data_P5A # _chem_comp.id P5A _chem_comp.name "'5'-O-(N-(L-PROLYL)-SULFAMOYL)ADENOSINE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H21 N7 O7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2003-01-07 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 443.435 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P5A _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1NJ5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P5A CB CB C 0 1 N N N -33.812 -78.633 -41.035 2.668 0.422 -5.284 CB P5A 1 P5A CG CG C 0 1 N N N -34.699 -77.756 -40.166 4.202 0.306 -5.175 CG P5A 2 P5A C C C 0 1 N N N -34.225 -80.896 -39.973 0.877 -0.149 -3.628 C P5A 3 P5A O O O 0 1 N N N -35.035 -81.179 -39.082 0.889 -1.316 -3.295 O P5A 4 P5A N N N 0 1 N N N -36.037 -79.552 -40.999 3.248 -0.009 -2.996 N P5A 5 P5A CD CD C 0 1 N N N -36.159 -78.162 -40.510 4.507 0.413 -3.665 CD P5A 6 P5A CA CA C 0 1 N N S -34.619 -79.930 -41.103 2.174 0.589 -3.830 CA P5A 7 P5A N3S N3S N 0 1 N N N -32.982 -81.391 -40.011 -0.296 0.484 -3.817 N3S P5A 8 P5A S S S 0 1 N N N -32.365 -82.386 -38.938 -1.722 -0.327 -3.594 S P5A 9 P5A O1S O1S O 0 1 N N N -33.281 -83.530 -38.748 -1.625 -1.502 -4.388 O1S P5A 10 P5A O2S O2S O 0 1 N N N -30.978 -82.645 -39.454 -2.745 0.652 -3.697 O2S P5A 11 P5A "O5'" O5* O 0 1 N N N -32.231 -81.575 -37.570 -1.752 -0.806 -2.150 "O5'" P5A 12 P5A "C5'" C5* C 0 1 N N N -31.492 -80.337 -37.511 -2.367 0.230 -1.383 "C5'" P5A 13 P5A "C4'" C4* C 0 1 N N R -30.365 -80.388 -36.496 -2.429 -0.189 0.086 "C4'" P5A 14 P5A "O4'" O4* O 0 1 N N N -30.901 -80.647 -35.177 -1.098 -0.394 0.606 "O4'" P5A 15 P5A "C1'" C1* C 0 1 N N R -29.989 -81.402 -34.406 -1.231 -0.292 2.041 "C1'" P5A 16 P5A N9 N9 N 0 1 Y N N -30.673 -82.567 -33.815 0.065 0.006 2.653 N9 P5A 17 P5A C4 C4 C 0 1 Y N N -30.771 -82.810 -32.451 0.457 -0.320 3.927 C4 P5A 18 P5A N3 N3 N 0 1 Y N N -30.267 -82.051 -31.423 -0.111 -0.946 4.952 N3 P5A 19 P5A C2 C2 C 0 1 Y N N -30.551 -82.582 -30.224 0.540 -1.112 6.083 C2 P5A 20 P5A N1 N1 N 0 1 Y N N -31.247 -83.716 -29.955 1.773 -0.673 6.261 N1 P5A 21 P5A C6 C6 C 0 1 Y N N -31.741 -84.457 -30.994 2.423 -0.035 5.293 C6 P5A 22 P5A N6 N6 N 0 1 N N N -32.422 -85.561 -30.700 3.715 0.420 5.489 N6 P5A 23 P5A C5 C5 C 0 1 Y N N -31.506 -83.994 -32.331 1.766 0.170 4.068 C5 P5A 24 P5A N7 N7 N 0 1 Y N N -31.850 -84.487 -33.580 2.103 0.753 2.892 N7 P5A 25 P5A C8 C8 C 0 1 Y N N -31.340 -83.610 -34.421 1.105 0.660 2.062 C8 P5A 26 P5A "C2'" C2* C 0 1 N N R -28.771 -81.670 -35.295 -2.214 0.877 2.267 "C2'" P5A 27 P5A "O2'" O2* O 0 1 N N N -27.778 -80.732 -34.919 -3.081 0.605 3.369 "O2'" P5A 28 P5A "C3'" C3* C 0 1 N N S -29.342 -81.494 -36.697 -3.020 0.947 0.948 "C3'" P5A 29 P5A "O3'" O3* O 0 1 N N N -28.354 -81.054 -37.625 -4.408 0.718 1.196 "O3'" P5A 30 P5A HB1 1HB H 0 1 N N N -33.536 -78.195 -42.022 2.250 -0.482 -5.724 HB1 P5A 31 P5A HB2 2HB H 0 1 N N N -32.762 -78.747 -40.675 2.395 1.294 -5.878 HB2 P5A 32 P5A HG1 1HG H 0 1 N N N -34.462 -77.819 -39.078 4.538 -0.655 -5.562 HG1 P5A 33 P5A HG2 2HG H 0 1 N N N -34.499 -76.665 -40.281 4.683 1.121 -5.716 HG2 P5A 34 P5A HT1 HT1 H 0 1 N N N -36.534 -79.692 -41.878 3.222 0.460 -2.104 HT1 P5A 35 P5A HD1 1HD H 0 1 N N N -36.881 -78.032 -39.670 5.324 -0.254 -3.394 HD1 P5A 36 P5A HD2 2HD H 0 1 N N N -36.672 -77.470 -41.217 4.750 1.441 -3.398 HD2 P5A 37 P5A HA HA H 0 1 N N N -34.416 -80.466 -42.059 2.050 1.645 -3.590 HA P5A 38 P5A H3S H3S H 0 1 N N N -32.515 -81.018 -40.838 -0.306 1.417 -4.083 H3S P5A 39 P5A "H1'1" 1H1* H 0 0 N N N -31.113 -80.045 -38.518 -3.377 0.406 -1.754 "H1'1" P5A 40 P5A "H1'2" 2H1* H 0 0 N N N -32.169 -79.472 -37.318 -1.782 1.145 -1.475 "H1'2" P5A 41 P5A "H4'" H4* H 0 1 N N N -29.866 -79.398 -36.621 -3.023 -1.096 0.195 "H4'" P5A 42 P5A "H1'" H1* H 0 1 N N N -29.599 -80.868 -33.507 -1.639 -1.215 2.451 "H1'" P5A 43 P5A H2 H2 H 0 1 N N N -30.166 -82.019 -29.356 0.049 -1.625 6.896 H2 P5A 44 P5A H61 1H6 H 0 1 N N N -32.790 -86.113 -31.474 4.156 0.275 6.340 H61 P5A 45 P5A H62 2H6 H 0 1 N N N -33.183 -85.325 -30.063 4.180 0.881 4.773 H62 P5A 46 P5A H8 H8 H 0 1 N N N -31.458 -83.735 -35.510 1.101 1.045 1.053 H8 P5A 47 P5A "H2'" H2* H 0 1 N N N -28.279 -82.667 -35.217 -1.669 1.806 2.431 "H2'" P5A 48 P5A "HO'2" 2HO* H 0 0 N N N -27.022 -80.898 -35.470 -3.708 1.340 3.420 "HO'2" P5A 49 P5A "H3'" H3* H 0 1 N N N -29.750 -82.445 -37.111 -2.874 1.911 0.461 "H3'" P5A 50 P5A H3T H3T H 0 1 N N N -27.714 -81.745 -37.750 -4.721 1.457 1.736 H3T P5A 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P5A CB CG SING N N 1 P5A CB CA SING N N 2 P5A CB HB1 SING N N 3 P5A CB HB2 SING N N 4 P5A CG CD SING N N 5 P5A CG HG1 SING N N 6 P5A CG HG2 SING N N 7 P5A C O DOUB N N 8 P5A C CA SING N N 9 P5A C N3S SING N N 10 P5A N CD SING N N 11 P5A N CA SING N N 12 P5A N HT1 SING N N 13 P5A CD HD1 SING N N 14 P5A CD HD2 SING N N 15 P5A CA HA SING N N 16 P5A N3S S SING N N 17 P5A N3S H3S SING N N 18 P5A S O1S DOUB N N 19 P5A S O2S DOUB N N 20 P5A S "O5'" SING N N 21 P5A "O5'" "C5'" SING N N 22 P5A "C5'" "C4'" SING N N 23 P5A "C5'" "H1'1" SING N N 24 P5A "C5'" "H1'2" SING N N 25 P5A "C4'" "O4'" SING N N 26 P5A "C4'" "C3'" SING N N 27 P5A "C4'" "H4'" SING N N 28 P5A "O4'" "C1'" SING N N 29 P5A "C1'" N9 SING N N 30 P5A "C1'" "C2'" SING N N 31 P5A "C1'" "H1'" SING N N 32 P5A N9 C4 SING Y N 33 P5A N9 C8 SING Y N 34 P5A C4 N3 DOUB Y N 35 P5A C4 C5 SING Y N 36 P5A N3 C2 SING Y N 37 P5A C2 N1 DOUB Y N 38 P5A C2 H2 SING N N 39 P5A N1 C6 SING Y N 40 P5A C6 N6 SING N N 41 P5A C6 C5 DOUB Y N 42 P5A N6 H61 SING N N 43 P5A N6 H62 SING N N 44 P5A C5 N7 SING Y N 45 P5A N7 C8 DOUB Y N 46 P5A C8 H8 SING N N 47 P5A "C2'" "O2'" SING N N 48 P5A "C2'" "C3'" SING N N 49 P5A "C2'" "H2'" SING N N 50 P5A "O2'" "HO'2" SING N N 51 P5A "C3'" "O3'" SING N N 52 P5A "C3'" "H3'" SING N N 53 P5A "O3'" H3T SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P5A SMILES ACDLabs 10.04 "O=C(NS(=O)(=O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O)C4NCCC4" P5A SMILES_CANONICAL CACTVS 3.341 "Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[S](=O)(=O)NC(=O)[C@@H]4CCCN4)[C@@H](O)[C@H]3O" P5A SMILES CACTVS 3.341 "Nc1ncnc2n(cnc12)[CH]3O[CH](CO[S](=O)(=O)NC(=O)[CH]4CCCN4)[CH](O)[CH]3O" P5A SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COS(=O)(=O)NC(=O)[C@@H]4CCCN4)O)O)N" P5A SMILES "OpenEye OEToolkits" 1.5.0 "c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COS(=O)(=O)NC(=O)C4CCCN4)O)O)N" P5A InChI InChI 1.03 "InChI=1S/C15H21N7O7S/c16-12-9-13(19-5-18-12)22(6-20-9)15-11(24)10(23)8(29-15)4-28-30(26,27)21-14(25)7-2-1-3-17-7/h5-8,10-11,15,17,23-24H,1-4H2,(H,21,25)(H2,16,18,19)/t7-,8+,10+,11+,15+/m0/s1" P5A InChIKey InChI 1.03 LKVJEMXWEODCAY-JVEUSOJLSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier P5A "SYSTEMATIC NAME" ACDLabs 10.04 "5'-O-(L-prolylsulfamoyl)adenosine" P5A "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methyl N-[(2S)-pyrrolidin-2-yl]carbonylsulfamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P5A "Create component" 2003-01-07 RCSB P5A "Modify descriptor" 2011-06-04 RCSB #