data_P5C # _chem_comp.id P5C _chem_comp.name "2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-[(3-methylphenyl)amino]pyrimidine-5-carboxamide" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H24 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2009-01-09 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.423 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P5C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3FQE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P5C C2 C2 C 0 1 Y N N 3.533 2.684 13.505 1.077 0.694 0.115 C2 P5C 1 P5C C3 C3 C 0 1 Y N N 5.305 1.783 14.732 0.396 2.897 0.075 C3 P5C 2 P5C N1 N1 N 0 1 Y N N 2.788 1.591 13.806 -0.168 0.243 0.075 N1 P5C 3 P5C C4 C4 C 0 1 Y N N 4.550 0.652 15.057 -0.937 2.473 0.031 C4 P5C 4 P5C C6 C6 C 0 1 Y N N 3.254 0.564 14.573 -1.195 1.085 0.033 C6 P5C 5 P5C C8 C8 C 0 1 N N N 5.153 -0.433 15.914 -2.039 3.447 -0.014 C8 P5C 6 P5C C12 C12 C 0 1 Y N N 1.187 -0.755 14.518 -2.740 -0.756 0.146 C12 P5C 7 P5C C13 C13 C 0 1 Y N N 0.520 -0.025 13.526 -1.934 -1.521 0.979 C13 P5C 8 P5C C14 C14 C 0 1 Y N N -1.496 -1.303 13.877 -3.242 -3.459 0.460 C14 P5C 9 P5C C15 C15 C 0 1 Y N N -0.839 -2.039 14.861 -4.047 -2.700 -0.370 C15 P5C 10 P5C C16 C16 C 0 1 Y N N -0.815 -0.285 13.202 -2.188 -2.870 1.134 C16 P5C 11 P5C C17 C17 C 0 1 Y N N 0.491 -1.764 15.182 -3.799 -1.350 -0.529 C17 P5C 12 P5C C18 C18 C 0 1 N N N -1.567 -3.150 15.579 -5.194 -3.346 -1.102 C18 P5C 13 P5C O10 O10 O 0 1 N N N 4.509 -1.429 16.227 -3.185 3.063 -0.155 O10 P5C 14 P5C N9 N9 N 0 1 N N N 6.406 -0.278 16.326 -1.779 4.764 0.101 N9 P5C 15 P5C N11 N11 N 0 1 N N N 2.488 -0.528 14.871 -2.490 0.611 -0.009 N11 P5C 16 P5C N5 N5 N 0 1 Y N N 4.796 2.772 13.971 1.356 1.992 0.115 N5 P5C 17 P5C N7 N7 N 0 1 N N N 3.025 3.684 12.743 2.114 -0.214 0.163 N7 P5C 18 P5C C19 C19 C 0 1 N N R 1.623 3.736 12.347 3.500 0.260 0.208 C19 P5C 19 P5C C24 C24 C 0 1 N N S 0.733 4.398 13.423 4.382 -0.805 0.863 C24 P5C 20 P5C N25 N25 N 0 1 N N N 1.173 5.759 13.705 3.908 -1.061 2.230 N25 P5C 21 P5C C23 C23 C 0 1 N N N -0.727 4.442 12.971 4.311 -2.098 0.048 C23 P5C 22 P5C C22 C22 C 0 1 N N N -0.888 5.107 11.595 4.805 -1.831 -1.375 C22 P5C 23 P5C C21 C21 C 0 1 N N N 0.033 4.518 10.526 3.923 -0.766 -2.030 C21 P5C 24 P5C C20 C20 C 0 1 N N N 1.493 4.439 10.986 3.994 0.527 -1.215 C20 P5C 25 P5C H3 H3 H 0 1 N N N 6.318 1.866 15.099 0.636 3.950 0.075 H3 P5C 26 P5C H13 H13 H 0 1 N N N 1.049 0.756 13.000 -1.110 -1.061 1.504 H13 P5C 27 P5C H14 H14 H 0 1 N N N -2.527 -1.518 13.637 -3.438 -4.513 0.583 H14 P5C 28 P5C H16 H16 H 0 1 N N N -1.315 0.294 12.439 -1.561 -3.465 1.781 H16 P5C 29 P5C H17 H17 H 0 1 N N N 0.985 -2.338 15.952 -4.428 -0.758 -1.178 H17 P5C 30 P5C H18 H18 H 0 1 N N N -1.744 -3.983 14.883 -6.092 -3.295 -0.487 H18 P5C 31 P5C H18A H18A H 0 0 N N N -0.957 -3.502 16.424 -5.367 -2.821 -2.042 H18A P5C 32 P5C H18B H18B H 0 0 N N N -2.531 -2.774 15.954 -4.953 -4.389 -1.308 H18B P5C 33 P5C HN9 HN9 H 0 1 N N N 6.776 0.585 15.982 -0.866 5.071 0.213 HN9 P5C 34 P5C HN9A HN9A H 0 0 N N N 6.906 -0.929 16.897 -2.506 5.406 0.071 HN9A P5C 35 P5C HN11 HN11 H 0 0 N N N 2.931 -1.244 15.410 -3.227 1.227 -0.146 HN11 P5C 36 P5C HN7 HN7 H 0 1 N N N 3.182 4.521 13.267 1.927 -1.165 0.168 HN7 P5C 37 P5C H19 H19 H 0 1 N N N 1.257 2.704 12.247 3.550 1.181 0.789 H19 P5C 38 P5C H24 H24 H 0 1 N N N 0.821 3.789 14.334 5.413 -0.452 0.896 H24 P5C 39 P5C HN25 HN25 H 0 0 N N N 1.274 5.879 14.693 4.475 -1.761 2.684 HN25 P5C 40 P5C HN2A HN2A H 0 0 N N N 2.052 5.924 13.258 3.884 -0.209 2.770 HN2A P5C 41 P5C H23 H23 H 0 1 N N N -1.106 3.411 12.909 4.940 -2.856 0.515 H23 P5C 42 P5C H23A H23A H 0 0 N N N -1.291 5.037 13.704 3.280 -2.450 0.015 H23A P5C 43 P5C H22 H22 H 0 1 N N N -1.929 4.969 11.266 5.836 -1.479 -1.342 H22 P5C 44 P5C H22A H22A H 0 0 N N N -0.620 6.167 11.710 4.755 -2.752 -1.956 H22A P5C 45 P5C H21 H21 H 0 1 N N N -0.313 3.501 10.290 4.275 -0.576 -3.044 H21 P5C 46 P5C H21A H21A H 0 0 N N N -0.007 5.179 9.648 2.892 -1.119 -2.063 H21A P5C 47 P5C H20 H20 H 0 1 N N N 1.891 5.461 11.077 3.366 1.285 -1.682 H20 P5C 48 P5C H20A H20A H 0 0 N N N 2.057 3.857 10.243 5.025 0.879 -1.182 H20A P5C 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P5C C2 N1 DOUB Y N 1 P5C C2 N5 SING Y N 2 P5C C2 N7 SING N N 3 P5C C3 C4 SING Y N 4 P5C C3 N5 DOUB Y N 5 P5C N1 C6 SING Y N 6 P5C C4 C6 DOUB Y N 7 P5C C4 C8 SING N N 8 P5C C6 N11 SING N N 9 P5C C8 O10 DOUB N N 10 P5C C8 N9 SING N N 11 P5C C12 C13 DOUB Y N 12 P5C C12 C17 SING Y N 13 P5C C12 N11 SING N N 14 P5C C13 C16 SING Y N 15 P5C C14 C15 SING Y N 16 P5C C14 C16 DOUB Y N 17 P5C C15 C17 DOUB Y N 18 P5C C15 C18 SING N N 19 P5C N7 C19 SING N N 20 P5C C19 C24 SING N N 21 P5C C19 C20 SING N N 22 P5C C24 N25 SING N N 23 P5C C24 C23 SING N N 24 P5C C23 C22 SING N N 25 P5C C22 C21 SING N N 26 P5C C21 C20 SING N N 27 P5C C3 H3 SING N N 28 P5C C13 H13 SING N N 29 P5C C14 H14 SING N N 30 P5C C16 H16 SING N N 31 P5C C17 H17 SING N N 32 P5C C18 H18 SING N N 33 P5C C18 H18A SING N N 34 P5C C18 H18B SING N N 35 P5C N9 HN9 SING N N 36 P5C N9 HN9A SING N N 37 P5C N11 HN11 SING N N 38 P5C N7 HN7 SING N N 39 P5C C19 H19 SING N N 40 P5C C24 H24 SING N N 41 P5C N25 HN25 SING N N 42 P5C N25 HN2A SING N N 43 P5C C23 H23 SING N N 44 P5C C23 H23A SING N N 45 P5C C22 H22 SING N N 46 P5C C22 H22A SING N N 47 P5C C21 H21 SING N N 48 P5C C21 H21A SING N N 49 P5C C20 H20 SING N N 50 P5C C20 H20A SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P5C SMILES ACDLabs 10.04 "O=C(c1cnc(nc1Nc2cc(ccc2)C)NC3C(N)CCCC3)N" P5C SMILES_CANONICAL CACTVS 3.341 "Cc1cccc(Nc2nc(N[C@@H]3CCCC[C@@H]3N)ncc2C(N)=O)c1" P5C SMILES CACTVS 3.341 "Cc1cccc(Nc2nc(N[CH]3CCCC[CH]3N)ncc2C(N)=O)c1" P5C SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "Cc1cccc(c1)Nc2c(cnc(n2)N[C@@H]3CCCC[C@@H]3N)C(=O)N" P5C SMILES "OpenEye OEToolkits" 1.5.0 "Cc1cccc(c1)Nc2c(cnc(n2)NC3CCCCC3N)C(=O)N" P5C InChI InChI 1.03 "InChI=1S/C18H24N6O/c1-11-5-4-6-12(9-11)22-17-13(16(20)25)10-21-18(24-17)23-15-8-3-2-7-14(15)19/h4-6,9-10,14-15H,2-3,7-8,19H2,1H3,(H2,20,25)(H2,21,22,23,24)/t14-,15+/m0/s1" P5C InChIKey InChI 1.03 NZNTWOVDIXCHHS-LSDHHAIUSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier P5C "SYSTEMATIC NAME" ACDLabs 10.04 "2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-[(3-methylphenyl)amino]pyrimidine-5-carboxamide" P5C "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "2-[[(1R,2S)-2-aminocyclohexyl]amino]-4-[(3-methylphenyl)amino]pyrimidine-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P5C "Create component" 2009-01-09 RCSB P5C "Modify aromatic_flag" 2011-06-04 RCSB P5C "Modify descriptor" 2011-06-04 RCSB #