data_OY5 # _chem_comp.id OY5 _chem_comp.name "CA IX mimic" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C8 H12 B18 Co N2 O4 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 6 _chem_comp.pdbx_initial_date 2020-04-07 _chem_comp.pdbx_modified_date 2020-09-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 517.853 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OY5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6YKC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OY5 O2 O1 O 0 1 N N N -2.656 2.984 86.315 -2.656 2.984 86.315 O2 OY5 1 OY5 C2 C1 C 2 1 N N N 1.449 7.827 83.100 1.449 7.827 83.100 C2 OY5 2 OY5 C3 C2 C 1 1 N N N 0.555 7.083 84.304 0.555 7.083 84.304 C3 OY5 3 OY5 O3 O2 O 0 1 N N N 4.968 6.145 81.310 4.968 6.145 81.310 O3 OY5 4 OY5 C4 C3 C 2 1 N N N -0.051 4.239 83.006 -0.051 4.239 83.006 C4 OY5 5 OY5 O4 O3 O 0 1 N N N 5.909 8.316 80.465 5.909 8.316 80.465 O4 OY5 6 OY5 C5 C4 C 0 1 N N N -0.386 4.068 84.476 -0.386 4.068 84.476 C5 OY5 7 OY5 C6 C5 C 0 1 N N N -0.493 2.570 84.780 -0.493 2.570 84.780 C6 OY5 8 OY5 C1 C6 C 1 1 N N N -1.097 4.755 81.839 -1.097 4.755 81.839 C1 OY5 9 OY5 O1 O4 O 0 1 N N N -0.407 2.731 87.572 -0.407 2.731 87.572 O1 OY5 10 OY5 N1 N1 N 0 1 N N N -1.387 0.647 86.433 -1.387 0.647 86.433 N1 OY5 11 OY5 C7 C7 C 0 1 N N N 2.962 7.520 83.083 2.962 7.520 83.083 C7 OY5 12 OY5 C8 C8 C 0 1 N N N 3.797 8.364 82.117 3.797 8.364 82.117 C8 OY5 13 OY5 B8 B1 B 0 1 N N N 1.477 5.421 80.991 1.477 5.421 80.991 B8 OY5 14 OY5 B2 B2 B 0 1 N N N 0.788 4.223 79.849 0.788 4.223 79.849 B2 OY5 15 OY5 B3 B3 B 0 1 N N N 1.920 3.686 81.120 1.920 3.686 81.120 B3 OY5 16 OY5 B7 B4 B 0 1 N N N 1.541 4.663 82.582 1.541 4.663 82.582 B7 OY5 17 OY5 B6 B5 B 0 1 N N N 0.928 2.965 82.412 0.928 2.965 82.412 B6 OY5 18 OY5 B5 B6 B 0 1 N N N -0.769 3.064 81.956 -0.769 3.064 81.956 B5 OY5 19 OY5 B4 B7 B 0 1 N N N 0.462 2.699 80.727 0.462 2.699 80.727 B4 OY5 20 OY5 S1 S1 S 0 1 N N N -1.305 2.264 86.379 -1.305 2.264 86.379 S1 OY5 21 OY5 B9 B8 B 0 1 N N N -0.237 5.474 80.562 -0.237 5.474 80.562 B9 OY5 22 OY5 B1 B9 B 0 1 N N N -0.877 3.829 80.401 -0.877 3.829 80.401 B1 OY5 23 OY5 CO1 CO1 CO 0 0 N N N 0.201 6.224 82.477 0.201 6.224 82.477 CO1 OY5 24 OY5 S2 S2 S 0 1 N N N 5.402 7.571 81.687 5.402 7.571 81.687 S2 OY5 25 OY5 N2 N2 N 0 1 N N N 6.364 7.708 82.948 6.364 7.708 82.948 N2 OY5 26 OY5 B15 B10 B 0 1 N N N 1.086 8.720 84.545 1.086 8.720 84.545 B15 OY5 27 OY5 B13 B11 B 0 1 N N N 0.995 9.482 82.943 0.995 9.482 82.943 B13 OY5 28 OY5 B14 B12 B 0 1 N N N 0.445 8.218 81.764 0.445 8.218 81.764 B14 OY5 29 OY5 B16 B13 B 0 1 N N N -0.535 8.224 85.019 -0.535 8.224 85.019 B16 OY5 30 OY5 B17 B14 B 0 1 N N N -1.664 8.696 83.709 -1.664 8.696 83.709 B17 OY5 31 OY5 B11 B15 B 0 1 N N N -0.698 9.475 82.411 -0.698 9.475 82.411 B11 OY5 32 OY5 B12 B16 B 0 1 N N N -0.294 9.763 84.136 -0.294 9.763 84.136 B12 OY5 33 OY5 B18 B17 B 0 1 N N N -1.123 7.006 83.867 -1.123 7.006 83.867 B18 OY5 34 OY5 B10 B18 B 0 1 N N N -1.229 7.787 82.228 -1.229 7.787 82.228 B10 OY5 35 OY5 H1 H1 H 0 1 N N N 0.408 4.516 85.092 0.408 4.516 85.092 H1 OY5 36 OY5 H2 H2 H 0 1 N N N -1.344 4.561 84.698 -1.344 4.561 84.698 H2 OY5 37 OY5 H3 H3 H 0 1 N N N -1.078 2.086 83.984 -1.078 2.086 83.984 H3 OY5 38 OY5 H4 H4 H 0 1 N N N 0.518 2.138 84.805 0.518 2.138 84.805 H4 OY5 39 OY5 H5 H5 H 0 1 N N N -0.463 0.267 86.473 -0.463 0.267 86.473 H5 OY5 40 OY5 H6 H6 H 0 1 N N N -1.898 0.366 87.245 -1.898 0.366 87.245 H6 OY5 41 OY5 H7 H7 H 0 1 N N N 3.352 7.683 84.099 3.352 7.683 84.099 H7 OY5 42 OY5 H8 H8 H 0 1 N N N 3.090 6.463 82.806 3.090 6.463 82.806 H8 OY5 43 OY5 H9 H9 H 0 1 N N N 3.220 8.515 81.193 3.220 8.515 81.193 H9 OY5 44 OY5 H10 H10 H 0 1 N N N 4.000 9.338 82.586 4.000 9.338 82.586 H10 OY5 45 OY5 H12 H12 H 0 1 N N N 6.580 8.673 83.100 6.580 8.672 83.100 H12 OY5 46 OY5 H13 H13 H 0 1 N N N 5.908 7.337 83.757 5.908 7.337 83.757 H13 OY5 47 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OY5 O2 S1 DOUB N N 1 OY5 C2 C3 SING N N 2 OY5 C2 C7 SING N N 3 OY5 C2 CO1 SING N N 4 OY5 C2 B15 SING N N 5 OY5 C2 B13 SING N N 6 OY5 C2 B14 SING N N 7 OY5 C3 CO1 SING N N 8 OY5 C3 B15 SING N N 9 OY5 C3 B16 SING N N 10 OY5 C3 B18 SING N N 11 OY5 O3 S2 DOUB N N 12 OY5 C4 C5 SING N N 13 OY5 C4 C1 SING N N 14 OY5 C4 B7 SING N N 15 OY5 C4 B6 SING N N 16 OY5 C4 B5 SING N N 17 OY5 C4 CO1 SING N N 18 OY5 O4 S2 DOUB N N 19 OY5 C5 C6 SING N N 20 OY5 C6 S1 SING N N 21 OY5 C1 B5 SING N N 22 OY5 C1 B9 SING N N 23 OY5 C1 B1 SING N N 24 OY5 C1 CO1 SING N N 25 OY5 O1 S1 DOUB N N 26 OY5 N1 S1 SING N N 27 OY5 C7 C8 SING N N 28 OY5 C8 S2 SING N N 29 OY5 B8 B2 SING N N 30 OY5 B8 B7 SING N N 31 OY5 B8 B9 SING N N 32 OY5 B8 CO1 SING N N 33 OY5 B2 B3 SING N N 34 OY5 B2 B4 SING N N 35 OY5 B2 B9 SING N N 36 OY5 B3 B6 SING N N 37 OY5 B7 CO1 SING N N 38 OY5 B6 B5 SING N N 39 OY5 B6 B4 SING N N 40 OY5 B5 B4 SING N N 41 OY5 B5 B1 SING N N 42 OY5 B4 B1 SING N N 43 OY5 B9 B1 SING N N 44 OY5 B9 CO1 SING N N 45 OY5 CO1 B14 SING N N 46 OY5 CO1 B18 SING N N 47 OY5 CO1 B10 SING N N 48 OY5 S2 N2 SING N N 49 OY5 B15 B13 SING N N 50 OY5 B15 B16 SING N N 51 OY5 B15 B12 SING N N 52 OY5 B13 B11 SING N N 53 OY5 B13 B12 SING N N 54 OY5 B14 B10 SING N N 55 OY5 B16 B17 SING N N 56 OY5 B16 B12 SING N N 57 OY5 B16 B18 SING N N 58 OY5 B17 B12 SING N N 59 OY5 B17 B18 SING N N 60 OY5 B17 B10 SING N N 61 OY5 B11 B12 SING N N 62 OY5 B11 B10 SING N N 63 OY5 C5 H1 SING N N 64 OY5 C5 H2 SING N N 65 OY5 C6 H3 SING N N 66 OY5 C6 H4 SING N N 67 OY5 N1 H5 SING N N 68 OY5 N1 H6 SING N N 69 OY5 C7 H7 SING N N 70 OY5 C7 H8 SING N N 71 OY5 C8 H9 SING N N 72 OY5 C8 H10 SING N N 73 OY5 N2 H12 SING N N 74 OY5 N2 H13 SING N N 75 OY5 B3 B7 SING N N 76 OY5 B6 B7 SING N N 77 OY5 B3 B8 SING N N 78 OY5 B3 B4 SING N N 79 OY5 B11 B14 SING N N 80 OY5 B13 B14 SING N N 81 OY5 B10 B18 SING N N 82 OY5 B11 B17 SING N N 83 OY5 B1 B2 SING N N 84 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OY5 InChI InChI 1.03 "InChI=1S/2C4H6B9NO2S.Co/c2*14-17(15,16)2-1-4-3-5-7-6(4)10(4)8(3,4)9(3,5)11(5,7)12(6,7,10)13(8,9,10)11;/h2*1-2H2,(H2,14,15,16);/q;;+6" OY5 InChIKey InChI 1.03 ZFLDGVQOTLFANW-UHFFFAOYSA-N OY5 SMILES_CANONICAL CACTVS 3.385 "N[S](=O)(=O)CC[C++]123[C+]45[B]678[B]149[B]6%10%11[B]7%12%13[B]58%14[B]%12%15%16[B]%10%13%17[B]29%11[B]3%15%17[Co]%14%16%18%19[B]%20%21%22[C+]%23%24[B]%20%25%26[B]%23%27%28[B]%25%29%30[B]%21%26%31[B]%29%32%33[B]%27%30%34[B]%18%32([B]%19%22%31%33)[C++]%24%28%34CC[S](N)(=O)=O" OY5 SMILES CACTVS 3.385 "N[S](=O)(=O)CC[C++]123[C+]45[B]678[B]149[B]6%10%11[B]7%12%13[B]58%14[B]%12%15%16[B]%10%13%17[B]29%11[B]3%15%17[Co]%14%16%18%19[B]%20%21%22[C+]%23%24[B]%20%25%26[B]%23%27%28[B]%25%29%30[B]%21%26%31[B]%29%32%33[B]%27%30%34[B]%18%32([B]%19%22%31%33)[C++]%24%28%34CC[S](N)(=O)=O" OY5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1234B567B189B212B33%10B454B656B787B911[C+2]232([C+]4%105[Co]76121234B567B118B559B66%10B272B667B%1055B911B565[C+]318[C+2]4752CCS(=O)(=O)N)CCS(=O)(=O)N" OY5 SMILES "OpenEye OEToolkits" 2.0.7 "B1234B567B189B212B33%10B454B656B787B911[C+2]232([C+]4%105[Co]76121234B567B118B559B66%10B272B667B%1055B911B565[C+]318[C+2]4752CCS(=O)(=O)N)CCS(=O)(=O)N" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OY5 "Create component" 2020-04-07 PDBE OY5 "Initial release" 2020-09-09 RCSB ##