data_P9K # _chem_comp.id P9K _chem_comp.name "N-Methyl-N-(2-{[2-(2-oxo-2,3-dihydro-1H-indol-5-ylamino)-5-trifluoromethyl-pyrimidin-4-ylamino]-methyl}-phenyl)-methanesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H19 F3 N6 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-20 _chem_comp.pdbx_modified_date 2021-02-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 504.485 _chem_comp.one_letter_code ? _chem_comp.three_letter_code P9K _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6YR9 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal P9K C1 C1 C 0 1 Y N N 14.904 -6.606 50.475 -0.327 2.494 0.076 C1 P9K 1 P9K C2 C2 C 0 1 Y N N 13.686 -6.378 49.777 0.461 1.345 0.230 C2 P9K 2 P9K C7 C3 C 0 1 N N N 15.391 -7.969 50.884 0.309 3.839 -0.163 C7 P9K 3 P9K C12 C4 C 0 1 Y N N 12.361 -2.441 49.116 -3.449 -1.264 0.639 C12 P9K 4 P9K C13 C5 C 0 1 Y N N 11.535 -3.191 48.286 -4.179 -0.493 -0.258 C13 P9K 5 P9K C14 C6 C 0 1 Y N N 10.678 -0.711 49.267 -5.479 -2.291 1.405 C14 P9K 6 P9K C15 C7 C 0 1 Y N N 11.931 -1.204 49.598 -4.107 -2.164 1.466 C15 P9K 7 P9K C16 C8 C 0 1 Y N N 9.858 -1.483 48.453 -6.215 -1.516 0.511 C16 P9K 8 P9K C19 C9 C 0 1 N N N 8.076 -2.242 47.243 -7.903 -0.576 -0.692 C19 P9K 9 P9K C24 C10 C 0 1 Y N N 11.045 -8.505 48.115 4.007 0.426 0.267 C24 P9K 10 P9K C27 C11 C 0 1 Y N N 9.560 -10.813 47.594 6.776 0.598 0.362 C27 P9K 11 P9K C32 C12 C 0 1 N N N 11.974 -8.315 44.790 3.860 -2.562 1.786 C32 P9K 12 P9K C34 C13 C 0 1 N N N 13.918 -11.085 45.413 2.161 -2.172 -1.382 C34 P9K 13 P9K N3 N1 N 0 1 Y N N 13.296 -5.141 49.457 -0.141 0.172 0.434 N3 P9K 14 P9K C4 C14 C 0 1 Y N N 14.116 -4.138 49.769 -1.461 0.094 0.490 C4 P9K 15 P9K N5 N2 N 0 1 Y N N 15.301 -4.243 50.387 -2.229 1.165 0.347 N5 P9K 16 P9K C6 C15 C 0 1 Y N N 15.660 -5.477 50.742 -1.701 2.362 0.142 C6 P9K 17 P9K F8 F1 F 0 1 N N N 14.477 -8.664 51.559 -0.689 4.791 -0.399 F8 P9K 18 P9K F9 F2 F 0 1 N N N 15.645 -8.717 49.868 1.051 4.210 0.964 F9 P9K 19 P9K F10 F3 F 0 1 N N N 16.544 -7.937 51.613 1.155 3.764 -1.275 F10 P9K 20 P9K N11 N3 N 0 1 N N N 13.630 -2.891 49.523 -2.056 -1.138 0.704 N11 P9K 21 P9K C17 C16 C 0 1 Y N N 10.273 -2.718 47.967 -5.548 -0.622 -0.317 C17 P9K 22 P9K C18 C17 C 0 1 N N N 9.142 -3.316 47.183 -6.607 0.052 -1.158 C18 P9K 23 P9K N20 N4 N 0 1 N N N 8.562 -1.219 47.998 -7.590 -1.464 0.267 N20 P9K 24 P9K O21 O1 O 0 1 N N N 6.980 -2.259 46.686 -9.015 -0.325 -1.106 O21 P9K 25 P9K N22 N5 N 0 1 N N N 12.931 -7.408 49.347 1.822 1.424 0.172 N22 P9K 26 P9K C23 C18 C 0 1 N N N 11.830 -7.246 48.406 2.543 0.336 0.217 C23 P9K 27 P9K C25 C19 C 0 1 Y N N 10.007 -8.901 48.961 4.639 1.672 0.191 C25 P9K 28 P9K C26 C20 C 0 1 Y N N 9.277 -10.050 48.704 6.013 1.749 0.239 C26 P9K 29 P9K C28 C21 C 0 1 Y N N 10.587 -10.444 46.733 6.168 -0.639 0.442 C28 P9K 30 P9K C29 C22 C 0 1 Y N N 11.334 -9.294 46.992 4.784 -0.739 0.396 C29 P9K 31 P9K N30 N6 N 0 1 N N N 12.379 -8.902 46.081 4.171 -1.982 0.477 N30 P9K 32 P9K S31 S1 S 0 1 N N N 13.904 -9.535 46.231 3.791 -2.810 -0.906 S31 P9K 33 P9K O33 O2 O 0 1 N N N 14.122 -9.765 47.622 3.694 -4.165 -0.489 O33 P9K 34 P9K O35 O3 O 0 1 N N N 14.791 -8.666 45.526 4.779 -2.400 -1.842 O35 P9K 35 P9K H1 H1 H 0 1 N N N 11.876 -4.137 47.892 -3.673 0.207 -0.907 H1 P9K 36 P9K H2 H2 H 0 1 N N N 10.347 0.250 49.633 -5.984 -2.993 2.051 H2 P9K 37 P9K H3 H3 H 0 1 N N N 12.581 -0.624 50.236 -3.542 -2.768 2.161 H3 P9K 38 P9K H4 H4 H 0 1 N N N 8.982 -11.702 47.391 7.853 0.670 0.398 H4 P9K 39 P9K H5 H5 H 0 1 N N N 10.941 -7.945 44.863 4.736 -3.088 2.168 H5 P9K 40 P9K H6 H6 H 0 1 N N N 12.646 -7.481 44.540 3.583 -1.768 2.479 H6 P9K 41 P9K H7 H7 H 0 1 N N N 12.034 -9.082 44.004 3.031 -3.263 1.686 H7 P9K 42 P9K H8 H8 H 0 1 N N N 13.242 -11.780 45.933 2.246 -1.118 -1.648 H8 P9K 43 P9K H9 H9 H 0 1 N N N 13.581 -10.954 44.374 1.786 -2.734 -2.237 H9 P9K 44 P9K H10 H10 H 0 1 N N N 14.939 -11.493 45.419 1.470 -2.281 -0.545 H10 P9K 45 P9K H11 H11 H 0 1 N N N 16.595 -5.603 51.268 -2.338 3.227 0.023 H11 P9K 46 P9K H12 H12 H 0 1 N N N 14.299 -2.159 49.656 -1.507 -1.914 0.898 H12 P9K 47 P9K H13 H13 H 0 1 N N N 8.789 -4.249 47.648 -6.442 -0.153 -2.216 H13 P9K 48 P9K H14 H14 H 0 1 N N N 9.444 -3.515 46.144 -6.615 1.126 -0.974 H14 P9K 49 P9K H15 H15 H 0 1 N N N 8.055 -0.382 48.202 -8.244 -2.007 0.735 H15 P9K 50 P9K H16 H16 H 0 1 N N N 11.592 -6.296 47.950 2.061 -0.631 0.217 H16 P9K 51 P9K H17 H17 H 0 1 N N N 9.770 -8.303 49.828 4.050 2.572 0.096 H17 P9K 52 P9K H18 H18 H 0 1 N N N 8.485 -10.347 49.375 6.499 2.712 0.181 H18 P9K 53 P9K H19 H19 H 0 1 N N N 10.807 -11.047 45.864 6.771 -1.530 0.542 H19 P9K 54 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal P9K C32 N30 SING N N 1 P9K C34 S31 SING N N 2 P9K O35 S31 DOUB N N 3 P9K N30 S31 SING N N 4 P9K N30 C29 SING N N 5 P9K S31 O33 DOUB N N 6 P9K O21 C19 DOUB N N 7 P9K C28 C29 DOUB Y N 8 P9K C28 C27 SING Y N 9 P9K C29 C24 SING Y N 10 P9K C18 C19 SING N N 11 P9K C18 C17 SING N N 12 P9K C19 N20 SING N N 13 P9K C27 C26 DOUB Y N 14 P9K C17 C13 DOUB Y N 15 P9K C17 C16 SING Y N 16 P9K N20 C16 SING N N 17 P9K C24 C23 SING N N 18 P9K C24 C25 DOUB Y N 19 P9K C13 C12 SING Y N 20 P9K C23 N22 DOUB N N 21 P9K C16 C14 DOUB Y N 22 P9K C26 C25 SING Y N 23 P9K C12 N11 SING N N 24 P9K C12 C15 DOUB Y N 25 P9K C14 C15 SING Y N 26 P9K N22 C2 SING N N 27 P9K N3 C4 DOUB Y N 28 P9K N3 C2 SING Y N 29 P9K N11 C4 SING N N 30 P9K C4 N5 SING Y N 31 P9K C2 C1 DOUB Y N 32 P9K F9 C7 SING N N 33 P9K N5 C6 DOUB Y N 34 P9K C1 C6 SING Y N 35 P9K C1 C7 SING N N 36 P9K C7 F8 SING N N 37 P9K C7 F10 SING N N 38 P9K C13 H1 SING N N 39 P9K C14 H2 SING N N 40 P9K C15 H3 SING N N 41 P9K C27 H4 SING N N 42 P9K C32 H5 SING N N 43 P9K C32 H6 SING N N 44 P9K C32 H7 SING N N 45 P9K C34 H8 SING N N 46 P9K C34 H9 SING N N 47 P9K C34 H10 SING N N 48 P9K C6 H11 SING N N 49 P9K N11 H12 SING N N 50 P9K C18 H13 SING N N 51 P9K C18 H14 SING N N 52 P9K N20 H15 SING N N 53 P9K C23 H16 SING N N 54 P9K C25 H17 SING N N 55 P9K C26 H18 SING N N 56 P9K C28 H19 SING N N 57 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor P9K InChI InChI 1.03 "InChI=1S/C22H19F3N6O3S/c1-31(35(2,33)34)18-6-4-3-5-13(18)11-26-20-16(22(23,24)25)12-27-21(30-20)28-15-7-8-17-14(9-15)10-19(32)29-17/h3-9,11-12H,10H2,1-2H3,(H,29,32)(H,27,28,30)/b26-11+" P9K InChIKey InChI 1.03 MONLGZGTNBTOCO-KBKYJPHKSA-N P9K SMILES_CANONICAL CACTVS 3.385 "CN(c1ccccc1C=Nc2nc(Nc3ccc4NC(=O)Cc4c3)ncc2C(F)(F)F)[S](C)(=O)=O" P9K SMILES CACTVS 3.385 "CN(c1ccccc1C=Nc2nc(Nc3ccc4NC(=O)Cc4c3)ncc2C(F)(F)F)[S](C)(=O)=O" P9K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(c1ccccc1/C=N/c2c(cnc(n2)Nc3ccc4c(c3)CC(=O)N4)C(F)(F)F)S(=O)(=O)C" P9K SMILES "OpenEye OEToolkits" 2.0.7 "CN(c1ccccc1C=Nc2c(cnc(n2)Nc3ccc4c(c3)CC(=O)N4)C(F)(F)F)S(=O)(=O)C" # _pdbx_chem_comp_identifier.comp_id P9K _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-methyl-~{N}-[2-[(~{E})-[2-[(2-oxidanylidene-1,3-dihydroindol-5-yl)amino]-5-(trifluoromethyl)pyrimidin-4-yl]iminomethyl]phenyl]methanesulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site P9K "Create component" 2020-04-20 PDBE P9K "Initial release" 2021-02-10 RCSB ##