data_P1G # _chem_comp.id P1G _chem_comp.name "((2R,4R,6R,6AS)-4-(2-AMINO-6-OXO-1,6-DIHYDROPURIN-9-YL)-6-(HYDROXYMETHYL)-TETRAHYDROFURO[3,4-D][1,3]DIOXOL-2-YL)METHYLPHOSPHONIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N5 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "GUANOSINE-2',3'-O-ETHYLIDENEPHOSPHONATE" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-08-04 _chem_comp.pdbx_modified_date 2021-03-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 389.258 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P1G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 2AI1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P1G O3 O3 O 0 1 N N N 68.009 -40.109 97.055 3.965 0.740 -1.027 O3 P1G 1 P1G P P P 0 1 N N N 66.492 -40.567 97.265 3.152 1.975 -0.389 P P1G 2 P1G O4 O4 O 0 1 N N N 65.653 -39.256 97.681 3.890 3.355 -0.765 O4 P1G 3 P1G O2 O2 O 0 1 N N N 65.918 -41.187 96.046 1.774 1.989 -0.929 O2 P1G 4 P1G C1P C1P C 0 1 N N N 66.463 -41.713 98.659 3.093 1.791 1.424 C1P P1G 5 P1G C1 C1 C 0 1 N N R 65.228 -42.639 98.621 2.283 0.543 1.784 C1 P1G 6 P1G "O3'" "O3'" O 0 1 N N N 65.082 -43.368 99.852 2.873 -0.630 1.184 "O3'" P1G 7 P1G "O2'" "O2'" O 0 1 N N N 65.264 -43.673 97.615 0.959 0.618 1.214 "O2'" P1G 8 P1G "C2'" "C2'" C 0 1 N N R 65.780 -44.885 98.198 0.494 -0.760 1.170 "C2'" P1G 9 P1G "C3'" "C3'" C 0 1 N N R 65.627 -44.696 99.701 1.805 -1.598 1.143 "C3'" P1G 10 P1G "C4'" "C4'" C 0 1 N N R 67.033 -44.810 100.294 1.792 -2.262 -0.250 "C4'" P1G 11 P1G "C5'" "C5'" C 0 1 N N N 67.325 -46.128 101.030 2.361 -3.681 -0.171 "C5'" P1G 12 P1G "O5'" "O5'" O 0 1 N N N 68.670 -46.148 101.528 2.382 -4.259 -1.478 "O5'" P1G 13 P1G "O4'" "O4'" O 0 1 N N N 67.907 -44.564 99.178 0.400 -2.300 -0.631 "O4'" P1G 14 P1G "C1'" "C1'" C 0 1 N N R 67.285 -45.074 97.981 -0.144 -1.030 -0.210 "C1'" P1G 15 P1G N9 N9 N 0 1 Y N N 67.831 -46.426 97.709 -1.601 -1.115 -0.090 N9 P1G 16 P1G C8 C8 C 0 1 Y N N 69.113 -46.745 97.910 -2.332 -2.254 0.086 C8 P1G 17 P1G N7 N7 N 0 1 Y N N 69.333 -48.031 97.652 -3.598 -1.960 0.151 N7 P1G 18 P1G C5 C5 C 0 1 Y N N 68.168 -48.547 97.266 -3.755 -0.620 0.022 C5 P1G 19 P1G C4 C4 C 0 1 Y N N 67.207 -47.525 97.277 -2.479 -0.066 -0.134 C4 P1G 20 P1G N3 N3 N 0 1 Y N N 65.942 -47.708 96.820 -2.345 1.257 -0.283 N3 P1G 21 P1G C2 C2 C 0 1 Y N N 65.492 -48.877 96.322 -3.393 2.050 -0.287 C2 P1G 22 P1G N2 N2 N 0 1 N N N 64.292 -49.043 95.768 -3.206 3.401 -0.444 N2 P1G 23 P1G N1 N1 N 0 1 Y N N 66.419 -49.935 96.309 -4.660 1.571 -0.135 N1 P1G 24 P1G C6 C6 C 0 1 Y N N 67.740 -49.784 96.776 -4.874 0.245 0.016 C6 P1G 25 P1G O6 O6 O 0 1 N N N 68.479 -50.768 96.737 -6.004 -0.194 0.148 O6 P1G 26 P1G HO3 HO3 H 0 1 N N N 68.503 -40.882 96.809 4.855 0.767 -0.650 HO3 P1G 27 P1G HO4 HO4 H 0 1 N N N 64.751 -39.528 97.805 3.900 3.413 -1.730 HO4 P1G 28 P1G H1P1 1H1P H 0 0 N N N 67.408 -42.301 98.718 2.620 2.670 1.863 H1P1 P1G 29 P1G H1P2 2H1P H 0 0 N N N 66.532 -41.170 99.630 4.106 1.691 1.812 H1P2 P1G 30 P1G H1 H1 H 0 1 N N N 64.398 -41.923 98.410 2.225 0.428 2.866 H1 P1G 31 P1G "H2'" "H2'" H 0 1 N N N 65.242 -45.750 97.745 -0.165 -1.009 2.001 "H2'" P1G 32 P1G "H3'" "H3'" H 0 1 N N N 64.967 -45.437 100.209 1.863 -2.322 1.955 "H3'" P1G 33 P1G "H4'" "H4'" H 0 1 N N N 67.179 -44.073 101.118 2.363 -1.665 -0.961 "H4'" P1G 34 P1G "H5'1" "1H5'" H 0 0 N N N 66.582 -46.321 101.839 3.375 -3.644 0.226 "H5'1" P1G 35 P1G "H5'2" "2H5'" H 0 0 N N N 67.109 -47.014 100.388 1.735 -4.287 0.484 "H5'2" P1G 36 P1G "H5'" "H5'" H 0 1 N N N 68.850 -46.962 101.982 2.746 -5.150 -1.383 "H5'" P1G 37 P1G "H1'" "H1'" H 0 1 N N N 67.506 -44.546 97.024 0.133 -0.247 -0.915 "H1'" P1G 38 P1G H8 H8 H 0 1 N N N 69.889 -46.037 98.245 -1.921 -3.250 0.160 H8 P1G 39 P1G HN21 1HN2 H 0 0 N N N 63.951 -49.927 95.391 -2.310 3.758 -0.549 HN21 P1G 40 P1G HN22 2HN2 H 0 0 N N N 64.208 -48.350 95.023 -3.970 3.998 -0.452 HN22 P1G 41 P1G HN1 HN1 H 0 1 N N N 66.123 -50.842 95.948 -5.412 2.183 -0.142 HN1 P1G 42 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P1G O3 P SING N N 1 P1G O3 HO3 SING N N 2 P1G P O4 SING N N 3 P1G P O2 DOUB N N 4 P1G P C1P SING N N 5 P1G O4 HO4 SING N N 6 P1G C1P C1 SING N N 7 P1G C1P H1P1 SING N N 8 P1G C1P H1P2 SING N N 9 P1G C1 "O3'" SING N N 10 P1G C1 "O2'" SING N N 11 P1G C1 H1 SING N N 12 P1G "O3'" "C3'" SING N N 13 P1G "O2'" "C2'" SING N N 14 P1G "C2'" "C3'" SING N N 15 P1G "C2'" "C1'" SING N N 16 P1G "C2'" "H2'" SING N N 17 P1G "C3'" "C4'" SING N N 18 P1G "C3'" "H3'" SING N N 19 P1G "C4'" "C5'" SING N N 20 P1G "C4'" "O4'" SING N N 21 P1G "C4'" "H4'" SING N N 22 P1G "C5'" "O5'" SING N N 23 P1G "C5'" "H5'1" SING N N 24 P1G "C5'" "H5'2" SING N N 25 P1G "O5'" "H5'" SING N N 26 P1G "O4'" "C1'" SING N N 27 P1G "C1'" N9 SING N N 28 P1G "C1'" "H1'" SING N N 29 P1G N9 C8 SING Y N 30 P1G N9 C4 SING Y N 31 P1G C8 N7 DOUB Y N 32 P1G C8 H8 SING N N 33 P1G N7 C5 SING Y N 34 P1G C5 C4 DOUB Y N 35 P1G C5 C6 SING Y N 36 P1G C4 N3 SING Y N 37 P1G N3 C2 DOUB Y N 38 P1G C2 N2 SING N N 39 P1G C2 N1 SING Y N 40 P1G N2 HN21 SING N N 41 P1G N2 HN22 SING N N 42 P1G N1 C6 SING Y N 43 P1G N1 HN1 SING N N 44 P1G C6 O6 DOUB N N 45 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P1G SMILES ACDLabs 10.04 "O=C4NC(=Nc1c4ncn1C3OC(C2OC(OC23)CP(=O)(O)O)CO)N" P1G SMILES_CANONICAL CACTVS 3.341 "NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO)[C@H]4O[C@@H](C[P](O)(O)=O)O[C@@H]34" P1G SMILES CACTVS 3.341 "NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO)[CH]4O[CH](C[P](O)(O)=O)O[CH]34" P1G SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1[C@H]3[C@H]4[C@@H]([C@H](O3)CO)O[C@H](O4)CP(=O)(O)O)N=C(NC2=O)N" P1G SMILES "OpenEye OEToolkits" 1.5.0 "c1nc2c(n1C3C4C(C(O3)CO)OC(O4)CP(=O)(O)O)N=C(NC2=O)N" P1G InChI InChI 1.03 "InChI=1S/C12H16N5O8P/c13-12-15-9-6(10(19)16-12)14-3-17(9)11-8-7(4(1-18)23-11)24-5(25-8)2-26(20,21)22/h3-5,7-8,11,18H,1-2H2,(H2,20,21,22)(H3,13,15,16,19)/t4-,5-,7-,8-,11-/m1/s1" P1G InChIKey InChI 1.03 HYAPEMYRVFIHDJ-QWEIRQIHSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier P1G "SYSTEMATIC NAME" ACDLabs 10.04 "2',3'-O-[(1R)-2-phosphonoethylidene]guanosine" P1G "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3aR,4R,6R,6aR)-4-(2-amino-6-oxo-1H-purin-9-yl)-6-(hydroxymethyl)-3a,4,6,6a-tetrahydrofuro[3,4-d][1,3]dioxol-2-yl]methylphosphonic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P1G "Create component" 2005-08-04 RCSB P1G "Modify descriptor" 2011-06-04 RCSB P1G "Modify synonyms" 2021-03-13 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id P1G _pdbx_chem_comp_synonyms.name "GUANOSINE-2',3'-O-ETHYLIDENEPHOSPHONATE" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? ##