data_P8N # _chem_comp.id P8N _chem_comp.name ;(~{E})-3-[4-[[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6 ),4,7,10,12-pentaen-9-yl]ethanoylamino]methyl]phenyl]-~{N}-oxidanyl-prop-2-enamide ; _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H27 Cl N6 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms TW22 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-17 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 575.081 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P8N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6YQP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P8N C4 C1 C 0 1 N N N 32.199 14.658 -2.599 -0.804 1.544 1.335 C4 P8N 1 P8N C5 C2 C 0 1 N N N 31.764 13.507 -3.493 0.034 0.438 1.922 C5 P8N 2 P8N C6 C3 C 0 1 N N N 31.889 12.495 -5.713 2.101 -0.847 2.040 C6 P8N 3 P8N N1 N1 N 0 1 Y N N 32.367 16.958 -0.704 -3.450 3.735 2.207 N1 P8N 4 P8N C7 C4 C 0 1 Y N N 30.563 12.793 -6.374 3.448 -0.869 1.365 C7 P8N 5 P8N C8 C5 C 0 1 Y N N 30.412 13.873 -7.232 3.636 -1.635 0.227 C8 P8N 6 P8N N2 N2 N 0 1 N N N 32.286 13.486 -4.720 1.286 0.228 1.469 N2 P8N 7 P8N C9 C6 C 0 1 Y N N 29.185 14.164 -7.804 4.865 -1.656 -0.399 C9 P8N 8 P8N C10 C7 C 0 1 Y N N 28.062 13.379 -7.537 5.922 -0.900 0.117 C10 P8N 9 P8N C11 C8 C 0 1 N N N 26.731 13.681 -8.077 7.236 -0.916 -0.546 C11 P8N 10 P8N C12 C9 C 0 1 N N N 26.359 14.715 -8.823 8.252 -0.186 -0.045 C12 P8N 11 P8N N3 N3 N 0 1 N N N 24.136 13.927 -8.752 10.576 0.527 -0.203 N3 P8N 12 P8N C13 C10 C 0 1 N N N 24.930 14.925 -9.145 9.560 -0.202 -0.704 C13 P8N 13 P8N C14 C11 C 0 1 Y N N 28.231 12.276 -6.702 5.724 -0.129 1.267 C14 P8N 14 P8N C15 C12 C 0 1 Y N N 29.455 11.996 -6.123 4.490 -0.118 1.882 C15 P8N 15 P8N N4 N4 N 0 1 N N N 30.021 15.746 -2.936 -2.893 0.330 1.712 N4 P8N 16 P8N CL CL1 CL 0 0 N N N 25.305 18.220 -6.891 -5.750 -5.386 -0.216 CL P8N 17 P8N C20 C13 C 0 1 Y N N 26.309 17.546 -5.636 -4.995 -3.837 -0.009 C20 P8N 18 P8N C19 C14 C 0 1 Y N N 27.380 16.756 -5.979 -5.277 -2.808 -0.892 C19 P8N 19 P8N C18 C15 C 0 1 Y N N 28.167 16.213 -4.980 -4.681 -1.575 -0.732 C18 P8N 20 P8N C21 C16 C 0 1 Y N N 26.003 17.803 -4.317 -4.117 -3.632 1.042 C21 P8N 21 P8N C22 C17 C 0 1 Y N N 26.803 17.271 -3.323 -3.516 -2.402 1.212 C22 P8N 22 P8N C17 C18 C 0 1 Y N N 27.898 16.473 -3.640 -3.792 -1.365 0.322 C17 P8N 23 P8N C16 C19 C 0 1 N N N 28.802 15.953 -2.593 -3.148 -0.042 0.499 C16 P8N 24 P8N C23 C20 C 0 1 Y N N 28.257 15.796 -1.204 -2.857 0.731 -0.724 C23 P8N 25 P8N C28 C21 C 0 1 Y N N 28.947 16.266 -0.108 -2.981 2.100 -0.837 C28 P8N 26 P8N S S1 S 0 1 Y N N 28.065 16.049 1.350 -2.614 2.619 -2.420 S P8N 27 P8N C26 C22 C 0 1 Y N N 26.753 15.304 0.507 -2.240 0.991 -2.953 C26 P8N 28 P8N C27 C23 C 0 1 N N N 25.538 14.887 1.284 -1.788 0.627 -4.344 C27 P8N 29 P8N C24 C24 C 0 1 Y N N 26.987 15.210 -0.828 -2.410 0.127 -1.967 C24 P8N 30 P8N C25 C25 C 0 1 N N N 26.060 14.492 -1.764 -2.161 -1.352 -2.119 C25 P8N 31 P8N N5 N5 N 0 1 Y N N 30.247 16.802 -0.125 -3.325 2.945 0.221 N5 P8N 32 P8N C2 C26 C 0 1 Y N N 31.249 16.307 -0.937 -2.968 2.741 1.516 C2 P8N 33 P8N N N6 N 0 1 Y N N 32.102 17.908 0.283 -4.090 4.536 1.427 N P8N 34 P8N C1 C27 C 0 1 Y N N 30.840 17.811 0.612 -4.045 4.092 0.196 C1 P8N 35 P8N C C28 C 0 1 N N N 30.139 18.663 1.606 -4.671 4.734 -1.015 C P8N 36 P8N C3 C29 C 0 1 N N S 30.936 15.205 -1.922 -2.171 1.566 2.020 C3 P8N 37 P8N O O1 O 0 1 N N N 30.954 12.673 -3.101 -0.418 -0.264 2.802 O P8N 38 P8N O1 O2 O 0 1 N N N 24.516 15.909 -9.774 9.728 -0.874 -1.705 O1 P8N 39 P8N O2 O3 O 0 1 N N N 23.116 13.488 -9.592 11.840 0.512 -0.841 O2 P8N 40 P8N H1 H1 H 0 1 N N N 32.909 14.298 -1.839 -0.304 2.500 1.491 H1 P8N 41 P8N H2 H2 H 0 1 N N N 32.675 15.445 -3.202 -0.935 1.373 0.267 H2 P8N 42 P8N H3 H3 H 0 1 N N N 31.817 11.516 -5.217 1.601 -1.804 1.884 H3 P8N 43 P8N H4 H4 H 0 1 N N N 32.664 12.455 -6.492 2.233 -0.676 3.108 H4 P8N 44 P8N H5 H5 H 0 1 N N N 31.265 14.496 -7.457 2.819 -2.218 -0.170 H5 P8N 45 P8N H6 H6 H 0 1 N N N 32.971 14.171 -4.967 1.648 0.789 0.766 H6 P8N 46 P8N H7 H7 H 0 1 N N N 29.095 15.012 -8.467 5.010 -2.254 -1.286 H7 P8N 47 P8N H8 H8 H 0 1 N N N 25.954 12.971 -7.837 7.385 -1.513 -1.433 H8 P8N 48 P8N H9 H9 H 0 1 N N N 27.102 15.405 -9.196 8.103 0.410 0.843 H9 P8N 49 P8N H10 H10 H 0 1 N N N 24.273 13.497 -7.860 10.442 1.063 0.594 H10 P8N 50 P8N H11 H11 H 0 1 N N N 27.390 11.628 -6.503 6.535 0.458 1.672 H11 P8N 51 P8N H12 H12 H 0 1 N N N 29.550 11.144 -5.466 4.334 0.480 2.767 H12 P8N 52 P8N H13 H13 H 0 1 N N N 27.605 16.561 -7.017 -5.965 -2.972 -1.709 H13 P8N 53 P8N H14 H14 H 0 1 N N N 29.001 15.579 -5.243 -4.901 -0.774 -1.422 H14 P8N 54 P8N H15 H15 H 0 1 N N N 25.148 18.413 -4.063 -3.904 -4.436 1.731 H15 P8N 55 P8N H16 H16 H 0 1 N N N 26.575 17.477 -2.288 -2.832 -2.243 2.033 H16 P8N 56 P8N H17 H17 H 0 1 N N N 25.678 15.137 2.346 -1.732 1.528 -4.955 H17 P8N 57 P8N H18 H18 H 0 1 N N N 24.655 15.416 0.896 -0.805 0.160 -4.295 H18 P8N 58 P8N H19 H19 H 0 1 N N N 25.390 13.802 1.179 -2.500 -0.069 -4.787 H19 P8N 59 P8N H20 H20 H 0 1 N N N 26.336 13.428 -1.810 -3.054 -1.831 -2.519 H20 P8N 60 P8N H21 H21 H 0 1 N N N 25.026 14.587 -1.401 -1.326 -1.511 -2.801 H21 P8N 61 P8N H22 H22 H 0 1 N N N 26.138 14.934 -2.768 -1.922 -1.782 -1.146 H22 P8N 62 P8N H23 H23 H 0 1 N N N 30.846 19.393 2.027 -5.684 4.352 -1.146 H23 P8N 63 P8N H24 H24 H 0 1 N N N 29.312 19.195 1.114 -4.706 5.814 -0.877 H24 P8N 64 P8N H25 H25 H 0 1 N N N 29.740 18.032 2.413 -4.078 4.499 -1.898 H25 P8N 65 P8N H26 H26 H 0 1 N N N 30.442 14.381 -1.387 -2.037 1.652 3.099 H26 P8N 66 P8N H27 H27 H 0 1 N N N 22.952 14.143 -10.260 12.505 1.066 -0.410 H27 P8N 67 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P8N O1 C13 DOUB N N 1 P8N O2 N3 SING N N 2 P8N C13 C12 SING N N 3 P8N C13 N3 SING N N 4 P8N C12 C11 DOUB N E 5 P8N C11 C10 SING N N 6 P8N C9 C10 DOUB Y N 7 P8N C9 C8 SING Y N 8 P8N C10 C14 SING Y N 9 P8N C8 C7 DOUB Y N 10 P8N CL C20 SING N N 11 P8N C14 C15 DOUB Y N 12 P8N C7 C15 SING Y N 13 P8N C7 C6 SING N N 14 P8N C19 C20 DOUB Y N 15 P8N C19 C18 SING Y N 16 P8N C6 N2 SING N N 17 P8N C20 C21 SING Y N 18 P8N C18 C17 DOUB Y N 19 P8N N2 C5 SING N N 20 P8N C21 C22 DOUB Y N 21 P8N C17 C22 SING Y N 22 P8N C17 C16 SING N N 23 P8N C5 O DOUB N N 24 P8N C5 C4 SING N N 25 P8N N4 C16 DOUB N N 26 P8N N4 C3 SING N N 27 P8N C4 C3 SING N N 28 P8N C16 C23 SING N N 29 P8N C3 C2 SING N N 30 P8N C25 C24 SING N N 31 P8N C23 C24 SING Y N 32 P8N C23 C28 DOUB Y N 33 P8N C2 N1 DOUB Y N 34 P8N C2 N5 SING Y N 35 P8N C24 C26 DOUB Y N 36 P8N N1 N SING Y N 37 P8N N5 C28 SING N N 38 P8N N5 C1 SING Y N 39 P8N C28 S SING Y N 40 P8N N C1 DOUB Y N 41 P8N C26 C27 SING N N 42 P8N C26 S SING Y N 43 P8N C1 C SING N N 44 P8N C4 H1 SING N N 45 P8N C4 H2 SING N N 46 P8N C6 H3 SING N N 47 P8N C6 H4 SING N N 48 P8N C8 H5 SING N N 49 P8N N2 H6 SING N N 50 P8N C9 H7 SING N N 51 P8N C11 H8 SING N N 52 P8N C12 H9 SING N N 53 P8N N3 H10 SING N N 54 P8N C14 H11 SING N N 55 P8N C15 H12 SING N N 56 P8N C19 H13 SING N N 57 P8N C18 H14 SING N N 58 P8N C21 H15 SING N N 59 P8N C22 H16 SING N N 60 P8N C27 H17 SING N N 61 P8N C27 H18 SING N N 62 P8N C27 H19 SING N N 63 P8N C25 H20 SING N N 64 P8N C25 H21 SING N N 65 P8N C25 H22 SING N N 66 P8N C H23 SING N N 67 P8N C H24 SING N N 68 P8N C H25 SING N N 69 P8N C3 H26 SING N N 70 P8N O2 H27 SING N N 71 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P8N InChI InChI 1.03 "InChI=1S/C29H27ClN6O3S/c1-16-17(2)40-29-26(16)27(21-9-11-22(30)12-10-21)32-23(28-34-33-18(3)36(28)29)14-25(38)31-15-20-6-4-19(5-7-20)8-13-24(37)35-39/h4-13,23,39H,14-15H2,1-3H3,(H,31,38)(H,35,37)/b13-8+/t23-/m0/s1" P8N InChIKey InChI 1.03 VXVJYUDHNXUFIO-NWMLYGLHSA-N P8N SMILES_CANONICAL CACTVS 3.385 "Cc1sc2n3c(C)nnc3[C@H](CC(=O)NCc4ccc(/C=C/C(=O)NO)cc4)N=C(c5ccc(Cl)cc5)c2c1C" P8N SMILES CACTVS 3.385 "Cc1sc2n3c(C)nnc3[CH](CC(=O)NCc4ccc(C=CC(=O)NO)cc4)N=C(c5ccc(Cl)cc5)c2c1C" P8N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=N[C@H](c3n2c(nn3)C)CC(=O)NCc4ccc(cc4)/C=C/C(=O)NO)c5ccc(cc5)Cl)C" P8N SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(sc-2c1C(=NC(c3n2c(nn3)C)CC(=O)NCc4ccc(cc4)C=CC(=O)NO)c5ccc(cc5)Cl)C" # _pdbx_chem_comp_identifier.comp_id P8N _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(~{E})-3-[4-[[2-[(9~{S})-7-(4-chlorophenyl)-4,5,13-trimethyl-3-thia-1,8,11,12-tetrazatricyclo[8.3.0.0^{2,6}]trideca-2(6),4,7,10,12-pentaen-9-yl]ethanoylamino]methyl]phenyl]-~{N}-oxidanyl-prop-2-enamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P8N "Create component" 2020-04-17 PDBE P8N "Initial release" 2020-05-27 RCSB P8N "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id P8N _pdbx_chem_comp_synonyms.name TW22 _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##