data_PHV # _chem_comp.id PHV _chem_comp.name "N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-[(1S)-4-methoxy-1-phosphonobutyl]-L-prolinamide" _chem_comp.type peptide-like _chem_comp.pdbx_type HETAIN _chem_comp.formula "C33 H40 N3 O8 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2011-03-21 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 637.660 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PHV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1H8I _chem_comp.pdbx_subcomponent_list "PHQ 00O PRO 02F" _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PHV C14 C14 C 0 1 N N N N N N 12.778 -17.835 12.338 -3.392 -0.755 0.451 C1 PHQ 1 PHV O14 O14 O 0 1 N N N N N N 11.943 -18.513 12.953 -4.116 0.090 0.937 O1 PHQ 2 PHV O15 O15 O 0 1 N N N N N N 14.154 -18.088 12.302 -3.852 -2.006 0.257 O2 PHQ 3 PHV C16 C16 C 0 1 N N N N N N 14.579 -19.108 13.174 -5.224 -2.272 0.652 C2 PHQ 4 PHV C41 C41 C 0 1 Y N N N N N 15.407 -18.590 14.357 -5.559 -3.712 0.362 C3 PHQ 5 PHV C42 C42 C 0 1 Y N N N N N 15.374 -17.241 14.701 -5.339 -4.680 1.323 C4 PHQ 6 PHV C43 C43 C 0 1 Y N N N N N 16.239 -16.715 15.660 -5.647 -6.001 1.057 C5 PHQ 7 PHV C44 C44 C 0 1 Y N N N N N 17.156 -17.559 16.287 -6.176 -6.354 -0.170 C6 PHQ 8 PHV C45 C45 C 0 1 Y N N N N N 17.197 -18.914 15.958 -6.397 -5.386 -1.132 C7 PHQ 9 PHV C46 C46 C 0 1 Y N N N N N 16.330 -19.432 15.000 -6.093 -4.064 -0.864 C8 PHQ 10 PHV C22 C22 C 0 1 Y N N N N N 8.698 -14.063 9.941 -4.192 2.547 0.100 C37 00O 11 PHV C23 C23 C 0 1 Y N N N N N 7.409 -13.539 9.892 -5.568 2.671 0.047 C26 00O 12 PHV C24 C24 C 0 1 Y N N N N N 6.421 -14.245 10.615 -6.264 2.179 -1.041 C25 00O 13 PHV C25 C25 C 0 1 Y N N N N N 6.746 -15.395 11.314 -5.585 1.563 -2.076 C34 00O 14 PHV C26 C26 C 0 1 Y N N N N N 8.050 -15.912 11.347 -4.209 1.444 -2.024 C23 00O 15 PHV C21 C21 C 0 1 Y N N N N N 9.035 -15.205 10.632 -3.513 1.931 -0.934 C7 00O 16 PHV C12 C12 C 0 1 N N N N N N 10.518 -15.638 10.683 -2.013 1.796 -0.875 CB 00O 17 PHV C11 C11 C 0 1 N N R N N N 11.028 -15.936 12.090 -1.626 0.919 0.317 CA 00O 18 PHV C10 C10 C 0 1 N N N N N N 11.215 -14.635 12.877 -0.126 0.887 0.451 C 00O 19 PHV O10 O10 O 0 1 N N N N N N 12.022 -13.761 12.477 0.547 0.338 -0.396 O 00O 20 PHV N13 N13 N 0 1 N N N N N N 12.396 -16.454 12.055 -2.127 -0.442 0.106 N 00O 21 PHV C31 C31 C 0 1 Y N N N N N 10.677 -16.872 9.788 -1.391 3.159 -0.719 C1 00O 22 PHV C36 C36 C 0 1 Y N N N N N 11.091 -16.746 8.462 -1.573 3.872 0.452 C6 00O 23 PHV C35 C35 C 0 1 Y N N N N N 11.119 -17.858 7.605 -0.998 5.120 0.598 C5 00O 24 PHV C34 C34 C 0 1 Y N N N N N 10.721 -19.100 8.108 -0.250 5.661 -0.431 C4 00O 25 PHV C33 C33 C 0 1 Y N N N N N 10.291 -19.227 9.433 -0.073 4.951 -1.604 C3 00O 26 PHV C32 C32 C 0 1 Y N N N N N 10.272 -18.114 10.292 -0.644 3.701 -1.748 C2 00O 27 PHV N9 N9 N 0 1 N N N N N N 10.185 -14.203 13.802 0.469 1.467 1.513 N PRO 28 PHV C8 C8 C 0 1 N N S N N N 10.349 -12.862 14.417 1.923 1.609 1.712 CA PRO 29 PHV C7 C7 C 0 1 N N N N N N 11.803 -12.700 14.951 2.644 0.390 1.199 C PRO 30 PHV O7 O7 O 0 1 N N N N N N 12.293 -13.671 15.560 2.096 -0.692 1.218 O PRO 31 PHV C8A C8A C 0 1 N N N N N N 9.279 -12.891 15.514 2.102 1.737 3.245 CB PRO 32 PHV C8B C8B C 0 1 N N N N N N 8.333 -14.019 15.062 0.858 2.577 3.636 CG PRO 33 PHV C8C C8C C 0 1 N N N N N N 9.388 -15.092 14.676 -0.225 2.063 2.664 CD PRO 34 PHV P P P 0 1 N N N N N N 13.252 -10.275 17.243 4.607 -0.468 -1.692 P 02F 35 PHV C1 C1 C 0 1 N N N N N N 15.995 -14.292 13.772 10.096 -3.419 0.429 C1 02F 36 PHV C2 C2 C 0 1 N N N N N N 16.740 -12.017 13.965 8.105 -2.092 0.573 C2 02F 37 PHV O2 O2 O 0 1 N N N N N N 16.728 -13.208 13.203 8.750 -3.226 -0.010 O2 02F 38 PHV C3 C3 C 0 1 N N N N N N 15.341 -11.430 14.010 6.677 -1.984 0.034 C3 02F 39 PHV C4 C4 C 0 1 N N N N N N 14.702 -11.977 15.351 5.987 -0.770 0.659 C4 02F 40 PHV C5 C5 C 0 1 N N S N N N 13.624 -10.915 15.619 4.559 -0.662 0.120 C5 02F 41 PHV N6 N6 N 0 1 N N N N N N 12.340 -11.371 15.035 3.898 0.501 0.719 N6 02F 42 PHV OP1 O1A O 0 1 N N N N N N 11.995 -10.990 18.175 5.518 0.644 -2.045 OP1 02F 43 PHV OP2 O1B O 0 1 N N N N N N 14.662 -10.170 17.990 5.138 -1.831 -2.364 OP2 02F 44 PHV OP3 O1C O 0 1 N Y N N N N 12.803 -8.615 17.284 3.127 -0.143 -2.236 OP3 02F 45 PHV H16 H16 H 0 1 N N N N N N 13.687 -19.612 13.574 -5.339 -2.079 1.718 H21 PHQ 46 PHV H16A H16A H 0 0 N N N N N N 15.201 -19.812 12.602 -5.896 -1.622 0.091 H22 PHQ 47 PHV H42 H42 H 0 1 N N N N N N 14.664 -16.589 14.215 -4.925 -4.405 2.282 H41 PHQ 48 PHV H43 H43 H 0 1 N N N N N N 16.199 -15.666 15.914 -5.473 -6.758 1.808 H51 PHQ 49 PHV H44 H44 H 0 1 N N N N N N 17.835 -17.163 17.028 -6.416 -7.386 -0.379 H61 PHQ 50 PHV H45 H45 H 0 1 N N N N N N 17.905 -19.565 16.449 -6.810 -5.661 -2.091 H71 PHQ 51 PHV H46 H46 H 0 1 N N N N N N 16.367 -20.482 14.751 -6.270 -3.307 -1.614 H81 PHQ 52 PHV H22 H22 H 0 1 N N N N N N 9.479 -13.543 9.406 -3.648 2.932 0.950 H37 00O 53 PHV H23 H23 H 0 1 N N N N N N 7.177 -12.644 9.333 -6.099 3.152 0.855 H26 00O 54 PHV H24 H24 H 0 1 N N N N N N 5.403 -13.884 10.622 -7.339 2.275 -1.082 H25 00O 55 PHV H25 H25 H 0 1 N N N N N N 5.967 -15.913 11.854 -6.129 1.178 -2.925 H34 00O 56 PHV H26 H26 H 0 1 N N N N N N 8.287 -16.811 11.896 -3.678 0.966 -2.834 H23 00O 57 PHV H12 H12 H 0 1 N N N N N N 11.128 -14.795 10.326 -1.654 1.336 -1.796 HB1 00O 58 PHV H11 H11 H 0 1 N N N N N N 10.298 -16.633 12.527 -2.064 1.330 1.227 HA 00O 59 PHV HN13 HN13 H 0 0 N N N N N N 13.126 -15.813 11.819 -1.548 -1.117 -0.282 H 00O 60 PHV H36 H36 H 0 1 N N N N N N 11.394 -15.779 8.089 -2.157 3.449 1.256 H6 00O 61 PHV H35 H35 H 0 1 N N N N N N 11.441 -17.756 6.579 -1.135 5.674 1.514 H5 00O 62 PHV H34 H34 H 0 1 N N N N N N 10.746 -19.969 7.468 0.196 6.638 -0.319 H4 00O 63 PHV H33 H33 H 0 1 N N N N N N 9.970 -20.191 9.800 0.511 5.374 -2.408 H3 00O 64 PHV H32 H32 H 0 1 N N N N N N 9.952 -18.215 11.319 -0.505 3.146 -2.664 H2A 00O 65 PHV H8 H8 H 0 1 N N N N N N 10.218 -12.004 13.741 2.290 2.505 1.211 HA PRO 66 PHV H8A H8A H 0 1 N N N N N N 9.718 -13.103 16.500 2.079 0.758 3.724 HB2 PRO 67 PHV H8AA H8AA H 0 0 N N N N N N 8.752 -11.928 15.590 3.024 2.266 3.488 HB3 PRO 68 PHV H8B H8B H 0 1 N N N N N N 7.651 -14.353 15.858 0.571 2.384 4.669 HG2 PRO 69 PHV H8BA H8BA H 0 0 N N N N N N 7.688 -13.728 14.220 1.046 3.639 3.481 HG3 PRO 70 PHV H8C H8C H 0 1 N N N N N N 8.973 -15.975 14.168 -0.849 2.893 2.331 HD2 PRO 71 PHV H8CA H8CA H 0 0 N N N N N N 9.945 -15.509 15.528 -0.839 1.310 3.157 HD3 PRO 72 PHV H1 H1 H 0 1 N N N N N N 16.050 -15.164 13.103 10.109 -3.562 1.509 H1 02F 73 PHV H1A H1A H 0 1 N N N N N N 16.426 -14.553 14.750 10.515 -4.299 -0.060 H1A 02F 74 PHV H1B H1B H 0 1 N N N N N N 14.944 -13.995 13.902 10.691 -2.543 0.171 H1B 02F 75 PHV H2 H2 H 0 1 N N N N N N 17.427 -11.293 13.502 8.077 -2.208 1.657 H2 02F 76 PHV H2A H2A H 0 1 N N N N N N 17.077 -12.240 14.988 8.659 -1.189 0.319 H2A 02F 77 PHV H3 H3 H 0 1 N N N N N N 15.377 -10.331 14.012 6.706 -1.868 -1.049 H3 02F 78 PHV H3A H3A H 0 1 N N N N N N 14.753 -11.749 13.137 6.124 -2.888 0.289 H3A 02F 79 PHV H4 H4 H 0 1 N N N N N N 14.277 -12.984 15.232 5.959 -0.886 1.743 H4 02F 80 PHV H4A H4A H 0 1 N N N N N N 15.436 -12.044 16.168 6.541 0.134 0.405 H4A 02F 81 PHV H5 H5 H 0 1 N N N N N N 14.127 -10.052 15.158 4.005 -1.565 0.375 H5 02F 82 PHV HN6 HN6 H 0 1 N N N N N N 11.767 -10.651 14.644 4.363 1.350 0.769 HN6 02F 83 PHV HOP2 HO1B H 0 0 N N N N N N 14.585 -10.532 18.865 4.588 -2.604 -2.174 HOP2 02F 84 PHV HOP3 HO1C H 0 0 N Y N N N N 12.006 -8.515 17.791 3.077 -0.027 -3.194 HOP3 02F 85 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PHV P OP2 SING N N 1 PHV P OP1 DOUB N N 2 PHV C2 C3 SING N N 3 PHV O2 C1 SING N N 4 PHV O2 C2 SING N N 5 PHV C3 C4 SING N N 6 PHV C4 C5 SING N N 7 PHV C5 P SING N N 8 PHV N6 C5 SING N N 9 PHV C7 N6 SING N N 10 PHV C7 O7 DOUB N N 11 PHV C8 C7 SING N N 12 PHV C8 C8A SING N N 13 PHV N9 C8 SING N N 14 PHV N9 C8C SING N N 15 PHV C10 N9 SING N N 16 PHV O10 C10 DOUB N N 17 PHV C11 C10 SING N N 18 PHV C12 C11 SING N N 19 PHV N13 C11 SING N N 20 PHV N13 C14 SING N N 21 PHV C14 O14 DOUB N N 22 PHV O15 C14 SING N N 23 PHV O15 C16 SING N N 24 PHV C16 C41 SING N N 25 PHV C21 C12 SING N N 26 PHV C21 C26 SING Y N 27 PHV C22 C21 DOUB Y N 28 PHV C23 C22 SING Y N 29 PHV C23 C24 DOUB Y N 30 PHV C24 C25 SING Y N 31 PHV C25 C26 DOUB Y N 32 PHV C31 C12 SING N N 33 PHV C31 C32 SING Y N 34 PHV C33 C32 DOUB Y N 35 PHV C34 C33 SING Y N 36 PHV C35 C34 DOUB Y N 37 PHV C35 C36 SING Y N 38 PHV C36 C31 DOUB Y N 39 PHV C41 C42 DOUB Y N 40 PHV C41 C46 SING Y N 41 PHV C42 C43 SING Y N 42 PHV C43 C44 DOUB Y N 43 PHV C45 C44 SING Y N 44 PHV C46 C45 DOUB Y N 45 PHV C8B C8A SING N N 46 PHV C8C C8B SING N N 47 PHV P OP3 SING N N 48 PHV C1 H1 SING N N 49 PHV C1 H1A SING N N 50 PHV C1 H1B SING N N 51 PHV C2 H2 SING N N 52 PHV C2 H2A SING N N 53 PHV C3 H3 SING N N 54 PHV C3 H3A SING N N 55 PHV C4 H4 SING N N 56 PHV C4 H4A SING N N 57 PHV C5 H5 SING N N 58 PHV N6 HN6 SING N N 59 PHV C8 H8 SING N N 60 PHV C11 H11 SING N N 61 PHV C12 H12 SING N N 62 PHV N13 HN13 SING N N 63 PHV C16 H16 SING N N 64 PHV C16 H16A SING N N 65 PHV OP2 HOP2 SING N N 66 PHV C22 H22 SING N N 67 PHV C23 H23 SING N N 68 PHV C24 H24 SING N N 69 PHV C25 H25 SING N N 70 PHV C26 H26 SING N N 71 PHV C32 H32 SING N N 72 PHV C33 H33 SING N N 73 PHV C34 H34 SING N N 74 PHV C35 H35 SING N N 75 PHV C36 H36 SING N N 76 PHV C42 H42 SING N N 77 PHV C43 H43 SING N N 78 PHV C44 H44 SING N N 79 PHV C45 H45 SING N N 80 PHV C46 H46 SING N N 81 PHV C8A H8A SING N N 82 PHV C8A H8AA SING N N 83 PHV C8B H8B SING N N 84 PHV C8B H8BA SING N N 85 PHV C8C H8C SING N N 86 PHV C8C H8CA SING N N 87 PHV OP3 HOP3 SING N N 88 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PHV SMILES ACDLabs 12.01 "O=C(NC(CCCOC)P(=O)(O)O)C4N(C(=O)C(NC(=O)OCc1ccccc1)C(c2ccccc2)c3ccccc3)CCC4" PHV SMILES_CANONICAL CACTVS 3.370 "COCCC[C@@H](NC(=O)[C@@H]1CCCN1C(=O)[C@H](NC(=O)OCc2ccccc2)C(c3ccccc3)c4ccccc4)[P](O)(O)=O" PHV SMILES CACTVS 3.370 "COCCC[CH](NC(=O)[CH]1CCCN1C(=O)[CH](NC(=O)OCc2ccccc2)C(c3ccccc3)c4ccccc4)[P](O)(O)=O" PHV SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "COCCC[C@@H](NC(=O)[C@@H]1CCCN1C(=O)[C@@H](C(c2ccccc2)c3ccccc3)NC(=O)OCc4ccccc4)P(=O)(O)O" PHV SMILES "OpenEye OEToolkits" 1.7.0 "COCCCC(NC(=O)C1CCCN1C(=O)C(C(c2ccccc2)c3ccccc3)NC(=O)OCc4ccccc4)P(=O)(O)O" PHV InChI InChI 1.03 "InChI=1S/C33H40N3O8P/c1-43-22-12-20-28(45(40,41)42)34-31(37)27-19-11-21-36(27)32(38)30(35-33(39)44-23-24-13-5-2-6-14-24)29(25-15-7-3-8-16-25)26-17-9-4-10-18-26/h2-10,13-18,27-30H,11-12,19-23H2,1H3,(H,34,37)(H,35,39)(H2,40,41,42)/t27-,28-,30+/m0/s1" PHV InChIKey InChI 1.03 RQOYKJRZXWFGEE-TWLDFKIOSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PHV "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-[(1S)-4-methoxy-1-phosphonobutyl]-L-prolinamide" PHV "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[(1S)-1-[[(2S)-1-[(2R)-3,3-diphenyl-2-(phenylmethoxycarbonylamino)propanoyl]pyrrolidin-2-yl]carbonylamino]-4-methoxy-butyl]phosphonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PHV "Create component" 2011-03-21 RCSB PHV "Modify subcomponent list" 2011-04-06 RCSB PHV "Modify aromatic_flag" 2011-06-04 RCSB PHV "Modify descriptor" 2011-06-04 RCSB PHV "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id PHV _pdbx_chem_comp_pcm.modified_residue_id SER _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom P _pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #