data_P8O # _chem_comp.id P8O _chem_comp.name "(1~{S})-1'-[5-[2-(trifluoromethyl)pyridin-3-yl]sulfanyl-3~{H}-imidazo[4,5-b]pyrazin-2-yl]spiro[1,3-dihydroindene-2,4'-piperidine]-1-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H22 F3 N7 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-03 _chem_comp.pdbx_modified_date 2023-01-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 497.539 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P8O _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8B5Y _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P8O C2 C1 C 0 1 N N N 23.713 8.896 5.844 -5.536 0.033 -1.307 C2 P8O 1 P8O C5 C2 C 0 1 Y N N 23.659 8.368 4.424 -5.435 -1.126 -0.350 C5 P8O 2 P8O C7 C3 C 0 1 Y N N 22.341 8.248 2.496 -5.472 -3.404 -0.002 C7 P8O 3 P8O C8 C4 C 0 1 Y N N 23.309 7.501 1.840 -5.256 -3.246 1.354 C8 P8O 4 P8O C12 C5 C 0 1 Y N N 27.432 6.815 3.524 -3.394 1.184 1.148 C12 P8O 5 P8O N13 N1 N 0 1 Y N N 27.770 7.760 2.627 -2.593 0.259 0.633 N13 P8O 6 P8O C16 C6 C 0 1 Y N N 30.253 7.478 0.158 0.740 0.745 -0.401 C16 P8O 7 P8O C19 C7 C 0 1 Y N N 29.372 6.220 1.766 -0.893 1.897 0.470 C19 P8O 8 P8O C21 C8 C 0 1 Y N N 28.052 5.558 3.537 -2.937 2.488 1.327 C21 P8O 9 P8O N22 N2 N 0 1 N N N 30.992 7.895 -0.939 1.977 0.422 -0.918 N22 P8O 10 P8O C23 C9 C 0 1 N N N 31.201 9.343 -1.162 2.865 1.591 -0.925 C23 P8O 11 P8O C24 C10 C 0 1 N N N 32.442 9.807 -0.393 4.167 1.237 -1.650 C24 P8O 12 P8O C27 C11 C 0 1 Y N N 35.666 9.512 -2.210 7.070 -0.773 -0.575 C27 P8O 13 P8O C30 C12 C 0 1 Y N N 38.405 9.725 -1.687 8.488 -1.321 1.739 C30 P8O 14 P8O C31 C13 C 0 1 Y N N 37.495 9.622 -0.633 7.315 -0.594 1.801 C31 P8O 15 P8O C32 C14 C 0 1 Y N N 36.121 9.515 -0.891 6.604 -0.319 0.645 C32 P8O 16 P8O C33 C15 C 0 1 N N S 34.956 9.395 0.080 5.310 0.444 0.447 C33 P8O 17 P8O C36 C16 C 0 1 N N N 33.433 7.522 -0.657 3.869 -1.133 -0.883 C36 P8O 18 P8O C37 C17 C 0 1 N N N 32.150 7.090 -1.399 2.576 -0.700 -0.184 C37 P8O 19 P8O F1 F1 F 0 1 N N N 24.189 7.897 6.677 -4.308 0.700 -1.364 F1 P8O 20 P8O F3 F2 F 0 1 N N N 24.544 10.005 5.919 -5.869 -0.441 -2.581 F3 P8O 21 P8O F4 F3 F 0 1 N N N 22.454 9.283 6.286 -6.527 0.917 -0.866 F4 P8O 22 P8O N6 N3 N 0 1 Y N N 22.547 8.648 3.738 -5.554 -2.358 -0.803 N6 P8O 23 P8O C9 C18 C 0 1 Y N N 24.494 7.160 2.501 -5.119 -1.969 1.873 C9 P8O 24 P8O C10 C19 C 0 1 Y N N 24.695 7.594 3.832 -5.211 -0.886 1.000 C10 P8O 25 P8O S11 S1 S 0 1 N N N 26.185 7.184 4.691 -5.044 0.762 1.600 S11 P8O 26 P8O C14 C20 C 0 1 Y N N 28.740 7.485 1.740 -1.356 0.580 0.289 C14 P8O 27 P8O N15 N4 N 0 1 Y N N 29.306 8.188 0.737 -0.304 -0.125 -0.262 N15 P8O 28 P8O N17 N5 N 0 1 Y N N 30.300 6.247 0.759 0.391 1.932 0.030 N17 P8O 29 P8O N20 N6 N 0 1 Y N N 29.020 5.293 2.665 -1.704 2.815 0.992 N20 P8O 30 P8O C25 C21 C 0 1 N N N 33.712 9.037 -0.794 4.825 0.050 -0.957 C25 P8O 31 P8O C26 C22 C 0 1 N N N 34.158 9.393 -2.245 6.123 -0.345 -1.677 C26 P8O 32 P8O C28 C23 C 0 1 Y N N 36.583 9.615 -3.270 8.246 -1.502 -0.634 C28 P8O 33 P8O C29 C24 C 0 1 Y N N 37.946 9.731 -3.005 8.954 -1.776 0.520 C29 P8O 34 P8O N35 N7 N 0 1 N N N 34.936 10.666 0.842 5.556 1.891 0.514 N35 P8O 35 P8O H1 H1 H 0 1 N N N 21.420 8.502 1.992 -5.575 -4.397 -0.413 H1 P8O 36 P8O H2 H2 H 0 1 N N N 23.148 7.183 0.820 -5.190 -4.108 2.000 H2 P8O 37 P8O H3 H3 H 0 1 N N N 27.745 4.809 4.252 -3.596 3.236 1.742 H3 P8O 38 P8O H4 H4 H 0 1 N N N 31.344 9.531 -2.236 2.375 2.417 -1.440 H4 P8O 39 P8O H5 H5 H 0 1 N N N 30.321 9.899 -0.807 3.089 1.884 0.101 H5 P8O 40 P8O H6 H6 H 0 1 N N N 32.601 10.877 -0.594 3.947 0.978 -2.686 H6 P8O 41 P8O H7 H7 H 0 1 N N N 32.265 9.658 0.683 4.842 2.093 -1.625 H7 P8O 42 P8O H8 H8 H 0 1 N N N 39.463 9.800 -1.483 9.040 -1.533 2.642 H8 P8O 43 P8O H9 H9 H 0 1 N N N 37.851 9.625 0.386 6.951 -0.239 2.754 H9 P8O 44 P8O H10 H10 H 0 1 N N N 35.150 8.559 0.768 4.578 0.150 1.199 H10 P8O 45 P8O H11 H11 H 0 1 N N N 33.323 7.278 0.410 4.334 -1.941 -0.319 H11 P8O 46 P8O H12 H12 H 0 1 N N N 34.286 6.967 -1.074 3.639 -1.479 -1.891 H12 P8O 47 P8O H13 H13 H 0 1 N N N 31.955 6.026 -1.197 2.802 -0.389 0.836 H13 P8O 48 P8O H14 H14 H 0 1 N N N 32.289 7.239 -2.480 1.877 -1.536 -0.163 H14 P8O 49 P8O H15 H15 H 0 1 N N N 25.248 6.571 2.000 -4.950 -1.816 2.929 H15 P8O 50 P8O H16 H16 H 0 1 N N N 29.044 9.116 0.471 -0.306 -1.064 -0.506 H16 P8O 51 P8O H18 H18 H 0 1 N N N 33.708 10.347 -2.558 6.532 0.509 -2.217 H18 P8O 52 P8O H19 H19 H 0 1 N N N 33.855 8.598 -2.942 5.940 -1.174 -2.361 H19 P8O 53 P8O H20 H20 H 0 1 N N N 36.231 9.604 -4.291 8.611 -1.857 -1.587 H20 P8O 54 P8O H21 H21 H 0 1 N N N 38.648 9.826 -3.820 9.871 -2.344 0.470 H21 P8O 55 P8O H22 H22 H 0 1 N N N 34.185 10.648 1.502 5.920 2.154 1.418 H22 P8O 56 P8O H23 H23 H 0 1 N N N 35.803 10.778 1.327 6.174 2.188 -0.225 H23 P8O 57 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P8O C28 C29 DOUB Y N 1 P8O C28 C27 SING Y N 2 P8O C29 C30 SING Y N 3 P8O C26 C27 SING N N 4 P8O C26 C25 SING N N 5 P8O C27 C32 DOUB Y N 6 P8O C30 C31 DOUB Y N 7 P8O C37 N22 SING N N 8 P8O C37 C36 SING N N 9 P8O C23 N22 SING N N 10 P8O C23 C24 SING N N 11 P8O N22 C16 SING N N 12 P8O C32 C31 SING Y N 13 P8O C32 C33 SING N N 14 P8O C25 C36 SING N N 15 P8O C25 C24 SING N N 16 P8O C25 C33 SING N N 17 P8O C33 N35 SING N N 18 P8O C16 N15 SING Y N 19 P8O C16 N17 DOUB Y N 20 P8O N15 C14 SING Y N 21 P8O N17 C19 SING Y N 22 P8O C14 C19 DOUB Y N 23 P8O C14 N13 SING Y N 24 P8O C19 N20 SING Y N 25 P8O C8 C7 DOUB Y N 26 P8O C8 C9 SING Y N 27 P8O C7 N6 SING Y N 28 P8O C9 C10 DOUB Y N 29 P8O N13 C12 DOUB Y N 30 P8O N20 C21 DOUB Y N 31 P8O C12 C21 SING Y N 32 P8O C12 S11 SING N N 33 P8O N6 C5 DOUB Y N 34 P8O C10 C5 SING Y N 35 P8O C10 S11 SING N N 36 P8O C5 C2 SING N N 37 P8O C2 F3 SING N N 38 P8O C2 F4 SING N N 39 P8O C2 F1 SING N N 40 P8O C7 H1 SING N N 41 P8O C8 H2 SING N N 42 P8O C21 H3 SING N N 43 P8O C23 H4 SING N N 44 P8O C23 H5 SING N N 45 P8O C24 H6 SING N N 46 P8O C24 H7 SING N N 47 P8O C30 H8 SING N N 48 P8O C31 H9 SING N N 49 P8O C33 H10 SING N N 50 P8O C36 H11 SING N N 51 P8O C36 H12 SING N N 52 P8O C37 H13 SING N N 53 P8O C37 H14 SING N N 54 P8O C9 H15 SING N N 55 P8O N15 H16 SING N N 56 P8O C26 H18 SING N N 57 P8O C26 H19 SING N N 58 P8O C28 H20 SING N N 59 P8O C29 H21 SING N N 60 P8O N35 H22 SING N N 61 P8O N35 H23 SING N N 62 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P8O InChI InChI 1.06 "InChI=1S/C24H22F3N7S/c25-24(26,27)19-16(6-3-9-29-19)35-17-13-30-20-21(31-17)33-22(32-20)34-10-7-23(8-11-34)12-14-4-1-2-5-15(14)18(23)28/h1-6,9,13,18H,7-8,10-12,28H2,(H,30,31,32,33)/t18-/m1/s1" P8O InChIKey InChI 1.06 REEKVEYVOMDHAS-GOSISDBHSA-N P8O SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1c2ccccc2CC13CCN(CC3)c4[nH]c5nc(Sc6cccnc6C(F)(F)F)cnc5n4" P8O SMILES CACTVS 3.385 "N[CH]1c2ccccc2CC13CCN(CC3)c4[nH]c5nc(Sc6cccnc6C(F)(F)F)cnc5n4" P8O SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)CC3([C@@H]2N)CCN(CC3)c4[nH]c5c(n4)ncc(n5)Sc6cccnc6C(F)(F)F" P8O SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)CC3(C2N)CCN(CC3)c4[nH]c5c(n4)ncc(n5)Sc6cccnc6C(F)(F)F" # _pdbx_chem_comp_identifier.comp_id P8O _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(1~{S})-1'-[5-[2-(trifluoromethyl)pyridin-3-yl]sulfanyl-3~{H}-imidazo[4,5-b]pyrazin-2-yl]spiro[1,3-dihydroindene-2,4'-piperidine]-1-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P8O "Create component" 2022-10-03 PDBE P8O "Initial release" 2023-01-18 RCSB #