data_PM6 # _chem_comp.id PM6 _chem_comp.name 9H-purine-6-thiol _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C5 H4 N4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms 6-Mercaptopurine _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2007-12-01 _chem_comp.pdbx_modified_date 2020-06-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 152.177 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PM6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 3BGD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PM6 N9 N9 N 0 1 Y N N -22.929 70.016 53.397 2.470 0.359 0.010 N9 PM6 1 PM6 C4 C4 C 0 1 Y N N -23.183 68.722 53.527 1.364 -0.454 0.005 C4 PM6 2 PM6 N3 N3 N 0 1 Y N N -24.164 67.924 53.080 1.165 -1.768 0.010 N3 PM6 3 PM6 C2 C2 C 0 1 Y N N -24.157 66.634 53.378 -0.055 -2.262 0.003 C2 PM6 4 PM6 N1 N1 N 0 1 Y N N -23.198 66.094 54.123 -1.130 -1.496 -0.011 N1 PM6 5 PM6 C6 C6 C 0 1 Y N N -22.192 66.840 54.596 -1.030 -0.170 -0.017 C6 PM6 6 PM6 C5 C5 C 0 1 Y N N -22.172 68.192 54.302 0.252 0.405 -0.009 C5 PM6 7 PM6 N7 N7 N 0 1 Y N N -21.340 69.177 54.613 0.728 1.673 -0.012 N7 PM6 8 PM6 C8 C8 C 0 1 Y N N -21.806 70.293 54.059 2.029 1.648 -0.001 C8 PM6 9 PM6 S6 S6 S 0 1 N N N -20.916 66.135 55.575 -2.472 0.843 -0.035 S6 PM6 10 PM6 HN9 HN9 H 0 1 N N N -23.485 70.673 52.889 3.395 0.068 0.022 HN9 PM6 11 PM6 H2 H2 H 0 1 N N N -24.951 66.004 53.006 -0.181 -3.335 0.007 H2 PM6 12 PM6 H8 H8 H 0 1 N N N -21.347 71.268 54.134 2.666 2.521 -0.000 H8 PM6 13 PM6 HS6 HS6 H 0 1 N N N -19.855 65.961 54.845 -2.685 0.991 1.351 HS6 PM6 14 # # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PM6 N9 C4 SING Y N 1 PM6 N9 C8 SING Y N 2 PM6 C4 N3 DOUB Y N 3 PM6 C4 C5 SING Y N 4 PM6 N3 C2 SING Y N 5 PM6 C2 N1 DOUB Y N 6 PM6 N1 C6 SING Y N 7 PM6 C6 C5 DOUB Y N 8 PM6 C6 S6 SING N N 9 PM6 C5 N7 SING Y N 10 PM6 N7 C8 DOUB Y N 11 PM6 N9 HN9 SING N N 12 PM6 C2 H2 SING N N 13 PM6 C8 H8 SING N N 14 PM6 S6 HS6 SING N N 15 # # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PM6 SMILES ACDLabs 10.04 "n2c1c(ncn1)c(nc2)S" PM6 SMILES_CANONICAL CACTVS 3.341 Sc1ncnc2[nH]cnc12 PM6 SMILES CACTVS 3.341 Sc1ncnc2[nH]cnc12 PM6 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "c1[nH]c2c(n1)c(ncn2)S" PM6 SMILES "OpenEye OEToolkits" 1.5.0 "c1[nH]c2c(n1)c(ncn2)S" PM6 InChI InChI 1.03 "InChI=1S/C5H4N4S/c10-5-3-4(7-1-6-3)8-2-9-5/h1-2H,(H2,6,7,8,9,10)" PM6 InChIKey InChI 1.03 GLVAUDGFNGKCSF-UHFFFAOYSA-N # # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PM6 "SYSTEMATIC NAME" ACDLabs 10.04 9H-purine-6-thiol PM6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 9H-purine-6-thiol # # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PM6 "Create component" 2007-12-01 RCSB PM6 "Modify aromatic_flag" 2011-06-04 RCSB PM6 "Modify descriptor" 2011-06-04 RCSB PM6 "Modify synonyms" 2020-06-05 PDBE # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id PM6 _pdbx_chem_comp_synonyms.name 6-Mercaptopurine _pdbx_chem_comp_synonyms.provenance ? _pdbx_chem_comp_synonyms.type ? ##