data_PKE # _chem_comp.id PKE _chem_comp.name "~{N}-methyl-~{N}-[3-[[[2-[(2-oxidanylidene-1,3-dihydroindol-5-yl)amino]pyrimidin-4-yl]amino]methyl]pyridin-2-yl]methanesulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H21 N7 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2020-04-24 _chem_comp.pdbx_modified_date 2021-02-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.491 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PKE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 6YT6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBE # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PKE C2 C1 C 0 1 Y N N -1.718 -3.806 18.916 -1.729 0.607 0.049 C2 PKE 1 PKE C9 C2 C 0 1 N N N -0.047 -6.545 21.499 2.932 1.124 -0.843 C9 PKE 2 PKE C10 C3 C 0 1 Y N N -0.899 -7.761 21.238 4.208 1.418 -0.097 C10 PKE 3 PKE C11 C4 C 0 1 Y N N -0.773 -8.516 20.077 4.746 2.692 -0.101 C11 PKE 4 PKE C12 C5 C 0 1 Y N N -1.597 -9.606 19.862 5.923 2.917 0.600 C12 PKE 5 PKE C13 C6 C 0 1 Y N N -2.537 -9.922 20.816 6.519 1.871 1.275 C13 PKE 6 PKE C15 C7 C 0 1 Y N N -1.887 -8.188 22.145 4.859 0.411 0.610 C15 PKE 7 PKE C20 C8 C 0 1 N N N -2.023 -9.342 25.343 6.250 -2.815 0.380 C20 PKE 8 PKE C22 C9 C 0 1 Y N N -3.654 -3.041 20.385 -4.094 0.467 0.500 C22 PKE 9 PKE C24 C10 C 0 1 Y N N -4.553 -3.949 22.437 -5.771 0.902 -1.161 C24 PKE 10 PKE C27 C11 C 0 1 Y N N -5.195 -1.737 21.687 -6.325 -0.343 0.813 C27 PKE 11 PKE N1 N1 N 0 1 Y N N -1.147 -4.633 19.808 -0.500 0.842 0.484 N1 PKE 12 PKE N3 N2 N 0 1 Y N N -1.259 -3.514 17.691 -1.980 0.374 -1.231 N3 PKE 13 PKE C4 C12 C 0 1 Y N N -0.111 -4.111 17.351 -1.004 0.373 -2.127 C4 PKE 14 PKE C5 C13 C 0 1 Y N N 0.575 -4.973 18.178 0.292 0.618 -1.716 C5 PKE 15 PKE C6 C14 C 0 1 Y N N 0.001 -5.207 19.423 0.526 0.856 -0.360 C6 PKE 16 PKE N7 N3 N 0 1 N N N 0.608 -6.040 20.308 1.810 1.106 0.098 N7 PKE 17 PKE N8 N4 N 0 1 N N N -2.854 -3.131 19.236 -2.776 0.599 0.955 N8 PKE 18 PKE N14 N5 N 0 1 Y N N -2.700 -9.235 21.955 5.984 0.665 1.262 N14 PKE 19 PKE N16 N6 N 0 1 N N N -2.056 -7.457 23.375 4.327 -0.873 0.627 N16 PKE 20 PKE S17 S1 S 0 1 N N N -1.202 -7.944 24.680 4.860 -2.005 -0.457 S17 PKE 21 PKE C18 C15 C 0 1 N N N -3.388 -6.892 23.613 3.294 -1.224 1.605 C18 PKE 22 PKE O19 O1 O 0 1 N N N -1.274 -6.885 25.633 5.321 -1.241 -1.563 O19 PKE 23 PKE O21 O2 O 0 1 N N N 0.078 -8.359 24.206 3.767 -2.903 -0.592 O21 PKE 24 PKE C23 C16 C 0 1 Y N N -4.383 -1.870 20.572 -5.030 -0.221 1.263 C23 PKE 25 PKE C25 C17 C 0 1 Y N N -3.742 -4.074 21.318 -4.473 1.027 -0.713 C25 PKE 26 PKE C26 C18 C 0 1 Y N N -5.271 -2.773 22.609 -6.713 0.214 -0.399 C26 PKE 27 PKE C28 C19 C 0 1 N N N -6.086 -0.627 22.157 -7.553 -1.010 1.389 C28 PKE 28 PKE C29 C20 C 0 1 N N N -6.641 -1.160 23.459 -8.631 -0.750 0.358 C29 PKE 29 PKE N30 N7 N 0 1 N N N -6.124 -2.401 23.651 -8.067 -0.042 -0.635 N30 PKE 30 PKE O31 O3 O 0 1 N N N -7.418 -0.589 24.217 -9.787 -1.112 0.418 O31 PKE 31 PKE H1 H1 H 0 1 N N N 0.725 -6.811 22.236 2.765 1.896 -1.594 H1 PKE 32 PKE H2 H2 H 0 1 N N N -0.688 -5.751 21.909 3.012 0.153 -1.332 H2 PKE 33 PKE H3 H3 H 0 1 N N N -0.029 -8.250 19.341 4.261 3.494 -0.637 H3 PKE 34 PKE H4 H4 H 0 1 N N N -1.504 -10.197 18.963 6.369 3.901 0.617 H4 PKE 35 PKE H5 H5 H 0 1 N N N -3.179 -10.771 20.637 7.435 2.041 1.822 H5 PKE 36 PKE H6 H6 H 0 1 N N N -1.478 -9.703 26.228 5.901 -3.271 1.306 H6 PKE 37 PKE H7 H7 H 0 1 N N N -3.047 -9.063 25.632 6.668 -3.584 -0.269 H7 PKE 38 PKE H8 H8 H 0 1 N N N -2.060 -10.139 24.585 7.018 -2.075 0.608 H8 PKE 39 PKE H9 H9 H 0 1 N N N -4.624 -4.749 23.159 -6.059 1.341 -2.105 H9 PKE 40 PKE H10 H10 H 0 1 N N N 0.301 -3.906 16.374 -1.219 0.181 -3.168 H10 PKE 41 PKE H11 H11 H 0 1 N N N 1.502 -5.439 17.878 1.105 0.623 -2.426 H11 PKE 42 PKE H12 H12 H 0 1 N N N 0.883 -6.846 19.783 1.965 1.270 1.041 H12 PKE 43 PKE H13 H13 H 0 1 N N N -3.197 -2.572 18.481 -2.597 0.686 1.904 H13 PKE 44 PKE H14 H14 H 0 1 N N N -3.395 -6.361 24.576 2.310 -1.105 1.153 H14 PKE 45 PKE H15 H15 H 0 1 N N N -3.638 -6.189 22.805 3.427 -2.260 1.918 H15 PKE 46 PKE H16 H16 H 0 1 N N N -4.131 -7.703 23.636 3.377 -0.570 2.473 H16 PKE 47 PKE H17 H17 H 0 1 N N N -4.316 -1.069 19.851 -4.742 -0.659 2.207 H17 PKE 48 PKE H18 H18 H 0 1 N N N -3.173 -4.980 21.168 -3.748 1.562 -1.308 H18 PKE 49 PKE H19 H19 H 0 1 N N N -5.512 0.297 22.321 -7.386 -2.081 1.505 H19 PKE 50 PKE H20 H20 H 0 1 N N N -6.892 -0.435 21.434 -7.821 -0.558 2.344 H20 PKE 51 PKE H21 H21 H 0 1 N N N -6.329 -2.978 24.442 -8.544 0.257 -1.425 H21 PKE 52 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PKE C4 N3 DOUB Y N 1 PKE C4 C5 SING Y N 2 PKE N3 C2 SING Y N 3 PKE C5 C6 DOUB Y N 4 PKE C2 N8 SING N N 5 PKE C2 N1 DOUB Y N 6 PKE N8 C22 SING N N 7 PKE C6 N1 SING Y N 8 PKE C6 N7 SING N N 9 PKE C12 C11 DOUB Y N 10 PKE C12 C13 SING Y N 11 PKE C11 C10 SING Y N 12 PKE N7 C9 SING N N 13 PKE C22 C23 DOUB Y N 14 PKE C22 C25 SING Y N 15 PKE C23 C27 SING Y N 16 PKE C13 N14 DOUB Y N 17 PKE C10 C9 SING N N 18 PKE C10 C15 DOUB Y N 19 PKE C25 C24 DOUB Y N 20 PKE C27 C28 SING N N 21 PKE C27 C26 DOUB Y N 22 PKE N14 C15 SING Y N 23 PKE C15 N16 SING N N 24 PKE C28 C29 SING N N 25 PKE C24 C26 SING Y N 26 PKE C26 N30 SING N N 27 PKE N16 C18 SING N N 28 PKE N16 S17 SING N N 29 PKE C29 N30 SING N N 30 PKE C29 O31 DOUB N N 31 PKE O21 S17 DOUB N N 32 PKE S17 C20 SING N N 33 PKE S17 O19 DOUB N N 34 PKE C9 H1 SING N N 35 PKE C9 H2 SING N N 36 PKE C11 H3 SING N N 37 PKE C12 H4 SING N N 38 PKE C13 H5 SING N N 39 PKE C20 H6 SING N N 40 PKE C20 H7 SING N N 41 PKE C20 H8 SING N N 42 PKE C24 H9 SING N N 43 PKE C4 H10 SING N N 44 PKE C5 H11 SING N N 45 PKE N7 H12 SING N N 46 PKE N8 H13 SING N N 47 PKE C18 H14 SING N N 48 PKE C18 H15 SING N N 49 PKE C18 H16 SING N N 50 PKE C23 H17 SING N N 51 PKE C25 H18 SING N N 52 PKE C28 H19 SING N N 53 PKE C28 H20 SING N N 54 PKE N30 H21 SING N N 55 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PKE InChI InChI 1.03 "InChI=1S/C20H21N7O3S/c1-27(31(2,29)30)19-13(4-3-8-21-19)12-23-17-7-9-22-20(26-17)24-15-5-6-16-14(10-15)11-18(28)25-16/h3-10H,11-12H2,1-2H3,(H,25,28)(H2,22,23,24,26)" PKE InChIKey InChI 1.03 BTIZXJFJJCRTBP-UHFFFAOYSA-N PKE SMILES_CANONICAL CACTVS 3.385 "CN(c1ncccc1CNc2ccnc(Nc3ccc4NC(=O)Cc4c3)n2)[S](C)(=O)=O" PKE SMILES CACTVS 3.385 "CN(c1ncccc1CNc2ccnc(Nc3ccc4NC(=O)Cc4c3)n2)[S](C)(=O)=O" PKE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(c1c(cccn1)CNc2ccnc(n2)Nc3ccc4c(c3)CC(=O)N4)S(=O)(=O)C" PKE SMILES "OpenEye OEToolkits" 2.0.7 "CN(c1c(cccn1)CNc2ccnc(n2)Nc3ccc4c(c3)CC(=O)N4)S(=O)(=O)C" # _pdbx_chem_comp_identifier.comp_id PKE _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-methyl-~{N}-[3-[[[2-[(2-oxidanylidene-1,3-dihydroindol-5-yl)amino]pyrimidin-4-yl]amino]methyl]pyridin-2-yl]methanesulfonamide" # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PKE "Create component" 2020-04-24 PDBE PKE "Initial release" 2021-02-10 RCSB ##