data_PFD # _chem_comp.id PFD _chem_comp.name "5-(2-ETHOXYETHYL)-5-[4-(4-FLUOROPHENOXY)PHENOXY]PYRIMIDINE-2,4,6(1H,3H,5H)-TRIONE" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H19 F N2 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2005-02-07 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 402.373 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PFD _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1YOU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PFD F29 F29 F 0 1 N N N 69.660 55.552 24.989 2.709 0.298 -7.067 F29 PFD 1 PFD C28 C28 C 0 1 Y N N 68.531 55.801 24.348 1.706 0.108 -6.183 C28 PFD 2 PFD C26 C26 C 0 1 Y N N 68.276 57.077 23.863 1.949 0.227 -4.825 C26 PFD 3 PFD C24 C24 C 0 1 Y N N 67.086 57.279 23.180 0.924 0.034 -3.919 C24 PFD 4 PFD C27 C27 C 0 1 Y N N 67.638 54.748 24.186 0.435 -0.206 -6.635 C27 PFD 5 PFD C25 C25 C 0 1 Y N N 66.446 54.972 23.510 -0.590 -0.405 -5.731 C25 PFD 6 PFD C23 C23 C 0 1 Y N N 66.180 56.233 23.012 -0.349 -0.280 -4.371 C23 PFD 7 PFD O22 O22 O 0 1 N N N 65.010 56.464 22.345 -1.358 -0.471 -3.481 O22 PFD 8 PFD C20 C20 C 0 1 Y N N 63.779 56.291 22.913 -0.854 -0.192 -2.249 C20 PFD 9 PFD C16 C16 C 0 1 Y N N 63.645 56.167 24.304 -0.227 -1.187 -1.515 C16 PFD 10 PFD C12 C12 C 0 1 Y N N 62.350 55.986 24.845 0.284 -0.904 -0.263 C12 PFD 11 PFD C17 C17 C 0 1 Y N N 62.639 56.227 22.091 -0.968 1.088 -1.727 C17 PFD 12 PFD C13 C13 C 0 1 Y N N 61.360 56.056 22.662 -0.461 1.369 -0.473 C13 PFD 13 PFD C6 C6 C 0 1 Y N N 61.173 55.920 24.065 0.170 0.375 0.258 C6 PFD 14 PFD O2 O2 O 0 1 N N N 59.893 55.686 24.674 0.674 0.655 1.490 O2 PFD 15 PFD C1 C1 C 0 1 N N N 58.917 54.657 24.208 -0.372 0.405 2.430 C1 PFD 16 PFD C5 C5 C 0 1 N N N 57.753 54.232 25.150 0.162 0.725 3.828 C5 PFD 17 PFD C11 C11 C 0 1 N N N 57.319 55.239 26.219 1.408 -0.119 4.102 C11 PFD 18 PFD O15 O15 O 0 1 N N N 56.780 54.619 27.399 1.980 0.267 5.353 O15 PFD 19 PFD C19 C19 C 0 1 N N N 57.323 55.125 28.648 3.133 -0.551 5.552 C19 PFD 20 PFD C21 C21 C 0 1 N N N 57.311 54.090 29.773 3.796 -0.186 6.882 C21 PFD 21 PFD C4 C4 C 0 1 N N N 59.548 53.310 23.871 -1.512 1.360 2.132 C4 PFD 22 PFD O10 O10 O 0 1 N N N 60.088 52.617 24.751 -1.341 2.561 2.148 O10 PFD 23 PFD N9 N9 N 0 1 N N N 59.522 52.792 22.608 -2.716 0.830 1.846 N9 PFD 24 PFD C14 C14 C 0 1 N N N 58.910 53.450 21.618 -2.918 -0.491 1.825 C14 PFD 25 PFD O18 O18 O 0 1 N N N 58.921 52.907 20.397 -4.037 -0.886 1.560 O18 PFD 26 PFD N7 N7 N 0 1 N N N 58.354 54.643 21.784 -1.980 -1.411 2.076 N7 PFD 27 PFD C3 C3 C 0 1 N N N 58.300 55.257 22.965 -0.709 -1.072 2.380 C3 PFD 28 PFD O8 O8 O 0 1 N N N 57.724 56.358 23.027 0.130 -1.917 2.606 O8 PFD 29 PFD H26 H26 H 0 1 N N N 68.993 57.901 24.015 2.940 0.472 -4.473 H26 PFD 30 PFD H24 H24 H 0 1 N N N 66.859 58.277 22.768 1.114 0.128 -2.860 H24 PFD 31 PFD H27 H27 H 0 1 N N N 67.872 53.748 24.589 0.247 -0.298 -7.694 H27 PFD 32 PFD H25 H25 H 0 1 N N N 65.717 54.156 23.370 -1.580 -0.650 -6.084 H25 PFD 33 PFD H16 H16 H 0 1 N N N 64.534 56.211 24.955 -0.138 -2.184 -1.921 H16 PFD 34 PFD H12 H12 H 0 1 N N N 62.252 55.891 25.940 0.772 -1.679 0.308 H12 PFD 35 PFD H17 H17 H 0 1 N N N 62.748 56.311 20.997 -1.457 1.863 -2.298 H17 PFD 36 PFD H13 H13 H 0 1 N N N 60.483 56.028 21.994 -0.550 2.366 -0.066 H13 PFD 37 PFD H51 1H5 H 0 1 N N N 58.004 53.260 25.635 -0.602 0.496 4.570 H51 PFD 38 PFD H52 2H5 H 0 1 N N N 56.869 53.936 24.538 0.420 1.782 3.886 H52 PFD 39 PFD H111 1H11 H 0 0 N N N 56.600 55.979 25.797 2.136 0.038 3.306 H111 PFD 40 PFD H112 2H11 H 0 0 N N N 58.158 55.925 26.480 1.132 -1.173 4.139 H112 PFD 41 PFD H191 1H19 H 0 0 N N N 56.797 56.057 28.961 3.839 -0.389 4.737 H191 PFD 42 PFD H192 2H19 H 0 0 N N N 58.349 55.535 28.497 2.835 -1.600 5.570 H192 PFD 43 PFD H211 1H21 H 0 0 N N N 57.837 53.158 29.460 4.676 -0.811 7.033 H211 PFD 44 PFD H212 2H21 H 0 0 N N N 57.728 54.478 30.732 4.094 0.861 6.863 H212 PFD 45 PFD H213 3H21 H 0 0 N N N 56.285 53.680 29.924 3.090 -0.349 7.696 H213 PFD 46 PFD HN9 HN9 H 0 1 N N N 59.967 51.898 22.401 -3.458 1.423 1.651 HN9 PFD 47 PFD HN7 HN7 H 0 1 N N N 57.951 55.107 20.970 -2.220 -2.351 2.038 HN7 PFD 48 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PFD F29 C28 SING N N 1 PFD C28 C26 DOUB Y N 2 PFD C28 C27 SING Y N 3 PFD C26 C24 SING Y N 4 PFD C26 H26 SING N N 5 PFD C24 C23 DOUB Y N 6 PFD C24 H24 SING N N 7 PFD C27 C25 DOUB Y N 8 PFD C27 H27 SING N N 9 PFD C25 C23 SING Y N 10 PFD C25 H25 SING N N 11 PFD C23 O22 SING N N 12 PFD O22 C20 SING N N 13 PFD C20 C16 DOUB Y N 14 PFD C20 C17 SING Y N 15 PFD C16 C12 SING Y N 16 PFD C16 H16 SING N N 17 PFD C12 C6 DOUB Y N 18 PFD C12 H12 SING N N 19 PFD C17 C13 DOUB Y N 20 PFD C17 H17 SING N N 21 PFD C13 C6 SING Y N 22 PFD C13 H13 SING N N 23 PFD C6 O2 SING N N 24 PFD O2 C1 SING N N 25 PFD C1 C5 SING N N 26 PFD C1 C4 SING N N 27 PFD C1 C3 SING N N 28 PFD C5 C11 SING N N 29 PFD C5 H51 SING N N 30 PFD C5 H52 SING N N 31 PFD C11 O15 SING N N 32 PFD C11 H111 SING N N 33 PFD C11 H112 SING N N 34 PFD O15 C19 SING N N 35 PFD C19 C21 SING N N 36 PFD C19 H191 SING N N 37 PFD C19 H192 SING N N 38 PFD C21 H211 SING N N 39 PFD C21 H212 SING N N 40 PFD C21 H213 SING N N 41 PFD C4 O10 DOUB N N 42 PFD C4 N9 SING N N 43 PFD N9 C14 SING N N 44 PFD N9 HN9 SING N N 45 PFD C14 O18 DOUB N N 46 PFD C14 N7 SING N N 47 PFD N7 C3 SING N N 48 PFD N7 HN7 SING N N 49 PFD C3 O8 DOUB N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PFD SMILES ACDLabs 10.04 "O=C3NC(=O)NC(=O)C3(Oc2ccc(Oc1ccc(F)cc1)cc2)CCOCC" PFD SMILES_CANONICAL CACTVS 3.341 "CCOCCC1(Oc2ccc(Oc3ccc(F)cc3)cc2)C(=O)NC(=O)NC1=O" PFD SMILES CACTVS 3.341 "CCOCCC1(Oc2ccc(Oc3ccc(F)cc3)cc2)C(=O)NC(=O)NC1=O" PFD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CCOCCC1(C(=O)NC(=O)NC1=O)Oc2ccc(cc2)Oc3ccc(cc3)F" PFD SMILES "OpenEye OEToolkits" 1.5.0 "CCOCCC1(C(=O)NC(=O)NC1=O)Oc2ccc(cc2)Oc3ccc(cc3)F" PFD InChI InChI 1.03 "InChI=1S/C20H19FN2O6/c1-2-27-12-11-20(17(24)22-19(26)23-18(20)25)29-16-9-7-15(8-10-16)28-14-5-3-13(21)4-6-14/h3-10H,2,11-12H2,1H3,(H2,22,23,24,25,26)" PFD InChIKey InChI 1.03 XRSYNYGEEYTXJV-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PFD "SYSTEMATIC NAME" ACDLabs 10.04 "5-(2-ethoxyethyl)-5-[4-(4-fluorophenoxy)phenoxy]pyrimidine-2,4,6(1H,3H,5H)-trione" PFD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "5-(2-ethoxyethyl)-5-[4-(4-fluorophenoxy)phenoxy]-1,3-diazinane-2,4,6-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PFD "Create component" 2005-02-07 RCSB PFD "Modify descriptor" 2011-06-04 RCSB #