N N 31.008 18.845 27.299 -3.746 2.044 -0.105 H61 OX2 26 OX2 H62 H62 H 0 1 N N N 31.898 19.089 28.714 -2.658 2.234 1.290 H62 OX2 27 OX2 HO6 HO6 H 0 1 N Y N 32.999 17.556 27.278 -2.694 4.080 -0.068 HO6 OX2 28 OX2 H91 H91 H 0 1 N N N 37.851 23.338 31.076 5.485 1.260 -0.928 H91 OX2 29 OX2 H92 H92 H 0 1 N N N 38.558 23.035 29.466 5.875 -0.055 0.207 H92 OX2 30 OX2 H93 H93 H 0 1 N N N 38.127 24.684 29.995 5.295 -0.437 -1.432 H93 OX2 31 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OX2 C1 C2 SING N N 1 OX2 C1 O5 SING N N 2 OX2 C1 C7 SING N N 3 OX2 C1 H1 SING N N 4 OX2 C2 O2 SING N N 5 OX2 C2 C3 SING N N 6 OX2 C2 H2 SING N N 7 OX2 O2 HO2 SING N N 8 OX2 C3 O3 SING N N 9 OX2 C3 C4 SING N N 10 OX2 C3 H3 SING N N 11 OX2 O3 HO3 SING N N 12 OX2 C4 O4 SING N N 13 OX2 C4 C5 SING N N 14 OX2 C4 H4 SING N N 15 OX2 O4 HO4 SING N N 16 OX2 C5 O5 SING N N 17 OX2 C5 C6 SING N N 18 OX2 C5 H5 SING N N 19 OX2 C6 O6 SING N N 20 OX2 C6 H61 SING N N 21 OX2 C6 H62 SING N N 22 OX2 O6 HO6 SING N N 23 OX2 N1 N2 SING Y N 24 OX2 N1 C8 DOUB Y N 25 OX2 N2 C7 DOUB Y N 26 OX2 C7 O7 SING Y N 27 OX2 O7 C8 SING Y N 28 OX2 C8 C9 SING N N 29 OX2 C9 H91 SING N N 30 OX2 C9 H92 SING N N 31 OX2 C9 H93 SING N N 32 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OX2 SMILES ACDLabs 10.04 "OC1C(O)C(O)C(OC1CO)c2nnc(o2)C" OX2 SMILES_CANONICAL CACTVS 3.341 "Cc1oc(nn1)[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O" OX2 SMILES CACTVS 3.341 "Cc1oc(nn1)[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O" OX2 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1nnc(o1)[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O" OX2 SMILES "OpenEye OEToolkits" 1.5.0 "Cc1nnc(o1)C2C(C(C(C(O2)CO)O)O)O" OX2 InChI InChI 1.03 "InChI=1S/C9H14N2O6/c1-3-10-11-9(16-3)8-7(15)6(14)5(13)4(2-12)17-8/h4-8,12-15H,2H2,1H3/t4-,5-,6+,7-,8-/m1/s1" OX2 InChIKey InChI 1.03 HCSFWJQLIPWUFZ-JAJWTYFOSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier OX2 "SYSTEMATIC NAME" ACDLabs 10.04 "(1R)-1,5-anhydro-1-(5-methyl-1,3,4-oxadiazol-2-yl)-D-glucitol" OX2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(2R,3S,4S,5R,6R)-2-(hydroxymethyl)-6-(5-methyl-1,3,4-oxadiazol-2-yl)oxane-3,4,5-triol" # # loop_ _pdbx_chem_comp_feature.comp_id _pdbx_chem_comp_feature.type _pdbx_chem_comp_feature.value _pdbx_chem_comp_feature.source _pdbx_chem_comp_feature.support OX2 "CARBOHYDRATE ISOMER" D PDB ? OX2 "CARBOHYDRATE RING" pyranose PDB ? OX2 "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ? # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OX2 "Create component" 2004-10-05 RCSB OX2 "Modify descriptor" 2011-06-04 RCSB OX2 "Other modification" 2020-07-03 RCSB OX2 "Modify name" 2020-07-17 RCSB OX2 "Modify synonyms" 2020-07-17 RCSB OX2 "Modify linking type" 2020-07-17 RCSB OX2 "Modify leaving atom flag" 2020-07-17 RCSB ##