data_PDC # _chem_comp.id PDC _chem_comp.name "PYRIDINE-2,6-DICARBOXYLIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H5 N O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "DIPICOLINIC ACID" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 1999-07-08 _chem_comp.pdbx_modified_date 2021-03-01 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 167.119 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PDC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1ARZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PDC N1 N1 N 0 1 Y N N 76.908 56.312 8.629 0.405 0.004 0.000 N1 PDC 1 PDC C2 C2 C 0 1 Y N N 76.420 55.689 7.482 -0.240 -0.000 1.155 C2 PDC 2 PDC C3 C3 C 0 1 Y N N 76.736 54.359 7.212 -1.636 -0.000 1.191 C3 PDC 3 PDC C4 C4 C 0 1 Y N N 77.536 53.636 8.103 -2.344 -0.000 0.000 C4 PDC 4 PDC C5 C5 C 0 1 Y N N 78.002 54.250 9.281 -1.636 0.000 -1.191 C5 PDC 5 PDC C6 C6 C 0 1 Y N N 77.688 55.599 9.549 -0.240 -0.000 -1.155 C6 PDC 6 PDC C7 C7 C 0 1 N N N 75.599 56.419 6.665 0.525 -0.000 2.423 C7 PDC 7 PDC O1 O1 O 0 1 N N N 74.992 55.814 5.649 -0.060 -0.000 3.486 O1 PDC 8 PDC O2 O2 O 0 1 N N N 75.320 57.721 6.922 1.871 -0.000 2.396 O2 PDC 9 PDC C8 C8 C 0 1 N N N 78.112 56.269 10.703 0.525 -0.000 -2.423 C8 PDC 10 PDC O3 O3 O 0 1 N N N 78.619 55.586 11.763 -0.060 -0.000 -3.486 O3 PDC 11 PDC O4 O4 O 0 1 N N N 77.906 57.568 10.827 1.871 -0.000 -2.396 O4 PDC 12 PDC H3 H3 H 0 1 N N N 76.353 53.879 6.295 -2.158 -0.001 2.136 H3 PDC 13 PDC H4 H4 H 0 1 N N N 77.797 52.588 7.878 -3.424 -0.000 0.000 H4 PDC 14 PDC H5 H5 H 0 1 N N N 78.613 53.673 9.994 -2.158 -0.000 -2.136 H5 PDC 15 PDC HO2 HO2 H 0 1 N N N 74.750 58.227 6.355 2.371 -0.000 3.224 HO2 PDC 16 PDC HO4 HO4 H 0 1 N N N 78.193 58.022 11.610 2.371 -0.000 -3.224 HO4 PDC 17 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PDC N1 C2 DOUB Y N 1 PDC N1 C6 SING Y N 2 PDC C2 C3 SING Y N 3 PDC C2 C7 SING N N 4 PDC C3 C4 DOUB Y N 5 PDC C3 H3 SING N N 6 PDC C4 C5 SING Y N 7 PDC C4 H4 SING N N 8 PDC C5 C6 DOUB Y N 9 PDC C5 H5 SING N N 10 PDC C6 C8 SING N N 11 PDC C7 O1 DOUB N N 12 PDC C7 O2 SING N N 13 PDC O2 HO2 SING N N 14 PDC C8 O3 DOUB N N 15 PDC C8 O4 SING N N 16 PDC O4 HO4 SING N N 17 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PDC SMILES ACDLabs 10.04 "O=C(O)c1nc(C(=O)O)ccc1" PDC SMILES_CANONICAL CACTVS 3.341 "OC(=O)c1cccc(n1)C(O)=O" PDC SMILES CACTVS 3.341 "OC(=O)c1cccc(n1)C(O)=O" PDC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1cc(nc(c1)C(=O)O)C(=O)O" PDC SMILES "OpenEye OEToolkits" 1.5.0 "c1cc(nc(c1)C(=O)O)C(=O)O" PDC InChI InChI 1.03 "InChI=1S/C7H5NO4/c9-6(10)4-2-1-3-5(8-4)7(11)12/h1-3H,(H,9,10)(H,11,12)" PDC InChIKey InChI 1.03 WJJMNDUMQPNECX-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PDC "SYSTEMATIC NAME" ACDLabs 10.04 "pyridine-2,6-dicarboxylic acid" PDC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "pyridine-2,6-dicarboxylic acid" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PDC "Create component" 1999-07-08 EBI PDC "Modify descriptor" 2011-06-04 RCSB PDC "Modify synonyms" 2021-03-01 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id PDC _pdbx_chem_comp_synonyms.name "DIPICOLINIC ACID" _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##