data_PCP # _chem_comp.id PCP _chem_comp.name "1-ALPHA-PYROPHOSPHORYL-2-ALPHA,3-ALPHA-DIHYDROXY-4-BETA-CYCLOPENTANE-METHANOL-5-PHOSPHATE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H15 O13 P3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "CARBOXYLIC PRPP; CPRPP" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 388.097 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PCP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code "1A96,1A95" _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PCP C1 C1 C 0 1 N N S 21.681 134.368 23.006 0.783 -0.768 0.200 C1 PCP 1 PCP C2 C2 C 0 1 N N R 20.562 133.420 23.459 2.255 -0.738 -0.259 C2 PCP 2 PCP C3 C3 C 0 1 N N R 19.431 133.632 22.410 2.269 -0.071 -1.645 C3 PCP 3 PCP C4 C4 C 0 1 N N R 19.548 135.111 22.009 0.805 0.281 -1.981 C4 PCP 4 PCP C5 C5 C 0 1 N N N 21.018 135.331 22.102 -0.027 -0.699 -1.116 C5 PCP 5 PCP CP CP C 0 1 N N N 18.707 136.109 22.803 0.523 0.056 -3.467 CP PCP 6 PCP O1 O1 O 0 1 N N N 22.612 133.670 22.056 0.494 0.359 1.028 O1 PCP 7 PCP O2 O2 O 0 1 N N N 20.991 132.066 23.550 3.040 0.024 0.659 O2 PCP 8 PCP O3 O3 O 0 1 N N N 19.540 132.836 21.240 3.062 1.116 -1.609 O3 PCP 9 PCP OP OP O 0 1 N N N 19.092 137.483 22.540 -0.858 0.306 -3.733 OP PCP 10 PCP P P P 0 1 N N N 18.036 138.627 22.144 -1.083 0.053 -5.307 P PCP 11 PCP O1P O1P O 0 1 N N N 16.724 138.194 22.685 -0.729 -1.345 -5.637 O1P PCP 12 PCP O2P O2P O 0 1 N N N 18.051 138.690 20.664 -2.627 0.318 -5.678 O2P PCP 13 PCP O3P O3P O 0 1 N N N 18.541 139.869 22.782 -0.148 1.056 -6.151 O3P PCP 14 PCP PA PA P 0 1 N N S 23.880 134.385 21.485 -0.011 -0.218 2.443 PA PCP 15 PCP O1A O1A O 0 1 N N N 24.214 135.485 22.443 1.052 -1.052 3.044 O1A PCP 16 PCP O2A O2A O 0 1 N N N 23.472 134.937 20.154 -1.330 -1.112 2.216 O2A PCP 17 PCP O3A O3A O 0 1 N N N 24.900 133.258 21.430 -0.356 1.005 3.431 O3A PCP 18 PCP PB PB P 0 1 N N N 24.807 131.746 21.311 -0.853 0.358 4.818 PB PCP 19 PCP O1B O1B O 0 1 N N N 24.970 131.283 19.899 0.224 -0.485 5.383 O1B PCP 20 PCP O2B O2B O 0 1 N N N 23.521 131.266 21.775 -1.216 1.532 5.858 O2B PCP 21 PCP O3B O3B O 0 1 N N N 25.847 131.065 22.140 -2.158 -0.545 4.552 O3B PCP 22 PCP H1 H1 H 0 1 N N N 22.207 134.774 23.901 0.568 -1.695 0.732 H1 PCP 23 PCP H2 H2 H 0 1 N N N 20.214 133.646 24.494 2.645 -1.754 -0.329 H2 PCP 24 PCP H3 H3 H 0 1 N N N 18.456 133.338 22.866 2.666 -0.762 -2.388 H3 PCP 25 PCP H4 H4 H 0 1 N N N 19.116 135.304 20.999 0.588 1.312 -1.703 H4 PCP 26 PCP H51 1H5 H 0 1 N N N 21.247 136.381 22.397 -0.081 -1.679 -1.589 H51 PCP 27 PCP H52 2H5 H 0 1 N N N 21.489 135.321 21.091 -1.026 -0.301 -0.935 H52 PCP 28 PCP HP1 1HP H 0 1 N N N 17.618 135.953 22.620 1.135 0.735 -4.060 HP1 PCP 29 PCP HP2 2HP H 0 1 N N N 18.737 135.883 23.894 0.763 -0.973 -3.731 HP2 PCP 30 PCP HO2 HO2 H 0 1 N N N 20.298 131.479 23.830 3.944 0.030 0.316 HO2 PCP 31 PCP HO3 HO3 H 0 1 N N N 18.850 132.965 20.600 3.963 0.844 -1.385 HO3 PCP 32 PCP HOP2 2HOP H 0 0 N N N 17.426 139.366 20.429 -2.718 0.156 -6.627 HOP2 PCP 33 PCP HOP3 3HOP H 0 0 N N N 17.916 140.545 22.547 -0.410 1.954 -5.907 HOP3 PCP 34 PCP HOA2 2HOA H 0 0 N N N 24.242 135.371 19.807 -1.997 -0.532 1.824 HOA2 PCP 35 PCP HOB2 2HOB H 0 0 N N N 23.462 130.320 21.700 -1.509 1.102 6.674 HOB2 PCP 36 PCP HOB3 3HOB H 0 0 N N N 25.788 130.119 22.065 -2.834 0.040 4.185 HOB3 PCP 37 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PCP C1 C2 SING N N 1 PCP C1 C5 SING N N 2 PCP C1 O1 SING N N 3 PCP C1 H1 SING N N 4 PCP C2 C3 SING N N 5 PCP C2 O2 SING N N 6 PCP C2 H2 SING N N 7 PCP C3 C4 SING N N 8 PCP C3 O3 SING N N 9 PCP C3 H3 SING N N 10 PCP C4 C5 SING N N 11 PCP C4 CP SING N N 12 PCP C4 H4 SING N N 13 PCP C5 H51 SING N N 14 PCP C5 H52 SING N N 15 PCP CP OP SING N N 16 PCP CP HP1 SING N N 17 PCP CP HP2 SING N N 18 PCP O1 PA SING N N 19 PCP O2 HO2 SING N N 20 PCP O3 HO3 SING N N 21 PCP OP P SING N N 22 PCP P O1P DOUB N N 23 PCP P O2P SING N N 24 PCP P O3P SING N N 25 PCP O2P HOP2 SING N N 26 PCP O3P HOP3 SING N N 27 PCP PA O1A DOUB N N 28 PCP PA O2A SING N N 29 PCP PA O3A SING N N 30 PCP O2A HOA2 SING N N 31 PCP O3A PB SING N N 32 PCP PB O1B DOUB N N 33 PCP PB O2B SING N N 34 PCP PB O3B SING N N 35 PCP O2B HOB2 SING N N 36 PCP O3B HOB3 SING N N 37 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PCP SMILES ACDLabs 10.04 "O=P(OC1CC(C(O)C1O)COP(=O)(O)O)(O)OP(=O)(O)O" PCP SMILES_CANONICAL CACTVS 3.341 "O[C@H]1[C@@H](O)[C@H](C[C@@H]1CO[P](O)(O)=O)O[P@@](O)(=O)O[P](O)(O)=O" PCP SMILES CACTVS 3.341 "O[CH]1[CH](O)[CH](C[CH]1CO[P](O)(O)=O)O[P](O)(=O)O[P](O)(O)=O" PCP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C1[C@@H]([C@H]([C@H]([C@H]1O[P@](=O)(O)OP(=O)(O)O)O)O)COP(=O)(O)O" PCP SMILES "OpenEye OEToolkits" 1.5.0 "C1C(C(C(C1OP(=O)(O)OP(=O)(O)O)O)O)COP(=O)(O)O" PCP InChI InChI 1.03 "InChI=1S/C6H15O13P3/c7-5-3(2-17-20(9,10)11)1-4(6(5)8)18-22(15,16)19-21(12,13)14/h3-8H,1-2H2,(H,15,16)(H2,9,10,11)(H2,12,13,14)/t3-,4+,5-,6+/m1/s1" PCP InChIKey InChI 1.03 OICBXEWBKALHHB-MOJAZDJTSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PCP "SYSTEMATIC NAME" ACDLabs 10.04 "(1S,2R,3R,4R)-2,3-dihydroxy-4-[(phosphonooxy)methyl]cyclopentyl trihydrogen diphosphate" PCP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1S,2R,3R,4R)-2,3-dihydroxy-4-(phosphonooxymethyl)cyclopentyl] phosphono hydrogen phosphate" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PCP "Create component" 1999-07-08 RCSB PCP "Modify descriptor" 2011-06-04 RCSB PCP "Modify synonyms" 2020-06-05 PDBE # # loop_ _pdbx_chem_comp_synonyms.ordinal _pdbx_chem_comp_synonyms.comp_id _pdbx_chem_comp_synonyms.name _pdbx_chem_comp_synonyms.provenance _pdbx_chem_comp_synonyms.type 1 PCP "CARBOXYLIC PRPP" ? ? 2 PCP CPRPP ? ? ##