data_P8U # _chem_comp.id P8U _chem_comp.name "[(1~{S},2~{R})-2-cyclohexylcyclopropyl]methyl ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H42 N3 O8 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 1 _chem_comp.pdbx_initial_date 2022-05-26 _chem_comp.pdbx_modified_date 2022-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 532.671 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P8U _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8CZW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P8U N1 N1 N 0 1 N N N 20.944 20.647 -1.285 1.109 -0.873 -0.020 N1 P8U 1 P8U C2 C1 C 0 1 N N S 20.971 19.233 -0.985 -0.130 -0.955 -0.798 C2 P8U 2 P8U C3 C2 C 0 1 N N N 22.021 18.937 0.094 -0.363 -2.403 -1.235 C3 P8U 3 P8U C4 C3 C 0 1 N N N 23.428 19.425 -0.350 -1.555 -2.461 -2.192 C4 P8U 4 P8U C6 C4 C 0 1 N N N 23.928 18.617 -1.567 -1.204 -1.732 -3.490 C6 P8U 5 P8U C8 C5 C 0 1 N N S 17.820 16.987 -0.463 -3.651 0.018 0.342 C8 P8U 6 P8U C9 C6 C 0 1 N N N 16.815 16.800 -1.625 -4.673 0.792 -0.493 C9 P8U 7 P8U C10 C7 C 0 1 N N S 16.421 18.181 -2.261 -4.037 2.085 -1.007 C10 P8U 8 P8U C11 C8 C 0 1 N N N 15.442 17.966 -3.386 -5.028 2.869 -1.839 C11 P8U 9 P8U C16 C9 C 0 1 N N S 19.110 24.216 -3.892 5.865 -0.785 0.285 C16 P8U 10 P8U C17 C10 C 0 1 N N R 18.952 25.585 -3.153 7.266 -0.589 -0.298 C17 P8U 11 P8U C19 C11 C 0 1 N N N 20.087 26.613 -3.033 8.290 0.157 0.560 C19 P8U 12 P8U C20 C12 C 0 1 N N N 20.955 26.319 -1.802 7.775 1.567 0.857 C20 P8U 13 P8U C21 C13 C 0 1 N N N 22.056 27.391 -1.596 8.799 2.314 1.714 C21 P8U 14 P8U C22 C14 C 0 1 N N N 21.498 28.823 -1.565 10.127 2.404 0.960 C22 P8U 15 P8U C1 C15 C 0 1 N N N 19.920 21.135 -2.196 2.297 -0.798 -0.651 C1 P8U 16 P8U C12 C16 C 0 1 N N N 14.575 19.753 -1.950 -4.007 4.415 -0.438 C12 P8U 17 P8U C13 C17 C 0 1 N N N 15.779 19.057 -1.229 -3.701 3.029 0.172 C13 P8U 18 P8U C14 C18 C 0 1 N N S 18.150 15.645 0.189 -4.302 -1.252 0.895 C14 P8U 19 P8U C15 C19 C 0 1 N N N 18.665 22.958 -3.099 4.683 -0.739 -0.686 C15 P8U 20 P8U C18 C20 C 0 1 N N N 17.969 25.120 -4.263 6.822 -1.974 0.178 C18 P8U 21 P8U C23 C21 C 0 1 N N N 20.545 29.108 -2.738 10.642 0.994 0.663 C23 P8U 22 P8U C24 C22 C 0 1 N N N 19.468 28.013 -2.907 9.618 0.248 -0.195 C24 P8U 23 P8U C5 C23 C 0 1 N N N 24.425 19.181 0.818 -1.890 -3.921 -2.502 C5 P8U 24 P8U C7 C24 C 0 1 N N N 19.601 18.803 -0.459 -1.287 -0.494 0.050 C7 P8U 25 P8U N2 N2 N 0 1 N N N 19.096 17.503 -0.918 -2.508 -0.346 -0.500 N2 P8U 26 P8U N3 N3 N 0 1 N N N 14.321 18.913 -3.211 -4.994 4.168 -1.495 N3 P8U 27 P8U O1 O1 O 0 1 N N N 19.275 20.362 -2.832 2.338 -0.705 -1.862 O1 P8U 28 P8U O2 O2 O 0 1 N N N 15.512 17.190 -4.281 -5.748 2.395 -2.691 O2 P8U 29 P8U O3 O3 O 0 1 N N N 16.998 15.051 0.739 -3.315 -2.041 1.562 O3 P8U 30 P8U O4 O4 O 0 1 N N N 18.970 19.495 0.285 -1.119 -0.256 1.227 O4 P8U 31 P8U O5 O5 O 0 1 N N N 19.743 22.534 -2.280 3.440 -0.825 0.060 O5 P8U 32 P8U S1 S1 S 1 1 N Y N 18.969 14.551 -1.000 -5.609 -0.800 2.068 S1 P8U 33 P8U H1 H1 H 0 1 N N N 21.610 21.272 -0.878 1.074 -0.870 0.949 H1 P8U 34 P8U H2 H2 H 0 1 N N N 21.210 18.654 -1.889 -0.048 -0.318 -1.679 H2 P8U 35 P8U H3 H3 H 0 1 N N N 21.738 19.453 1.023 0.527 -2.777 -1.741 H3 P8U 36 P8U H4 H4 H 0 1 N N N 22.056 17.852 0.274 -0.569 -3.018 -0.359 H4 P8U 37 P8U H5 H5 H 0 1 N N N 23.393 20.497 -0.596 -2.417 -1.981 -1.728 H5 P8U 38 P8U H6 H6 H 0 1 N N N 24.924 18.978 -1.864 -0.391 -2.256 -3.993 H6 P8U 39 P8U H7 H7 H 0 1 N N N 23.989 17.552 -1.300 -2.077 -1.707 -4.141 H7 P8U 40 P8U H8 H8 H 0 1 N N N 23.227 18.745 -2.405 -0.892 -0.712 -3.262 H8 P8U 41 P8U H9 H9 H 0 1 N N N 17.380 17.659 0.289 -3.310 0.641 1.168 H9 P8U 42 P8U H10 H10 H 0 1 N N N 15.908 16.310 -1.240 -4.989 0.182 -1.339 H10 P8U 43 P8U H11 H11 H 0 1 N N N 17.274 16.166 -2.398 -5.538 1.033 0.124 H11 P8U 44 P8U H12 H12 H 0 1 N N N 17.329 18.666 -2.648 -3.140 1.864 -1.586 H12 P8U 45 P8U H13 H13 H 0 1 N N N 19.951 24.110 -4.593 5.672 -0.381 1.279 H13 P8U 46 P8U H14 H14 H 0 1 N N N 18.497 25.416 -2.166 7.346 -0.428 -1.373 H14 P8U 47 P8U H15 H15 H 0 1 N N N 20.712 26.572 -3.937 8.440 -0.379 1.496 H15 P8U 48 P8U H16 H16 H 0 1 N N N 20.311 26.296 -0.911 7.625 2.104 -0.080 H16 P8U 49 P8U H17 H17 H 0 1 N N N 21.435 25.338 -1.932 6.829 1.503 1.394 H17 P8U 50 P8U H18 H18 H 0 1 N N N 22.565 27.192 -0.642 8.432 3.318 1.926 H18 P8U 51 P8U H19 H19 H 0 1 N N N 22.780 27.314 -2.421 8.949 1.777 2.651 H19 P8U 52 P8U H20 H20 H 0 1 N N N 22.339 29.531 -1.613 9.977 2.941 0.023 H20 P8U 53 P8U H21 H21 H 0 1 N N N 20.950 28.968 -0.622 10.856 2.936 1.571 H21 P8U 54 P8U H22 H22 H 0 1 N N N 14.833 20.787 -2.221 -4.425 5.076 0.321 H22 P8U 55 P8U H23 H23 H 0 1 N N N 13.686 19.755 -1.302 -3.101 4.850 -0.859 H23 P8U 56 P8U H24 H24 H 0 1 N N N 15.421 18.453 -0.382 -4.345 2.828 1.028 H24 P8U 57 P8U H25 H25 H 0 1 N N N 16.495 19.809 -0.866 -2.650 2.948 0.449 H25 P8U 58 P8U H26 H26 H 0 1 N N N 18.893 15.821 0.981 -4.733 -1.826 0.074 H26 P8U 59 P8U H27 H27 H 0 1 N N N 17.797 23.204 -2.470 4.708 0.197 -1.244 H27 P8U 60 P8U H28 H28 H 0 1 N N N 18.394 22.155 -3.800 4.750 -1.578 -1.379 H28 P8U 61 P8U H29 H29 H 0 1 N N N 17.969 25.627 -5.239 7.259 -2.353 1.102 H29 P8U 62 P8U H30 H30 H 0 1 N N N 16.940 24.837 -3.997 6.609 -2.724 -0.584 H30 P8U 63 P8U H31 H31 H 0 1 N N N 21.135 29.168 -3.665 11.588 1.059 0.125 H31 P8U 64 P8U H32 H32 H 0 1 N N N 20.044 30.071 -2.559 10.792 0.458 1.599 H32 P8U 65 P8U H33 H33 H 0 1 N N N 18.884 28.226 -3.814 9.984 -0.757 -0.406 H33 P8U 66 P8U H34 H34 H 0 1 N N N 18.803 28.030 -2.031 9.468 0.785 -1.131 H34 P8U 67 P8U H35 H35 H 0 1 N N N 24.097 19.744 1.704 -2.141 -4.440 -1.577 H35 P8U 68 P8U H36 H36 H 0 1 N N N 24.455 18.108 1.056 -2.740 -3.963 -3.183 H36 P8U 69 P8U H37 H37 H 0 1 N N N 25.429 19.518 0.520 -1.028 -4.401 -2.966 H37 P8U 70 P8U H38 H38 H 0 1 N N N 19.643 16.963 -1.557 -2.631 -0.481 -1.452 H38 P8U 71 P8U H39 H39 H 0 1 N N N 13.528 18.994 -3.814 -5.550 4.855 -1.896 H39 P8U 72 P8U H40 H40 H 0 1 N N N 16.596 15.651 1.356 -2.584 -2.319 0.994 H40 P8U 73 P8U O6 O6 O 0 1 N Y N 18.927 12.929 -0.157 -6.138 -1.887 2.814 O6 P8U 74 P8U O7 O7 O 0 1 N Y N ? ? ? -5.043 0.221 3.045 O7 P8U 75 P8U O8 O8 O 0 1 N Y N ? ? ? -6.747 -0.154 1.291 O8 P8U 76 P8U H41 H41 H 0 1 N Y N ? ? ? -4.660 1.001 2.621 H41 P8U 77 P8U H42 H42 H 0 1 N Y N ? ? ? -7.494 0.121 1.841 H42 P8U 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P8U O2 C11 DOUB N N 1 P8U C18 C16 SING N N 2 P8U C18 C17 SING N N 3 P8U C16 C17 SING N N 4 P8U C16 C15 SING N N 5 P8U C11 N3 SING N N 6 P8U C11 C10 SING N N 7 P8U N3 C12 SING N N 8 P8U C17 C19 SING N N 9 P8U C15 O5 SING N N 10 P8U C19 C24 SING N N 11 P8U C19 C20 SING N N 12 P8U C24 C23 SING N N 13 P8U O1 C1 DOUB N N 14 P8U C23 C22 SING N N 15 P8U O5 C1 SING N N 16 P8U C10 C9 SING N N 17 P8U C10 C13 SING N N 18 P8U C1 N1 SING N N 19 P8U C12 C13 SING N N 20 P8U C20 C21 SING N N 21 P8U C9 C8 SING N N 22 P8U C21 C22 SING N N 23 P8U C6 C4 SING N N 24 P8U N1 C2 SING N N 25 P8U S1 C14 SING N N 26 P8U C2 C7 SING N N 27 P8U C2 C3 SING N N 28 P8U N2 C8 SING N N 29 P8U N2 C7 SING N N 30 P8U C8 C14 SING N N 31 P8U C7 O4 DOUB N N 32 P8U C4 C3 SING N N 33 P8U C4 C5 SING N N 34 P8U C14 O3 SING N N 35 P8U N1 H1 SING N N 36 P8U C2 H2 SING N N 37 P8U C3 H3 SING N N 38 P8U C3 H4 SING N N 39 P8U C4 H5 SING N N 40 P8U C6 H6 SING N N 41 P8U C6 H7 SING N N 42 P8U C6 H8 SING N N 43 P8U C8 H9 SING N N 44 P8U C9 H10 SING N N 45 P8U C9 H11 SING N N 46 P8U C10 H12 SING N N 47 P8U C16 H13 SING N N 48 P8U C17 H14 SING N N 49 P8U C19 H15 SING N N 50 P8U C20 H16 SING N N 51 P8U C20 H17 SING N N 52 P8U C21 H18 SING N N 53 P8U C21 H19 SING N N 54 P8U C22 H20 SING N N 55 P8U C22 H21 SING N N 56 P8U C12 H22 SING N N 57 P8U C12 H23 SING N N 58 P8U C13 H24 SING N N 59 P8U C13 H25 SING N N 60 P8U C14 H26 SING N N 61 P8U C15 H27 SING N N 62 P8U C15 H28 SING N N 63 P8U C18 H29 SING N N 64 P8U C18 H30 SING N N 65 P8U C23 H31 SING N N 66 P8U C23 H32 SING N N 67 P8U C24 H33 SING N N 68 P8U C24 H34 SING N N 69 P8U C5 H35 SING N N 70 P8U C5 H36 SING N N 71 P8U C5 H37 SING N N 72 P8U N2 H38 SING N N 73 P8U N3 H39 SING N N 74 P8U O3 H40 SING N N 75 P8U S1 O6 DOUB N N 76 P8U S1 O7 SING N N 77 P8U S1 O8 SING N N 78 P8U O7 H41 SING N N 79 P8U O8 H42 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P8U InChI InChI 1.03 "InChI=1S/C24H40N3O8S/c1-14(2)10-19(27-24(31)35-13-17-11-18(17)15-6-4-3-5-7-15)22(29)26-20(23(30)36(32,33)34)12-16-8-9-25-21(16)28/h14-20,23,30H,3-13H2,1-2H3,(H3-2,25,26,27,28,29,31,32,33,34)/q-1/p+2/t16-,17+,18+,19-,20-,23-/m0/s1" P8U InChIKey InChI 1.03 BNNIGFVXMNVYNU-MWOXCZGJSA-P P8U SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@H]1C[C@@H]1C2CCCCC2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)[S+](O)(O)=O" P8U SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1C[CH]1C2CCCCC2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S+](O)(O)=O" P8U SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)[S+](=O)(O)O)NC(=O)OC[C@H]2C[C@@H]2C3CCCCC3" P8U SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)[S+](=O)(O)O)NC(=O)OCC2CC2C3CCCCC3" # _pdbx_chem_comp_identifier.comp_id P8U _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "[(1~{S},2~{R})-2-cyclohexylcyclopropyl]methyl ~{N}-[(2~{S})-1-[[(1~{S},2~{S})-1-[bis(oxidanyl)-oxidanylidene-$l^{5}-sulfanyl]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P8U "Create component" 2022-05-26 RCSB P8U "Modify coordinates" 2022-05-26 RCSB P8U "Initial release" 2022-06-22 RCSB #