data_PML # _chem_comp.id PML _chem_comp.name "PIMELIC ACID" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H12 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2001-12-03 _chem_comp.pdbx_modified_date 2011-06-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 160.168 _chem_comp.one_letter_code ? _chem_comp.three_letter_code PML _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details ? _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 1KGT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal PML C1 C1 C 0 1 N N N 62.644 86.988 1.246 0.105 0.000 3.728 C1 PML 1 PML O11 O11 O 0 1 N N N 62.628 85.859 0.751 1.309 0.000 3.618 O11 PML 2 PML O12 O12 O 0 1 N N N 63.689 87.443 1.886 -0.455 0.000 4.948 O12 PML 3 PML C2 C2 C 0 1 N N N 61.376 87.819 1.223 -0.764 0.000 2.498 C2 PML 4 PML C3 C3 C 0 1 N N N 61.415 88.902 0.175 0.119 0.000 1.249 C3 PML 5 PML C4 C4 C 0 1 N N N 61.960 88.437 -1.164 -0.764 0.000 0.000 C4 PML 6 PML C5 C5 C 0 1 N N N 62.145 89.574 -2.180 0.119 0.000 -1.249 C5 PML 7 PML C6 C6 C 0 1 N N N 62.510 89.067 -3.577 -0.763 0.000 -2.498 C6 PML 8 PML C7 C7 C 0 1 N N N 62.480 90.122 -4.680 0.106 0.000 -3.728 C7 PML 9 PML O71 O71 O 0 1 N N N 62.194 89.786 -5.833 1.309 0.000 -3.618 O71 PML 10 PML O72 O72 O 0 1 N N N 62.782 91.369 -4.411 -0.455 0.000 -4.948 O72 PML 11 PML H12 H12 H 0 1 N N N 63.701 88.313 2.267 0.102 0.000 5.737 H12 PML 12 PML HC21 1HC2 H 0 0 N N N 60.475 87.173 1.099 -1.393 -0.890 2.498 HC21 PML 13 PML HC22 2HC2 H 0 0 N N N 61.155 88.243 2.230 -1.393 0.890 2.498 HC22 PML 14 PML HC31 1HC3 H 0 0 N N N 60.408 89.365 0.050 0.748 0.890 1.249 HC31 PML 15 PML HC32 2HC3 H 0 0 N N N 61.983 89.787 0.545 0.748 -0.890 1.249 HC32 PML 16 PML HC41 1HC4 H 0 0 N N N 62.911 87.871 -1.027 -1.393 -0.890 0.000 HC41 PML 17 PML HC42 2HC4 H 0 0 N N N 61.322 87.627 -1.589 -1.393 0.890 0.000 HC42 PML 18 PML HC51 1HC5 H 0 0 N N N 61.243 90.228 -2.215 0.748 0.890 -1.249 HC51 PML 19 PML HC52 2HC5 H 0 0 N N N 62.893 90.316 -1.816 0.748 -0.890 -1.249 HC52 PML 20 PML HC61 1HC6 H 0 0 N N N 63.504 88.563 -3.554 -1.393 -0.890 -2.498 HC61 PML 21 PML HC62 2HC6 H 0 0 N N N 61.860 88.204 -3.853 -1.393 0.890 -2.498 HC62 PML 22 PML H72 H72 H 0 1 N N N 62.763 92.025 -5.097 0.102 0.000 -5.737 H72 PML 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal PML C1 O11 DOUB N N 1 PML C1 O12 SING N N 2 PML C1 C2 SING N N 3 PML O12 H12 SING N N 4 PML C2 C3 SING N N 5 PML C2 HC21 SING N N 6 PML C2 HC22 SING N N 7 PML C3 C4 SING N N 8 PML C3 HC31 SING N N 9 PML C3 HC32 SING N N 10 PML C4 C5 SING N N 11 PML C4 HC41 SING N N 12 PML C4 HC42 SING N N 13 PML C5 C6 SING N N 14 PML C5 HC51 SING N N 15 PML C5 HC52 SING N N 16 PML C6 C7 SING N N 17 PML C6 HC61 SING N N 18 PML C6 HC62 SING N N 19 PML C7 O71 DOUB N N 20 PML C7 O72 SING N N 21 PML O72 H72 SING N N 22 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor PML SMILES ACDLabs 10.04 "O=C(O)CCCCCC(=O)O" PML SMILES_CANONICAL CACTVS 3.341 "OC(=O)CCCCCC(O)=O" PML SMILES CACTVS 3.341 "OC(=O)CCCCCC(O)=O" PML SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "C(CCC(=O)O)CCC(=O)O" PML SMILES "OpenEye OEToolkits" 1.5.0 "C(CCC(=O)O)CCC(=O)O" PML InChI InChI 1.03 "InChI=1S/C7H12O4/c8-6(9)4-2-1-3-5-7(10)11/h1-5H2,(H,8,9)(H,10,11)" PML InChIKey InChI 1.03 WLJVNTCWHIRURA-UHFFFAOYSA-N # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier PML "SYSTEMATIC NAME" ACDLabs 10.04 "heptanedioic acid" PML "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "heptanedioic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site PML "Create component" 2001-12-03 RCSB PML "Modify descriptor" 2011-06-04 RCSB #