data_P9F # _chem_comp.id P9F _chem_comp.name "(2S)-2-[[(2S)-2-[(4-chloranylphenoxy)carbonylamino]-3-cyclohexyl-propanoyl]amino]-3-phenyl-propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H29 Cl N2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(2~{S})-2-[[(2~{S})-2-[(4-chloranylphenoxy)carbonylamino]-3-cyclohexyl-propanoyl]amino]-3-phenyl-propanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2022-10-04 _chem_comp.pdbx_modified_date 2023-09-29 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 472.961 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P9F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8B4T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P9F C1 C1 C 0 1 N N N 12.921 5.618 -18.617 -4.585 0.424 -1.971 C1 P9F 1 P9F C3 C2 C 0 1 N N N 12.181 3.980 -20.460 -4.779 -1.128 -0.047 C3 P9F 2 P9F C5 C3 C 0 1 Y N N 10.350 5.046 -21.848 -3.306 -1.980 1.789 C5 P9F 3 P9F C6 C4 C 0 1 Y N N 9.927 6.126 -22.664 -2.686 -3.013 2.468 C6 P9F 4 P9F N2 N1 N 0 1 N N N 8.418 3.206 -15.951 0.897 0.217 -1.469 N2 P9F 5 P9F C13 C5 C 0 1 N N N 8.682 6.175 -15.484 -1.447 2.402 0.550 C13 P9F 6 P9F C12 C6 C 0 1 N N N 8.145 5.523 -16.749 -0.343 2.065 -0.454 C12 P9F 7 P9F C9 C7 C 0 1 Y N N 12.539 6.113 -21.726 -4.267 -3.558 0.266 C9 P9F 8 P9F O4 O1 O 0 1 N N N 12.347 6.654 -18.210 -5.720 0.103 -2.612 O4 P9F 9 P9F O1 O2 O 0 1 N N N 14.166 5.420 -18.713 -4.149 1.549 -2.042 O1 P9F 10 P9F C2 C8 C 0 1 N N S 12.033 4.386 -18.942 -3.859 -0.616 -1.157 C2 P9F 11 P9F C4 C9 C 0 1 Y N N 11.671 5.052 -21.391 -4.098 -2.253 0.690 C4 P9F 12 P9F C8 C10 C 0 1 Y N N 12.117 7.163 -22.540 -3.652 -4.591 0.948 C8 P9F 13 P9F C7 C11 C 0 1 Y N N 10.814 7.168 -23.003 -2.860 -4.318 2.048 C7 P9F 14 P9F N1 N2 N 0 1 N N N 10.626 4.561 -18.528 -2.660 -0.021 -0.563 N1 P9F 15 P9F C10 C12 C 0 1 N N N 10.222 4.091 -17.353 -1.515 0.038 -1.271 C10 P9F 16 P9F O3 O3 O 0 1 N N N 11.032 3.571 -16.562 -1.500 -0.319 -2.431 O3 P9F 17 P9F C11 C13 C 0 1 N N S 8.676 4.141 -17.056 -0.253 0.547 -0.623 C11 P9F 18 P9F C19 C14 C 0 1 N N N 8.321 1.932 -16.273 2.133 0.165 -0.934 C19 P9F 19 P9F O2 O4 O 0 1 N N N 8.528 1.461 -17.358 2.283 0.300 0.264 O2 P9F 20 P9F C18 C15 C 0 1 N N N 7.716 7.326 -15.099 -1.646 3.918 0.600 C18 P9F 21 P9F C17 C16 C 0 1 N N N 8.337 8.339 -14.175 -2.751 4.254 1.604 C17 P9F 22 P9F C16 C17 C 0 1 N N N 9.558 8.944 -14.862 -2.352 3.746 2.991 C16 P9F 23 P9F C15 C18 C 0 1 N N N 10.596 7.835 -14.901 -2.153 2.230 2.940 C15 P9F 24 P9F C14 C19 C 0 1 N N N 10.086 6.719 -15.811 -1.048 1.893 1.936 C14 P9F 25 P9F H1 H1 H 0 1 N N N 11.610 3.057 -20.637 -4.995 -0.317 0.649 H1 P9F 26 P9F H2 H2 H 0 1 N N N 13.244 3.800 -20.676 -5.709 -1.490 -0.483 H2 P9F 27 P9F H3 H3 H 0 1 N N N 9.674 4.245 -21.588 -3.173 -0.961 2.120 H3 P9F 28 P9F H4 H4 H 0 1 N N N 8.911 6.151 -23.031 -2.067 -2.800 3.327 H4 P9F 29 P9F H5 H5 H 0 1 N N N 8.321 3.520 -15.006 0.769 0.037 -2.413 H5 P9F 30 P9F H6 H6 H 0 1 N N N 8.739 5.441 -14.667 -2.377 1.923 0.241 H6 P9F 31 P9F H7 H7 H 0 1 N N N 8.396 6.177 -17.598 -0.573 2.525 -1.415 H7 P9F 32 P9F H8 H8 H 0 1 N N N 7.052 5.450 -16.653 0.610 2.447 -0.087 H8 P9F 33 P9F H9 H9 H 0 1 N N N 13.549 6.111 -21.345 -4.887 -3.771 -0.592 H9 P9F 34 P9F H10 H10 H 0 1 N N N 12.997 7.304 -17.971 -6.153 0.805 -3.117 H10 P9F 35 P9F H11 H11 H 0 1 N N N 12.442 3.547 -18.360 -3.572 -1.446 -1.802 H11 P9F 36 P9F H12 H12 H 0 1 N N N 12.797 7.960 -22.805 -3.784 -5.611 0.618 H12 P9F 37 P9F H13 H13 H 0 1 N N N 10.473 7.978 -23.630 -2.375 -5.125 2.578 H13 P9F 38 P9F H14 H14 H 0 1 N N N 9.980 5.031 -19.130 -2.690 0.331 0.341 H14 P9F 39 P9F H15 H15 H 0 1 N N N 8.160 3.771 -17.954 -0.132 0.079 0.354 H15 P9F 40 P9F H17 H17 H 0 1 N N N 7.400 7.840 -16.019 -0.717 4.396 0.909 H17 P9F 41 P9F H18 H18 H 0 1 N N N 6.836 6.892 -14.601 -1.931 4.280 -0.388 H18 P9F 42 P9F H19 H19 H 0 1 N N N 7.608 9.131 -13.951 -2.892 5.334 1.640 H19 P9F 43 P9F H20 H20 H 0 1 N N N 8.644 7.848 -13.240 -3.680 3.776 1.295 H20 P9F 44 P9F H21 H21 H 0 1 N N N 9.935 9.803 -14.288 -1.422 4.224 3.299 H21 P9F 45 P9F H22 H22 H 0 1 N N N 9.304 9.268 -15.882 -3.139 3.986 3.706 H22 P9F 46 P9F H23 H23 H 0 1 N N N 10.756 7.441 -13.886 -1.869 1.867 3.928 H23 P9F 47 P9F H24 H24 H 0 1 N N N 11.544 8.229 -15.295 -3.083 1.751 2.632 H24 P9F 48 P9F H25 H25 H 0 1 N N N 10.796 5.881 -15.747 -0.907 0.813 1.901 H25 P9F 49 P9F H26 H26 H 0 1 N N N 10.067 7.106 -16.841 -0.119 2.371 2.245 H26 P9F 50 P9F O5 O5 O 0 1 N Y N ? ? ? 3.202 -0.038 -1.728 O5 P9F 51 P9F C20 C20 C 0 1 Y Y N ? ? ? 4.406 -0.189 -1.115 C20 P9F 52 P9F C21 C21 C 0 1 Y Y N ? ? ? 4.718 -1.383 -0.481 C21 P9F 53 P9F C22 C22 C 0 1 Y Y N ? ? ? 5.942 -1.535 0.141 C22 P9F 54 P9F C23 C23 C 0 1 Y Y N ? ? ? 6.857 -0.497 0.132 C23 P9F 55 P9F C24 C24 C 0 1 Y Y N ? ? ? 6.548 0.695 -0.501 C24 P9F 56 P9F C25 C25 C 0 1 Y Y N ? ? ? 5.327 0.848 -1.128 C25 P9F 57 P9F CL1 CL1 CL 0 0 N Y N ? ? ? 8.394 -0.690 0.915 CL1 P9F 58 P9F H16 H16 H 0 1 N Y N ? ? ? 4.003 -2.193 -0.473 H16 P9F 59 P9F H27 H27 H 0 1 N Y N ? ? ? 6.185 -2.464 0.635 H27 P9F 60 P9F H28 H28 H 0 1 N Y N ? ? ? 7.264 1.503 -0.507 H28 P9F 61 P9F H29 H29 H 0 1 N Y N ? ? ? 5.087 1.778 -1.621 H29 P9F 62 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P9F C7 C6 DOUB Y N 1 P9F C7 C8 SING Y N 2 P9F C6 C5 SING Y N 3 P9F C8 C9 DOUB Y N 4 P9F C5 C4 DOUB Y N 5 P9F C9 C4 SING Y N 6 P9F C4 C3 SING N N 7 P9F C3 C2 SING N N 8 P9F C2 C1 SING N N 9 P9F C2 N1 SING N N 10 P9F O1 C1 DOUB N N 11 P9F C1 O4 SING N N 12 P9F N1 C10 SING N N 13 P9F O2 C19 DOUB N N 14 P9F C10 C11 SING N N 15 P9F C10 O3 DOUB N N 16 P9F C11 C12 SING N N 17 P9F C11 N2 SING N N 18 P9F C12 C13 SING N N 19 P9F C19 N2 SING N N 20 P9F C14 C13 SING N N 21 P9F C14 C15 SING N N 22 P9F C13 C18 SING N N 23 P9F C18 C17 SING N N 24 P9F C15 C16 SING N N 25 P9F C16 C17 SING N N 26 P9F C3 H1 SING N N 27 P9F C3 H2 SING N N 28 P9F C5 H3 SING N N 29 P9F C6 H4 SING N N 30 P9F N2 H5 SING N N 31 P9F C13 H6 SING N N 32 P9F C12 H7 SING N N 33 P9F C12 H8 SING N N 34 P9F C9 H9 SING N N 35 P9F O4 H10 SING N N 36 P9F C2 H11 SING N N 37 P9F C8 H12 SING N N 38 P9F C7 H13 SING N N 39 P9F N1 H14 SING N N 40 P9F C11 H15 SING N N 41 P9F C18 H17 SING N N 42 P9F C18 H18 SING N N 43 P9F C17 H19 SING N N 44 P9F C17 H20 SING N N 45 P9F C16 H21 SING N N 46 P9F C16 H22 SING N N 47 P9F C15 H23 SING N N 48 P9F C15 H24 SING N N 49 P9F C14 H25 SING N N 50 P9F C14 H26 SING N N 51 P9F C19 O5 SING N N 52 P9F O5 C20 SING N N 53 P9F C20 C21 SING Y N 54 P9F C21 C22 DOUB Y N 55 P9F C22 C23 SING Y N 56 P9F C23 C24 DOUB Y N 57 P9F C24 C25 SING Y N 58 P9F C25 C20 DOUB Y N 59 P9F C23 CL1 SING N N 60 P9F C21 H16 SING N N 61 P9F C22 H27 SING N N 62 P9F C24 H28 SING N N 63 P9F C25 H29 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P9F InChI InChI 1.06 "InChI=1S/C25H29ClN2O5/c26-19-11-13-20(14-12-19)33-25(32)28-21(15-17-7-3-1-4-8-17)23(29)27-22(24(30)31)16-18-9-5-2-6-10-18/h2,5-6,9-14,17,21-22H,1,3-4,7-8,15-16H2,(H,27,29)(H,28,32)(H,30,31)/t21-,22-/m0/s1" P9F InChIKey InChI 1.06 XQAHEQBJBQAMLZ-VXKWHMMOSA-N P9F SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@H](Cc1ccccc1)NC(=O)[C@H](CC2CCCCC2)NC(=O)Oc3ccc(Cl)cc3" P9F SMILES CACTVS 3.385 "OC(=O)[CH](Cc1ccccc1)NC(=O)[CH](CC2CCCCC2)NC(=O)Oc3ccc(Cl)cc3" P9F SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)C[C@@H](C(=O)O)NC(=O)[C@H](CC2CCCCC2)NC(=O)Oc3ccc(cc3)Cl" P9F SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)CC(C(=O)O)NC(=O)C(CC2CCCCC2)NC(=O)Oc3ccc(cc3)Cl" # _pdbx_chem_comp_identifier.comp_id P9F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 3.1.0.0 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-[[(2~{S})-2-[(4-chloranylphenoxy)carbonylamino]-3-cyclohexyl-propanoyl]amino]-3-phenyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P9F "Create component" 2022-10-04 PDBE P9F "Initial release" 2023-10-04 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id P9F _pdbx_chem_comp_synonyms.name "(2~{S})-2-[[(2~{S})-2-[(4-chloranylphenoxy)carbonylamino]-3-cyclohexyl-propanoyl]amino]-3-phenyl-propanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #