data_OY6 # _chem_comp.id OY6 _chem_comp.name "~{N}-(2-methoxyphenyl)-4-[[2-(4-oxidanylidene-3~{H}-quinazolin-2-yl)ethyl-(thiophen-2-ylmethyl)carbamoyl]amino]benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C30 H27 N5 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-09-28 _chem_comp.pdbx_modified_date 2023-10-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 553.631 _chem_comp.one_letter_code ? _chem_comp.three_letter_code OY6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8B6M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal OY6 N12 N1 N 0 1 N N N -39.611 -12.905 12.717 -5.633 -0.828 -0.239 N12 OY6 1 OY6 C17 C1 C 0 1 Y N N -39.096 -1.943 5.992 7.441 -1.385 -0.077 C17 OY6 2 OY6 C20 C2 C 0 1 Y N N -39.136 -5.754 7.621 2.772 -0.561 -1.184 C20 OY6 3 OY6 C21 C3 C 0 1 Y N N -39.276 -7.218 7.859 1.556 0.018 -0.898 C21 OY6 4 OY6 C22 C4 C 0 1 Y N N -40.578 -7.674 8.484 1.392 0.756 0.270 C22 OY6 5 OY6 C24 C5 C 0 1 N N N -40.347 -11.879 10.556 -3.413 0.553 0.186 C24 OY6 6 OY6 C26 C6 C 0 1 N N N -38.720 -11.897 12.295 -5.081 -1.139 0.895 C26 OY6 7 OY6 C28 C7 C 0 1 Y N N -40.583 -14.190 14.594 -7.376 -1.084 -1.874 C28 OY6 8 OY6 C01 C8 C 0 1 N N N -37.274 -3.355 3.041 9.712 1.080 1.419 C01 OY6 9 OY6 N02 N2 N 0 1 N N N -39.274 -3.225 6.637 6.178 -0.879 0.254 N02 OY6 10 OY6 O03 O1 O 0 1 N N N -38.269 -3.315 4.029 8.491 0.443 1.039 O03 OY6 11 OY6 S04 S1 S 0 1 Y N N -37.183 -11.711 7.150 -0.887 4.506 -0.259 S04 OY6 12 OY6 C05 C9 C 0 1 Y N N -38.635 -2.032 4.531 8.591 -0.710 0.326 C05 OY6 13 OY6 N06 N3 N 0 1 N N N -40.414 -9.027 8.659 0.160 1.342 0.556 N06 OY6 14 OY6 O07 O2 O 0 1 N N N -40.667 -2.598 8.344 5.292 -1.671 -1.622 O07 OY6 15 OY6 C08 C10 C 0 1 Y N N -38.499 -0.739 3.712 9.838 -1.219 0.000 C08 OY6 16 OY6 N09 N4 N 0 1 N N N -40.309 -10.980 9.565 -2.172 1.235 0.565 N09 OY6 17 OY6 O10 O3 O 0 1 N N N -41.388 -9.117 10.903 -0.936 -0.320 -0.428 O10 OY6 18 OY6 C11 C11 C 0 1 Y N N -38.911 0.601 4.312 9.939 -2.392 -0.724 C11 OY6 19 OY6 O13 O4 O 0 1 N N N -37.179 -10.668 15.345 -7.208 -3.553 2.198 O13 OY6 20 OY6 C14 C12 C 0 1 Y N N -39.422 0.683 5.746 8.798 -3.062 -1.125 C14 OY6 21 OY6 N15 N5 N 0 1 N N N -37.878 -11.110 13.211 -5.594 -2.064 1.747 N15 OY6 22 OY6 C16 C13 C 0 1 Y N N -39.519 -0.605 6.559 7.550 -2.561 -0.804 C16 OY6 23 OY6 C18 C14 C 0 1 N N N -40.122 -3.423 7.735 5.147 -1.027 -0.601 C18 OY6 24 OY6 C19 C15 C 0 1 Y N N -40.273 -4.865 8.086 3.842 -0.408 -0.298 C19 OY6 25 OY6 C23 C16 C 0 1 N N N -40.758 -9.628 9.899 -0.981 0.715 0.208 C23 OY6 26 OY6 C25 C17 C 0 1 N N N -38.786 -11.723 10.819 -3.805 -0.438 1.284 C25 OY6 27 OY6 C27 C18 C 0 1 Y N N -39.635 -13.113 14.114 -6.782 -1.418 -0.655 C27 OY6 28 OY6 C29 C19 C 0 1 Y N N -40.739 -14.435 16.047 -8.543 -1.708 -2.257 C29 OY6 29 OY6 C30 C20 C 0 1 Y N N -39.917 -13.615 16.991 -9.136 -2.666 -1.446 C30 OY6 30 OY6 C31 C21 C 0 1 Y N N -38.955 -12.596 16.498 -8.568 -3.013 -0.239 C31 OY6 31 OY6 C32 C22 C 0 1 Y N N -38.857 -12.302 15.070 -7.389 -2.393 0.167 C32 OY6 32 OY6 C33 C23 C 0 1 N N N -37.863 -11.332 14.626 -6.737 -2.722 1.444 C33 OY6 33 OY6 C34 C24 C 0 1 N N N -39.659 -11.667 8.394 -2.227 2.482 1.331 C34 OY6 34 OY6 C35 C25 C 0 1 Y N N -38.738 -11.454 7.167 -2.284 3.652 0.383 C35 OY6 35 OY6 C36 C26 C 0 1 Y N N -39.182 -11.293 5.764 -3.402 4.200 -0.096 C36 OY6 36 OY6 C37 C27 C 0 1 Y N N -37.877 -11.310 4.817 -3.207 5.269 -0.953 C37 OY6 37 OY6 C38 C28 C 0 1 Y N N -36.685 -11.562 5.659 -1.930 5.590 -1.170 C38 OY6 38 OY6 C39 C29 C 0 1 Y N N -41.713 -6.828 8.966 2.456 0.910 1.154 C39 OY6 39 OY6 C40 C30 C 0 1 Y N N -41.567 -5.346 8.712 3.674 0.333 0.875 C40 OY6 40 OY6 H201 H1 H 0 0 N N N -38.262 -5.343 7.138 2.897 -1.137 -2.089 H201 OY6 41 OY6 H211 H2 H 0 0 N N N -38.493 -7.915 7.600 0.729 -0.099 -1.582 H211 OY6 42 OY6 H241 H3 H 0 0 N N N -40.972 -11.573 11.408 -4.207 1.289 0.060 H241 OY6 43 OY6 H242 H4 H 0 0 N N N -40.642 -12.887 10.228 -3.261 0.017 -0.750 H242 OY6 44 OY6 H281 H5 H 0 0 N N N -41.143 -14.777 13.881 -6.924 -0.340 -2.512 H281 OY6 45 OY6 H013 H6 H 0 0 N N N -37.091 -4.399 2.746 9.490 1.987 1.981 H013 OY6 46 OY6 H011 H7 H 0 0 N N N -37.605 -2.779 2.164 10.297 0.402 2.040 H011 OY6 47 OY6 H012 H8 H 0 0 N N N -36.346 -2.918 3.438 10.281 1.337 0.526 H012 OY6 48 OY6 H021 H9 H 0 0 N N N -38.766 -4.010 6.282 6.045 -0.422 1.100 H021 OY6 49 OY6 H061 H10 H 0 0 N N N -40.053 -9.588 7.914 0.123 2.201 1.005 H061 OY6 50 OY6 H081 H11 H 0 0 N N N -38.109 -0.779 2.706 10.732 -0.698 0.312 H081 OY6 51 OY6 H111 H12 H 0 0 N N N -38.840 1.499 3.716 10.912 -2.786 -0.977 H111 OY6 52 OY6 H141 H13 H 0 0 N N N -39.709 1.631 6.177 8.882 -3.977 -1.691 H141 OY6 53 OY6 H151 H14 H 0 0 N N N -37.294 -10.393 12.831 -5.136 -2.255 2.581 H151 OY6 54 OY6 H161 H15 H 0 0 N N N -39.901 -0.560 7.568 6.661 -3.089 -1.115 H161 OY6 55 OY6 H251 H16 H 0 0 N N N -38.210 -12.500 10.296 -3.011 -1.173 1.411 H251 OY6 56 OY6 H252 H17 H 0 0 N N N -38.424 -10.730 10.514 -3.957 0.099 2.220 H252 OY6 57 OY6 H291 H18 H 0 0 N N N -41.426 -15.183 16.414 -9.001 -1.449 -3.200 H291 OY6 58 OY6 H301 H19 H 0 0 N N N -40.026 -13.767 18.055 -10.051 -3.145 -1.764 H301 OY6 59 OY6 H311 H20 H 0 0 N N N -38.324 -12.069 17.199 -9.035 -3.759 0.387 H311 OY6 60 OY6 H342 H21 H 0 0 N N N -40.545 -12.095 7.902 -3.115 2.483 1.963 H342 OY6 61 OY6 H341 H22 H 0 0 N N N -39.109 -12.464 8.916 -1.337 2.564 1.956 H341 OY6 62 OY6 H361 H23 H 0 0 N N N -40.204 -11.183 5.432 -4.385 3.836 0.165 H361 OY6 63 OY6 H371 H24 H 0 0 N N N -37.873 -11.162 3.747 -4.026 5.803 -1.412 H371 OY6 64 OY6 H381 H25 H 0 0 N N N -35.663 -11.631 5.316 -1.589 6.393 -1.807 H381 OY6 65 OY6 H391 H26 H 0 0 N N N -42.577 -7.247 9.461 2.325 1.483 2.060 H391 OY6 66 OY6 H401 H27 H 0 0 N N N -42.356 -4.654 8.967 4.499 0.453 1.562 H401 OY6 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal OY6 C01 O03 SING N N 1 OY6 C08 C11 DOUB Y N 2 OY6 C08 C05 SING Y N 3 OY6 O03 C05 SING N N 4 OY6 C11 C14 SING Y N 5 OY6 C05 C17 DOUB Y N 6 OY6 C37 C38 DOUB Y N 7 OY6 C37 C36 SING Y N 8 OY6 C38 S04 SING Y N 9 OY6 C14 C16 DOUB Y N 10 OY6 C36 C35 DOUB Y N 11 OY6 C17 C16 SING Y N 12 OY6 C17 N02 SING N N 13 OY6 N02 C18 SING N N 14 OY6 S04 C35 SING Y N 15 OY6 C35 C34 SING N N 16 OY6 C20 C21 DOUB Y N 17 OY6 C20 C19 SING Y N 18 OY6 C18 C19 SING N N 19 OY6 C18 O07 DOUB N N 20 OY6 C21 C22 SING Y N 21 OY6 C19 C40 DOUB Y N 22 OY6 C34 N09 SING N N 23 OY6 C22 N06 SING N N 24 OY6 C22 C39 DOUB Y N 25 OY6 N06 C23 SING N N 26 OY6 C40 C39 SING Y N 27 OY6 N09 C23 SING N N 28 OY6 N09 C24 SING N N 29 OY6 C23 O10 DOUB N N 30 OY6 C24 C25 SING N N 31 OY6 C25 C26 SING N N 32 OY6 C26 N12 DOUB N N 33 OY6 C26 N15 SING N N 34 OY6 N12 C27 SING N N 35 OY6 N15 C33 SING N N 36 OY6 C27 C28 DOUB Y N 37 OY6 C27 C32 SING Y N 38 OY6 C28 C29 SING Y N 39 OY6 C33 C32 SING N N 40 OY6 C33 O13 DOUB N N 41 OY6 C32 C31 DOUB Y N 42 OY6 C29 C30 DOUB Y N 43 OY6 C31 C30 SING Y N 44 OY6 C20 H201 SING N N 45 OY6 C21 H211 SING N N 46 OY6 C24 H241 SING N N 47 OY6 C24 H242 SING N N 48 OY6 C28 H281 SING N N 49 OY6 C01 H013 SING N N 50 OY6 C01 H011 SING N N 51 OY6 C01 H012 SING N N 52 OY6 N02 H021 SING N N 53 OY6 N06 H061 SING N N 54 OY6 C08 H081 SING N N 55 OY6 C11 H111 SING N N 56 OY6 C14 H141 SING N N 57 OY6 N15 H151 SING N N 58 OY6 C16 H161 SING N N 59 OY6 C25 H251 SING N N 60 OY6 C25 H252 SING N N 61 OY6 C29 H291 SING N N 62 OY6 C30 H301 SING N N 63 OY6 C31 H311 SING N N 64 OY6 C34 H342 SING N N 65 OY6 C34 H341 SING N N 66 OY6 C36 H361 SING N N 67 OY6 C37 H371 SING N N 68 OY6 C38 H381 SING N N 69 OY6 C39 H391 SING N N 70 OY6 C40 H401 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor OY6 InChI InChI 1.06 "InChI=1S/C30H27N5O4S/c1-39-26-11-5-4-10-25(26)33-28(36)20-12-14-21(15-13-20)31-30(38)35(19-22-7-6-18-40-22)17-16-27-32-24-9-3-2-8-23(24)29(37)34-27/h2-15,18H,16-17,19H2,1H3,(H,31,38)(H,33,36)(H,32,34,37)" OY6 InChIKey InChI 1.06 CHCNDJNLIDGUFS-UHFFFAOYSA-N OY6 SMILES_CANONICAL CACTVS 3.385 "COc1ccccc1NC(=O)c2ccc(NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5sccc5)cc2" OY6 SMILES CACTVS 3.385 "COc1ccccc1NC(=O)c2ccc(NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5sccc5)cc2" OY6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccccc1NC(=O)c2ccc(cc2)NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5cccs5" OY6 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccccc1NC(=O)c2ccc(cc2)NC(=O)N(CCC3=Nc4ccccc4C(=O)N3)Cc5cccs5" # _pdbx_chem_comp_identifier.comp_id OY6 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(2-methoxyphenyl)-4-[[2-(4-oxidanylidene-3~{H}-quinazolin-2-yl)ethyl-(thiophen-2-ylmethyl)carbamoyl]amino]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site OY6 "Create component" 2022-09-28 PDBE OY6 "Modify formula" 2023-05-15 PDBE OY6 "Initial release" 2023-10-11 RCSB #